RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 DEF6Q9H4E7 631 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 SUFUQ9UMX1 484 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 ZNF518AQ6AHZ1 1483 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 LRRIQ1Q96JM4 1722 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 CD109Q6YHK3 1445 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 CCDC69A6NI79 296 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 PTGS1P23219 599 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 GSDMDP57764 484 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 IMMTQ16891 758 aaKnown RBP7.35□□□□□ -1.23
BDNF-211ENST00000439476 EXOC8Q8IYI6 725 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 PRPF38AQ8NAV1 312 aaKnown RBP7.35□□□□□ -1.23
BDNF-211ENST00000439476 EVI5LQ96CN4 794 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 U3KPZ7 1027 aaPredicted RBP7.35□□□□□ -1.23
BDNF-211ENST00000439476 TPD52L2O43399 206 aaKnown RBP7.35□□□□□ -1.23
BDNF-211ENST00000439476 TYRO3Q06418 890 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 FAM69CQ0P6D2 419 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 PROCA1Q8NCQ7 364 aaPredicted RBP7.35□□□□□ -1.23
BDNF-211ENST00000439476 SUDS3Q9H7L9 328 aaPredicted RBP7.35□□□□□ -1.23
BDNF-211ENST00000439476 ATP10AO60312 1499 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 BTBD11A6QL63 1104 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 EIF4A2Q14240 407 aaKnown RBP7.35□□□□□ -1.23
BDNF-211ENST00000439476 ZKSCAN8Q15776 578 aaPredicted RBP7.35□□□□□ -1.23
BDNF-211ENST00000439476 RPAINQ86UA6 219 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 KCNH5Q8NCM2 988 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 ACRBPQ8NEB7 543 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 CCDC148Q8NFR7 591 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 TCEANC2Q96MN5 208 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 ZNF287Q9HBT7 754 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 CEP126Q9P2H0 1117 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 POGZQ7Z3K3 1410 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 RBM5P52756 815 aaKnown RBP eCLIP7.34□□□□□ -1.23
BDNF-211ENST00000439476 SOGA3Q5TF21 947 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 CTR9Q6PD62 1173 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 TMCO3Q6UWJ1 677 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 TSC1Q92574 1164 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 INCENPQ9NQS7 918 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 AKAP2Q9Y2D5 859 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 TTC21BQ7Z4L5 1316 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 ICE2Q659A1 982 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 IRAK4Q9NWZ3 460 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 SAMD9LQ8IVG5 1584 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 FGFR1OPO95684 399 aaKnown RBP7.34□□□□□ -1.23
BDNF-211ENST00000439476 IL13P35225 146 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 STX1AQ16623 288 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 G2E3Q7L622 706 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 ZNF397Q8NF99 534 aaPredicted RBP7.34□□□□□ -1.23
BDNF-211ENST00000439476 RASSF4Q9H2L5 321 aa7.34□□□□□ -1.23
BDNF-211ENST00000439476 PI4KAP2A4QPH2 592 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 EPB41L2O43491 1005 aaKnown RBP7.33□□□□□ -1.24
BDNF-211ENST00000439476 KRT18P05783 430 aaKnown RBP7.33□□□□□ -1.24
BDNF-211ENST00000439476 PI4KAP1Q8N8J0 262 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 DNAJC25Q9H1X3 360 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 PIK3R4Q99570 1358 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 TTC37Q6PGP7 1564 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 GOLGA6CA6NDK9 693 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 GOLGA6BA6NDN3 693 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 RIOK3O14730 519 aaKnown RBP7.33□□□□□ -1.24
BDNF-211ENST00000439476 GOLGA6DP0CG33 693 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 CPA1P15085 419 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 DESP17661 470 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 ATP2B1P20020 1258 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 GUCY1B3Q02153 619 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 SPTY2D1Q68D10 685 aaPredicted RBP7.33□□□□□ -1.24
BDNF-211ENST00000439476 WWC2Q6AWC2 1192 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 TTLL5Q6EMB2 1281 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 LUZP1Q86V48 1076 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 FSIP1Q8NA03 581 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 CNNM1Q9NRU3 951 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 GOLGA6AQ9NYA3 693 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 RBM8AQ9Y5S9 174 aaKnown RBP7.33□□□□□ -1.24
BDNF-211ENST00000439476 URI1O94763 535 aaPredicted RBP7.33□□□□□ -1.24
BDNF-211ENST00000439476 ABCA8O94911 1581 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 SKILP12757 684 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 EZRP15311 586 aaKnown RBP7.33□□□□□ -1.24
BDNF-211ENST00000439476 TUBB4BP68371 445 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 CFAP100Q494V2 611 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 RBM26Q5T8P6 1007 aaKnown RBP7.33□□□□□ -1.24
BDNF-211ENST00000439476 CCDC171Q6TFL3 1326 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 KRT222Q8N1A0 295 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 NUCKS1Q9H1E3 243 aaKnown RBP7.33□□□□□ -1.24
BDNF-211ENST00000439476 RIMS2Q9UQ26 1411 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 SHROOM2Q13796 1616 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 MYL6BP14649 208 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 CETN2P41208 172 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 ARHGAP29Q52LW3 1261 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 DONSONQ9NYP3 566 aa7.33□□□□□ -1.24
BDNF-211ENST00000439476 NPHP3Q7Z494 1330 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 SNW1Q13573 536 aaKnown RBP7.32□□□□□ -1.24
BDNF-211ENST00000439476 AMOTQ4VCS5 1084 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 DNAJC14Q6Y2X3 702 aaPredicted RBP7.32□□□□□ -1.24
BDNF-211ENST00000439476 TSHZ1Q6ZSZ6 1077 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 SIRT2Q8IXJ6 389 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 UBAC1Q9BSL1 405 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 CHL1O00533 1208 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 LIG1P18858 919 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 JAKMIP3Q5VZ66 844 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 LARP1Q6PKG0 1096 aaKnown RBP7.32□□□□□ -1.24
BDNF-211ENST00000439476 GET4Q7L5D6 327 aaPredicted RBP7.32□□□□□ -1.24
BDNF-211ENST00000439476 USHBP1Q8N6Y0 703 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 TAF4BQ92750 862 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms