RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 FAM161AQ3B820 660 aa28.91■■■□□ 2.22
LONRF3-204ENST00000439603 PRR5LQ6MZQ0 368 aa28.91■■■□□ 2.22
LONRF3-204ENST00000439603 MYH3P11055 1940 aa28.91■■■□□ 2.22
LONRF3-204ENST00000439603 LAMB2P55268 1798 aa28.9■■■□□ 2.22
LONRF3-204ENST00000439603 PTPN12Q05209 780 aaKnown RBP28.9■■■□□ 2.22
LONRF3-204ENST00000439603 ANKRD45Q5TZF3 282 aa28.9■■■□□ 2.22
LONRF3-204ENST00000439603 CCDC24Q8N4L8 307 aa28.9■■■□□ 2.22
LONRF3-204ENST00000439603 KLHDC4Q8TBB5 520 aa28.9■■■□□ 2.22
LONRF3-204ENST00000439603 COPRSQ9NQ92 184 aa28.9■■■□□ 2.22
LONRF3-204ENST00000439603 MMP10P09238 476 aa28.89■■■□□ 2.22
LONRF3-204ENST00000439603 NUCB1Q02818 461 aa28.89■■■□□ 2.22
LONRF3-204ENST00000439603 GREM2Q9H772 168 aa28.89■■■□□ 2.22
LONRF3-204ENST00000439603 IFIT5Q13325 482 aaKnown RBP28.89■■■□□ 2.21
LONRF3-204ENST00000439603 HSP90AB4PQ58FF6 505 aa28.89■■■□□ 2.21
LONRF3-204ENST00000439603 CCDC152Q4G0S7 254 aa28.88■■■□□ 2.21
LONRF3-204ENST00000439603 SLC16A10Q8TF71 515 aa28.88■■■□□ 2.21
LONRF3-204ENST00000439603 NLRP3Q96P20 1036 aa28.88■■■□□ 2.21
LONRF3-204ENST00000439603 PARP3Q9Y6F1 533 aa28.88■■■□□ 2.21
LONRF3-204ENST00000439603 APBB1O00213 710 aa28.87■■■□□ 2.21
LONRF3-204ENST00000439603 RAB11FIP3O75154 756 aa28.87■■■□□ 2.21
LONRF3-204ENST00000439603 ST5P78524 1137 aa28.87■■■□□ 2.21
LONRF3-204ENST00000439603 ITGA6P23229 1130 aa28.87■■■□□ 2.21
LONRF3-204ENST00000439603 SF3B3Q15393 1217 aaKnown RBP28.87■■■□□ 2.21
LONRF3-204ENST00000439603 G3BP1Q13283 466 aaKnown RBP eCLIP28.86■■■□□ 2.21
LONRF3-204ENST00000439603 C3orf67Q6ZVT6 689 aa28.86■■■□□ 2.21
LONRF3-204ENST00000439603 CHD1LQ86WJ1 897 aa28.86■■■□□ 2.21
LONRF3-204ENST00000439603 ANKRD18BA2A2Z9 1011 aa28.85■■■□□ 2.21
LONRF3-204ENST00000439603 SIL1Q9H173 461 aa28.85■■■□□ 2.21
LONRF3-204ENST00000439603 OS9Q13438 667 aaPredicted RBP28.85■■■□□ 2.21
LONRF3-204ENST00000439603 ZNF594Q96JF6 807 aaPredicted RBP28.85■■■□□ 2.21
LONRF3-204ENST00000439603 LRRCC1Q9C099 1032 aa28.84■■■□□ 2.21
LONRF3-204ENST00000439603 LNPKQ9C0E8 428 aa28.84■■■□□ 2.21
LONRF3-204ENST00000439603 ZBTB47Q9UFB7 747 aaPredicted RBP28.84■■■□□ 2.21
LONRF3-204ENST00000439603 RTL9Q8NET4 1388 aa28.83■■■□□ 2.21
LONRF3-204ENST00000439603 SKAP1Q86WV1 359 aa28.83■■■□□ 2.21
LONRF3-204ENST00000439603 RIC1Q4ADV7 1423 aa28.83■■■□□ 2.21
LONRF3-204ENST00000439603 R3HDM1Q15032 1099 aaKnown RBP28.83■■■□□ 2.2
LONRF3-204ENST00000439603 TAF7LQ5H9L4 462 aa28.83■■■□□ 2.2
LONRF3-204ENST00000439603 ERC1Q8IUD2 1116 aa28.83■■■□□ 2.2
LONRF3-204ENST00000439603 KIF1BPQ96EK5 621 aa28.83■■■□□ 2.2
LONRF3-204ENST00000439603 RHPN1Q8TCX5 695 aa28.82■■■□□ 2.2
LONRF3-204ENST00000439603 NRXN2Q9P2S2 1712 aa28.81■■■□□ 2.2
LONRF3-204ENST00000439603 SMARCA5O60264 1052 aaPredicted RBP28.81■■■□□ 2.2
LONRF3-204ENST00000439603 SEC31BQ9NQW1 1179 aa28.81■■■□□ 2.2
LONRF3-204ENST00000439603 FBXO3Q9UK99 471 aa28.8■■■□□ 2.2
LONRF3-204ENST00000439603 EYA2O00167 538 aa28.79■■■□□ 2.2
LONRF3-204ENST00000439603 CIAO1O76071 339 aa28.78■■■□□ 2.2
LONRF3-204ENST00000439603 SASH1O94885 1247 aa28.78■■■□□ 2.2
LONRF3-204ENST00000439603 TNRC6CQ9HCJ0 1690 aaKnown RBP28.78■■■□□ 2.2
LONRF3-204ENST00000439603 LRRC24Q50LG9 513 aa28.78■■■□□ 2.2
LONRF3-204ENST00000439603 ATG9AQ7Z3C6 839 aa28.77■■■□□ 2.2
LONRF3-204ENST00000439603 BRIP1Q9BX63 1249 aa28.77■■■□□ 2.2
LONRF3-204ENST00000439603 PUS3Q9BZE2 481 aaKnown RBP28.77■■■□□ 2.2
LONRF3-204ENST00000439603 BCL11AQ9H165 835 aa28.77■■■□□ 2.2
LONRF3-204ENST00000439603 PDE4AP27815 886 aa28.76■■■□□ 2.2
LONRF3-204ENST00000439603 IL15P40933 162 aaPredicted RBP28.76■■■□□ 2.2
LONRF3-204ENST00000439603 RGS3P49796 1198 aa28.76■■■□□ 2.2
LONRF3-204ENST00000439603 LDHAL6AQ6ZMR3 332 aa28.76■■■□□ 2.2
LONRF3-204ENST00000439603 CDC5LQ99459 802 aaKnown RBP28.76■■■□□ 2.2
LONRF3-204ENST00000439603 IL1RAPL2Q9NP60 686 aa28.76■■■□□ 2.2
LONRF3-204ENST00000439603 CASZ1Q86V15 1759 aa28.76■■■□□ 2.19
LONRF3-204ENST00000439603 CRY2Q49AN0 593 aa28.75■■■□□ 2.19
LONRF3-204ENST00000439603 KLRG2A4D1S0 409 aaPredicted RBP28.74■■■□□ 2.19
LONRF3-204ENST00000439603 ZBTB7AO95365 584 aa28.74■■■□□ 2.19
LONRF3-204ENST00000439603 IGHMBP2P38935 993 aaKnown RBP28.74■■■□□ 2.19
LONRF3-204ENST00000439603 DDX46Q7L014 1031 aaKnown RBP28.74■■■□□ 2.19
LONRF3-204ENST00000439603 C16orf71Q8IYS4 520 aaPredicted RBP28.74■■■□□ 2.19
LONRF3-204ENST00000439603 MPHOSPH8Q99549 860 aa28.74■■■□□ 2.19
LONRF3-204ENST00000439603 MTFR1LQ9H019 292 aa28.74■■■□□ 2.19
LONRF3-204ENST00000439603 CNNM1Q9NRU3 951 aa28.74■■■□□ 2.19
LONRF3-204ENST00000439603 PSDA5PKW4 1024 aaPredicted RBP28.73■■■□□ 2.19
LONRF3-204ENST00000439603 RIPOR2Q9Y4F9 1068 aa28.73■■■□□ 2.19
LONRF3-204ENST00000439603 TFCP2Q12800 502 aa28.72■■■□□ 2.19
LONRF3-204ENST00000439603 ANKRD18AQ8IVF6 992 aa28.72■■■□□ 2.19
LONRF3-204ENST00000439603 CLASRPQ8N2M8 674 aaKnown RBP28.72■■■□□ 2.19
LONRF3-204ENST00000439603 RPGRQ92834 1020 aaKnown RBP28.72■■■□□ 2.19
LONRF3-204ENST00000439603 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.72■■■□□ 2.19
LONRF3-204ENST00000439603 PDE6BP35913 854 aa28.71■■■□□ 2.19
LONRF3-204ENST00000439603 CELF1Q92879 486 aaKnown RBP28.71■■■□□ 2.19
LONRF3-204ENST00000439603 ANKRD31Q8N7Z5 1873 aa28.7■■■□□ 2.18
LONRF3-204ENST00000439603 RPS8P62241 208 aaKnown RBP28.7■■■□□ 2.18
LONRF3-204ENST00000439603 ATF5Q9Y2D1 282 aaPredicted RBP28.7■■■□□ 2.18
LONRF3-204ENST00000439603 LRP5O75197 1615 aa28.69■■■□□ 2.18
LONRF3-204ENST00000439603 RBM17Q96I25 401 aaKnown RBP28.69■■■□□ 2.18
LONRF3-204ENST00000439603 CEP126Q9P2H0 1117 aa28.69■■■□□ 2.18
LONRF3-204ENST00000439603 OTUD7AQ8TE49 926 aaPredicted RBP28.68■■■□□ 2.18
LONRF3-204ENST00000439603 COL4A1P02462 1669 aa28.68■■■□□ 2.18
LONRF3-204ENST00000439603 BSDC1Q9NW68 430 aaPredicted RBP28.68■■■□□ 2.18
LONRF3-204ENST00000439603 HOXA10P31260 410 aaPredicted RBP28.67■■■□□ 2.18
LONRF3-204ENST00000439603 GRAPQ13588 217 aa28.67■■■□□ 2.18
LONRF3-204ENST00000439603 METTL24Q5JXM2 366 aa28.67■■■□□ 2.18
LONRF3-204ENST00000439603 PLEKHM2Q8IWE5 1019 aa28.67■■■□□ 2.18
LONRF3-204ENST00000439603 GRAPLQ8TC17 118 aaPredicted RBP28.67■■■□□ 2.18
LONRF3-204ENST00000439603 MROH5Q6ZUA9 1318 aa28.67■■■□□ 2.18
LONRF3-204ENST00000439603 TAF1P21675 1872 aa28.66■■■□□ 2.18
LONRF3-204ENST00000439603 POLD1P28340 1107 aa28.66■■■□□ 2.18
LONRF3-204ENST00000439603 EAF2Q96CJ1 260 aaPredicted RBP28.66■■■□□ 2.18
LONRF3-204ENST00000439603 SRGNP10124 158 aa28.66■■■□□ 2.18
LONRF3-204ENST00000439603 TNNI3KQ59H18 835 aa28.66■■■□□ 2.18
LONRF3-204ENST00000439603 AACSQ86V21 672 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms