RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CLSPNQ9HAW4 1339 aa15.08■□□□□ 0
CSTF3-203ENST00000438862 PLCG2P16885 1265 aa15.07■□□□□ 0
CSTF3-203ENST00000438862 CDC37L1Q7L3B6 337 aa15.07■□□□□ 0
CSTF3-203ENST00000438862 NIM1KQ8IY84 436 aa15.07■□□□□ 0
CSTF3-203ENST00000438862 GLIS2Q9BZE0 524 aaPredicted RBP15.07■□□□□ 0
CSTF3-203ENST00000438862 VPS33BQ9H267 617 aa15.07■□□□□ 0
CSTF3-203ENST00000438862 COL4A5P29400 1685 aa15.06■□□□□ 0
CSTF3-203ENST00000438862 GNAT3A8MTJ3 354 aa15.06■□□□□ 0
CSTF3-203ENST00000438862 CRY2Q49AN0 593 aa15.06■□□□□ 0
CSTF3-203ENST00000438862 IL17REQ8NFR9 667 aa15.06■□□□□ 0
CSTF3-203ENST00000438862 ZNF408Q9H9D4 720 aa15.06■□□□□ 0
CSTF3-203ENST00000438862 FAM177BA6PVY3 158 aa15.05■□□□□ -0
CSTF3-203ENST00000438862 HOXA10P31260 410 aaPredicted RBP15.05■□□□□ -0
CSTF3-203ENST00000438862 NBPF15Q8N660 670 aa15.05■□□□□ -0
CSTF3-203ENST00000438862 SLAIN1Q8ND83 568 aa15.05■□□□□ -0
CSTF3-203ENST00000438862 ZIC5Q96T25 663 aa15.05■□□□□ -0
CSTF3-203ENST00000438862 USP16Q9Y5T5 823 aa15.05■□□□□ -0
CSTF3-203ENST00000438862 SIPA1L3O60292 1781 aaPredicted RBP15.04■□□□□ -0
CSTF3-203ENST00000438862 HUNKP57058 714 aa15.04■□□□□ -0
CSTF3-203ENST00000438862 RPGRQ92834 1020 aaKnown RBP15.04■□□□□ -0
CSTF3-203ENST00000438862 CCDC102AQ96A19 550 aa15.04■□□□□ -0
CSTF3-203ENST00000438862 NYXQ9GZU5 481 aa15.04■□□□□ -0
CSTF3-203ENST00000438862 CDHR2Q9BYE9 1310 aa15.03■□□□□ -0
CSTF3-203ENST00000438862 VASPP50552 380 aaPredicted RBP15.03■□□□□ -0
CSTF3-203ENST00000438862 RGMBQ6NW40 437 aa15.03■□□□□ -0
CSTF3-203ENST00000438862 CTU1Q7Z7A3 348 aaKnown RBP15.03■□□□□ -0
CSTF3-203ENST00000438862 GAS2L2Q8NHY3 880 aa15.03■□□□□ -0
CSTF3-203ENST00000438862 TMX4Q9H1E5 349 aaPredicted RBP15.03■□□□□ -0
CSTF3-203ENST00000438862 ZNRF3Q9ULT6 936 aa15.03■□□□□ -0
CSTF3-203ENST00000438862 NPC1L1Q9UHC9 1359 aa15.02■□□□□ -0
CSTF3-203ENST00000438862 KIF7Q2M1P5 1343 aa15.02■□□□□ -0
CSTF3-203ENST00000438862 BTBD11A6QL63 1104 aa15.02■□□□□ -0
CSTF3-203ENST00000438862 PPIP5K2O43314 1243 aa15.02■□□□□ -0
CSTF3-203ENST00000438862 TRPA1O75762 1119 aa15.02■□□□□ -0
CSTF3-203ENST00000438862 PIP4K2AP48426 406 aaPredicted RBP15.02■□□□□ -0
CSTF3-203ENST00000438862 CXCL9Q07325 125 aa15.02■□□□□ -0
CSTF3-203ENST00000438862 CRAMP1Q96RY5 1269 aa15.02■□□□□ -0
CSTF3-203ENST00000438862 RNF186Q9NXI6 227 aa15.02■□□□□ -0
CSTF3-203ENST00000438862 KNSTRNQ9Y448 316 aa15.02■□□□□ -0
CSTF3-203ENST00000438862 AKAP11Q9UKA4 1901 aa15.02□□□□□ -0.01
CSTF3-203ENST00000438862 FAM155AB1AL88 458 aaPredicted RBP15.01□□□□□ -0.01
CSTF3-203ENST00000438862 DIAPH1O60610 1272 aaKnown RBP15.01□□□□□ -0.01
CSTF3-203ENST00000438862 SNRPA1P09661 255 aaKnown RBP15.01□□□□□ -0.01
CSTF3-203ENST00000438862 GMPSP49915 693 aaPredicted RBP15.01□□□□□ -0.01
CSTF3-203ENST00000438862 PKN2Q16513 984 aaKnown RBP15.01□□□□□ -0.01
CSTF3-203ENST00000438862 RBM17Q96I25 401 aaKnown RBP15.01□□□□□ -0.01
CSTF3-203ENST00000438862 KCNQ3O43525 872 aa15□□□□□ -0.01
CSTF3-203ENST00000438862 HIRAP54198 1017 aaPredicted RBP15□□□□□ -0.01
CSTF3-203ENST00000438862 KIF23Q02241 960 aaPredicted RBP15□□□□□ -0.01
CSTF3-203ENST00000438862 TNIP1Q15025 636 aa15□□□□□ -0.01
CSTF3-203ENST00000438862 SUPT20HQ8NEM7 779 aa15□□□□□ -0.01
CSTF3-203ENST00000438862 BCL2L13Q9BXK5 485 aa15□□□□□ -0.01
CSTF3-203ENST00000438862 OCEL1Q9H607 264 aa15□□□□□ -0.01
CSTF3-203ENST00000438862 PPEF1O14829 653 aaPredicted RBP14.99□□□□□ -0.01
CSTF3-203ENST00000438862 HLFQ16534 295 aa14.99□□□□□ -0.01
CSTF3-203ENST00000438862 AOC3Q16853 763 aa14.99□□□□□ -0.01
CSTF3-203ENST00000438862 USP48Q86UV5 1035 aa14.99□□□□□ -0.01
CSTF3-203ENST00000438862 C2orf69Q8N8R5 385 aa14.99□□□□□ -0.01
CSTF3-203ENST00000438862 HPS5Q9UPZ3 1129 aa14.99□□□□□ -0.01
CSTF3-203ENST00000438862 CEMIPQ8WUJ3 1361 aa14.98□□□□□ -0.01
CSTF3-203ENST00000438862 H7C1D1 291 aa14.98□□□□□ -0.01
CSTF3-203ENST00000438862 NUTM1Q86Y26 1132 aa14.98□□□□□ -0.01
CSTF3-203ENST00000438862 CCER1Q8TC90 406 aaPredicted RBP14.98□□□□□ -0.01
CSTF3-203ENST00000438862 CNOT7Q9UIV1 285 aaKnown RBP14.98□□□□□ -0.01
CSTF3-203ENST00000438862 RIC1Q4ADV7 1423 aa14.98□□□□□ -0.01
CSTF3-203ENST00000438862 NBPF26B4DH59 902 aa14.97□□□□□ -0.01
CSTF3-203ENST00000438862 ST18O60284 1047 aa14.97□□□□□ -0.01
CSTF3-203ENST00000438862 ZNF157P51786 506 aaPredicted RBP14.97□□□□□ -0.01
CSTF3-203ENST00000438862 HABP4Q5JVS0 413 aaKnown RBP14.97□□□□□ -0.01
CSTF3-203ENST00000438862 NBPF10Q6P3W6 841 aaKnown RBP14.97□□□□□ -0.01
CSTF3-203ENST00000438862 RTFDC1Q9BY42 306 aaPredicted RBP14.97□□□□□ -0.01
CSTF3-203ENST00000438862 GBA2Q9HCG7 927 aaPredicted RBP14.97□□□□□ -0.01
CSTF3-203ENST00000438862 PRAMEF22A3QJZ6 481 aa14.96□□□□□ -0.01
CSTF3-203ENST00000438862 ERVV-1B6SEH8 477 aa14.96□□□□□ -0.01
CSTF3-203ENST00000438862 TCERG1O14776 1098 aaKnown RBP14.96□□□□□ -0.01
CSTF3-203ENST00000438862 CSRNP1Q96S65 589 aa14.96□□□□□ -0.01
CSTF3-203ENST00000438862 ATP6V0A2Q9Y487 856 aa14.96□□□□□ -0.01
CSTF3-203ENST00000438862 ABCC12Q96J65 1359 aa14.96□□□□□ -0.02
CSTF3-203ENST00000438862 TRPM4Q8TD43 1214 aa14.95□□□□□ -0.02
CSTF3-203ENST00000438862 IBTKQ9P2D0 1353 aaPredicted RBP14.95□□□□□ -0.02
CSTF3-203ENST00000438862 KRT26Q7Z3Y9 468 aa14.94□□□□□ -0.02
CSTF3-203ENST00000438862 HDAC9Q9UKV0 1011 aa14.94□□□□□ -0.02
CSTF3-203ENST00000438862 TIMELESSQ9UNS1 1208 aa14.94□□□□□ -0.02
CSTF3-203ENST00000438862 RAD17O75943 681 aa14.93□□□□□ -0.02
CSTF3-203ENST00000438862 SLC10A3P09131 477 aa14.93□□□□□ -0.02
CSTF3-203ENST00000438862 KIAA2012Q0VF49 1180 aa14.93□□□□□ -0.02
CSTF3-203ENST00000438862 AMER1Q5JTC6 1135 aaPredicted RBP14.93□□□□□ -0.02
CSTF3-203ENST00000438862 DPF2Q92785 391 aa14.93□□□□□ -0.02
CSTF3-203ENST00000438862 NUP98P52948 1817 aa14.92□□□□□ -0.02
CSTF3-203ENST00000438862 BBOX1O75936 387 aa14.92□□□□□ -0.02
CSTF3-203ENST00000438862 GSE1Q14687 1217 aa14.92□□□□□ -0.02
CSTF3-203ENST00000438862 DPP8Q6V1X1 898 aaPredicted RBP14.92□□□□□ -0.02
CSTF3-203ENST00000438862 MICALL2Q8IY33 904 aa14.92□□□□□ -0.02
CSTF3-203ENST00000438862 DCPSQ96C86 337 aaKnown RBP14.92□□□□□ -0.02
CSTF3-203ENST00000438862 NLRP3Q96P20 1036 aa14.92□□□□□ -0.02
CSTF3-203ENST00000438862 POLR2AP24928 1970 aaKnown RBP14.92□□□□□ -0.02
CSTF3-203ENST00000438862 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
CSTF3-203ENST00000438862 EIF4G2P78344 907 aaKnown RBP eCLIP14.91□□□□□ -0.02
CSTF3-203ENST00000438862 DLK2Q6UY11 383 aa14.91□□□□□ -0.02
CSTF3-203ENST00000438862 CDAN1Q8IWY9 1227 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms