RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 HFE2Q6ZVN8 426 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 KRTAP19-1Q8IUB9 90 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 PLEKHM2Q8IWE5 1019 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 POM121Q96HA1 1249 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 HINFPQ9BQA5 517 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 C2orf49Q9BVC5 232 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 KRTAP9-4Q9BYQ2 154 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 POM121CA8CG34 1229 aa5.71□□□□□ -1.5
HMGB1P12-201ENST00000438594 TGFBR3LH3BV60 316 aa5.71□□□□□ -1.5
HMGB1P12-201ENST00000438594 ALX3O95076 343 aa5.71□□□□□ -1.5
HMGB1P12-201ENST00000438594 HMGB1P09429 215 aaKnown RBP5.71□□□□□ -1.5
HMGB1P12-201ENST00000438594 RARAP10276 462 aa5.71□□□□□ -1.5
HMGB1P12-201ENST00000438594 EIF2AK2P19525 551 aaKnown RBP5.71□□□□□ -1.5
HMGB1P12-201ENST00000438594 FSTP19883 344 aa5.71□□□□□ -1.5
HMGB1P12-201ENST00000438594 POTEAQ6S8J7 498 aa5.71□□□□□ -1.5
HMGB1P12-201ENST00000438594 DHX32Q7L7V1 743 aaKnown RBP5.71□□□□□ -1.5
HMGB1P12-201ENST00000438594 SMG9Q9H0W8 520 aaKnown RBP5.71□□□□□ -1.5
HMGB1P12-201ENST00000438594 AKTIPQ9H8T0 292 aa5.71□□□□□ -1.5
HMGB1P12-201ENST00000438594 ATP9BO43861 1147 aa5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 PTCD1O75127 700 aaKnown RBP5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 COBLO75128 1261 aa5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 SASH3O75995 380 aa5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 HSP90B1P14625 803 aaKnown RBP5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 TARSP26639 723 aaKnown RBP5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 IDH3AP50213 366 aa5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 IRAK1P51617 712 aa5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 GRIK5Q16478 980 aa5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 RTN1Q16799 776 aa5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 HDGFL1Q5TGJ6 251 aa5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 SIX5Q8N196 739 aa5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 GAS2L2Q8NHY3 880 aa5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 FRRS1LQ9P0K9 344 aa5.7□□□□□ -1.5
HMGB1P12-201ENST00000438594 ZBTB42B2RXF5 422 aa5.69□□□□□ -1.5
HMGB1P12-201ENST00000438594 ARID4AP29374 1257 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P12-201ENST00000438594 TXKP42681 527 aa5.69□□□□□ -1.5
HMGB1P12-201ENST00000438594 IER5Q5VY09 327 aa5.69□□□□□ -1.5
HMGB1P12-201ENST00000438594 CHMP4AQ9BY43 222 aa5.69□□□□□ -1.5
HMGB1P12-201ENST00000438594 KLK14Q9P0G3 267 aa5.69□□□□□ -1.5
HMGB1P12-201ENST00000438594 ZFATQ9P243 1243 aa5.69□□□□□ -1.5
HMGB1P12-201ENST00000438594 DEAF1O75398 565 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P12-201ENST00000438594 GLB1P16278 677 aa5.68□□□□□ -1.5
HMGB1P12-201ENST00000438594 SEC13P55735 322 aa5.68□□□□□ -1.5
HMGB1P12-201ENST00000438594 GDF6Q6KF10 455 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P12-201ENST00000438594 ILDR2Q71H61 639 aa5.68□□□□□ -1.5
HMGB1P12-201ENST00000438594 STAG2Q8N3U4 1231 aa5.68□□□□□ -1.5
HMGB1P12-201ENST00000438594 TRPM4Q8TD43 1214 aa5.68□□□□□ -1.5
HMGB1P12-201ENST00000438594 ADAMTS19Q8TE59 1207 aa5.68□□□□□ -1.5
HMGB1P12-201ENST00000438594 IFT43Q96FT9 208 aa5.68□□□□□ -1.5
HMGB1P12-201ENST00000438594 BCS1LQ9Y276 419 aa5.68□□□□□ -1.5
HMGB1P12-201ENST00000438594 COL17A1Q9UMD9 1497 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P12-201ENST00000438594 MAP3K6O95382 1288 aa5.67□□□□□ -1.5
HMGB1P12-201ENST00000438594 ARSDP51689 593 aa5.67□□□□□ -1.5
HMGB1P12-201ENST00000438594 GPLD1P80108 840 aa5.67□□□□□ -1.5
HMGB1P12-201ENST00000438594 DGKZQ13574 1117 aa5.67□□□□□ -1.5
HMGB1P12-201ENST00000438594 PUS7Q96PZ0 661 aaKnown RBP5.67□□□□□ -1.5
HMGB1P12-201ENST00000438594 UCN2Q96RP3 112 aa5.67□□□□□ -1.5
HMGB1P12-201ENST00000438594 MRPL18Q9H0U6 180 aaKnown RBP5.67□□□□□ -1.5
HMGB1P12-201ENST00000438594 DMGDHQ9UI17 866 aaKnown RBP5.67□□□□□ -1.5
HMGB1P12-201ENST00000438594 J3QW42 95 aa5.66□□□□□ -1.5
HMGB1P12-201ENST00000438594 DLL1O00548 723 aa5.66□□□□□ -1.5
HMGB1P12-201ENST00000438594 GHRHP01286 108 aa5.66□□□□□ -1.5
HMGB1P12-201ENST00000438594 GRNP28799 593 aaKnown RBP5.66□□□□□ -1.5
HMGB1P12-201ENST00000438594 LARP1Q6PKG0 1096 aaKnown RBP5.66□□□□□ -1.5
HMGB1P12-201ENST00000438594 AGGF1Q8N302 714 aaeCLIP5.66□□□□□ -1.5
HMGB1P12-201ENST00000438594 IL22RA1Q8N6P7 574 aa5.66□□□□□ -1.5
HMGB1P12-201ENST00000438594 VTI1AQ96AJ9 217 aa5.66□□□□□ -1.5
HMGB1P12-201ENST00000438594 USP20Q9Y2K6 914 aa5.66□□□□□ -1.5
HMGB1P12-201ENST00000438594 ARID3CA6NKF2 412 aa5.65□□□□□ -1.5
HMGB1P12-201ENST00000438594 F8W735 103 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P12-201ENST00000438594 YBX3P16989 372 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB1P12-201ENST00000438594 INPP5BP32019 993 aa5.65□□□□□ -1.5
HMGB1P12-201ENST00000438594 DZIP1LQ8IYY4 767 aaKnown RBP5.65□□□□□ -1.5
HMGB1P12-201ENST00000438594 RGS22Q8NE09 1264 aa5.65□□□□□ -1.5
HMGB1P12-201ENST00000438594 TTC9Q92623 222 aa5.65□□□□□ -1.5
HMGB1P12-201ENST00000438594 PLD4Q96BZ4 506 aa5.65□□□□□ -1.5
HMGB1P12-201ENST00000438594 RBSNQ9H1K0 784 aa5.65□□□□□ -1.5
HMGB1P12-201ENST00000438594 RAXQ9Y2V3 346 aa5.65□□□□□ -1.5
HMGB1P12-201ENST00000438594 MICAL2O94851 1124 aa5.64□□□□□ -1.51
HMGB1P12-201ENST00000438594 DKK1O94907 266 aa5.64□□□□□ -1.51
HMGB1P12-201ENST00000438594 TGFB1P01137 390 aa5.64□□□□□ -1.51
HMGB1P12-201ENST00000438594 TAL1P17542 331 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P12-201ENST00000438594 SLC51AQ86UW1 340 aa5.64□□□□□ -1.51
HMGB1P12-201ENST00000438594 CMTR1Q8N1G2 835 aaKnown RBP5.64□□□□□ -1.51
HMGB1P12-201ENST00000438594 NSUN5Q96P11 429 aaKnown RBP5.64□□□□□ -1.51
HMGB1P12-201ENST00000438594 STOML1Q9UBI4 398 aa5.64□□□□□ -1.51
HMGB1P12-201ENST00000438594 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
HMGB1P12-201ENST00000438594 GSC2O15499 205 aa5.63□□□□□ -1.51
HMGB1P12-201ENST00000438594 IGLV1-40P01703 118 aa5.63□□□□□ -1.51
HMGB1P12-201ENST00000438594 PSAPP07602 524 aa5.63□□□□□ -1.51
HMGB1P12-201ENST00000438594 CD97P48960 835 aa5.63□□□□□ -1.51
HMGB1P12-201ENST00000438594 NRLP54845 237 aa5.63□□□□□ -1.51
HMGB1P12-201ENST00000438594 GP2P55259 537 aaKnown RBP5.63□□□□□ -1.51
HMGB1P12-201ENST00000438594 DPYDQ12882 1025 aa5.63□□□□□ -1.51
HMGB1P12-201ENST00000438594 TLR7Q9NYK1 1049 aaKnown RBP5.63□□□□□ -1.51
HMGB1P12-201ENST00000438594 TFIP11Q9UBB9 837 aaKnown RBP5.63□□□□□ -1.51
HMGB1P12-201ENST00000438594 RNF114Q9Y508 228 aa5.63□□□□□ -1.51
HMGB1P12-201ENST00000438594 OAS3Q9Y6K5 1087 aaKnown RBP5.63□□□□□ -1.51
HMGB1P12-201ENST00000438594 LOC102724428A0A0B4J2F2 783 aa5.62□□□□□ -1.51
HMGB1P12-201ENST00000438594 XYLBO75191 536 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms