RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.86□□□□□ -0.99
SPEN-202ENST00000438066 NOP9Q86U38 636 aaKnown RBP8.86□□□□□ -0.99
SPEN-202ENST00000438066 ZNF654Q8IZM8 581 aa8.86□□□□□ -0.99
SPEN-202ENST00000438066 ZNF295-AS1Q8N0V1 137 aa8.86□□□□□ -0.99
SPEN-202ENST00000438066 FRMD6Q96NE9 622 aa8.86□□□□□ -0.99
SPEN-202ENST00000438066 HFM1A2PYH4 1435 aa8.86□□□□□ -0.99
SPEN-202ENST00000438066 MAPKBP1O60336 1514 aa8.86□□□□□ -0.99
SPEN-202ENST00000438066 CD2BP2O95400 341 aaKnown RBP8.85□□□□□ -0.99
SPEN-202ENST00000438066 ADH1AP07327 375 aa8.85□□□□□ -0.99
SPEN-202ENST00000438066 NCLP19338 710 aaKnown RBP8.85□□□□□ -0.99
SPEN-202ENST00000438066 RPIAP49247 311 aa8.85□□□□□ -0.99
SPEN-202ENST00000438066 KDF1Q8NAX2 398 aaPredicted RBP8.85□□□□□ -0.99
SPEN-202ENST00000438066 FHDC1Q9C0D6 1143 aaPredicted RBP8.85□□□□□ -0.99
SPEN-202ENST00000438066 DNMT1P26358 1616 aaKnown RBP8.85□□□□□ -0.99
SPEN-202ENST00000438066 ATP10BO94823 1461 aa8.85□□□□□ -0.99
SPEN-202ENST00000438066 PI16Q6UXB8 463 aa8.85□□□□□ -0.99
SPEN-202ENST00000438066 HS2ST1Q7LGA3 356 aa8.85□□□□□ -0.99
SPEN-202ENST00000438066 ARMC5Q96C12 935 aa8.85□□□□□ -0.99
SPEN-202ENST00000438066 CDC42BPAQ5VT25 1732 aa8.84□□□□□ -0.99
SPEN-202ENST00000438066 PTPRGP23470 1445 aa8.84□□□□□ -0.99
SPEN-202ENST00000438066 AKNAQ7Z591 1439 aa8.84□□□□□ -0.99
SPEN-202ENST00000438066 MEN1O00255 615 aa8.84□□□□□ -0.99
SPEN-202ENST00000438066 CPNE3O75131 537 aaKnown RBP8.84□□□□□ -0.99
SPEN-202ENST00000438066 GGCXP38435 758 aa8.84□□□□□ -0.99
SPEN-202ENST00000438066 CBLBQ13191 982 aa8.84□□□□□ -0.99
SPEN-202ENST00000438066 DNAJC25Q9H1X3 360 aa8.84□□□□□ -0.99
SPEN-202ENST00000438066 GGT7Q9UJ14 662 aa8.84□□□□□ -0.99
SPEN-202ENST00000438066 BCS1LQ9Y276 419 aa8.84□□□□□ -0.99
SPEN-202ENST00000438066 NEFLP07196 543 aa8.83□□□□□ -1
SPEN-202ENST00000438066 ZNF662Q6ZS27 426 aa8.83□□□□□ -1
SPEN-202ENST00000438066 HIRIP3Q9BW71 556 aaPredicted RBP8.83□□□□□ -1
SPEN-202ENST00000438066 TMA7Q9Y2S6 64 aaKnown RBP8.83□□□□□ -1
SPEN-202ENST00000438066 ABCC2Q92887 1545 aa8.83□□□□□ -1
SPEN-202ENST00000438066 CROCC2H7BZ55 1655 aa8.83□□□□□ -1
SPEN-202ENST00000438066 TXLNAP40222 546 aa8.83□□□□□ -1
SPEN-202ENST00000438066 KCNC4Q03721 635 aa8.83□□□□□ -1
SPEN-202ENST00000438066 MEI1Q5TIA1 1274 aa8.83□□□□□ -1
SPEN-202ENST00000438066 USPL1Q5W0Q7 1092 aa8.83□□□□□ -1
SPEN-202ENST00000438066 PPP1R18Q6NYC8 613 aa8.83□□□□□ -1
SPEN-202ENST00000438066 NLRP3Q96P20 1036 aa8.83□□□□□ -1
SPEN-202ENST00000438066 NIFKQ9BYG3 293 aaKnown RBP8.83□□□□□ -1
SPEN-202ENST00000438066 OSBPL7Q9BZF2 842 aa8.83□□□□□ -1
SPEN-202ENST00000438066 SRA1Q9HD15 236 aaKnown RBP8.83□□□□□ -1
SPEN-202ENST00000438066 ABCC10Q5T3U5 1492 aa8.82□□□□□ -1
SPEN-202ENST00000438066 NAIPQ13075 1403 aa8.82□□□□□ -1
SPEN-202ENST00000438066 IRS1P35568 1242 aa8.82□□□□□ -1
SPEN-202ENST00000438066 EPS8L3Q8TE67 593 aaKnown RBP8.82□□□□□ -1
SPEN-202ENST00000438066 ZSCAN10Q96SZ4 725 aaPredicted RBP8.82□□□□□ -1
SPEN-202ENST00000438066 PIF1Q9H611 641 aa8.82□□□□□ -1
SPEN-202ENST00000438066 C12orf49Q9H741 205 aa8.82□□□□□ -1
SPEN-202ENST00000438066 ZSWIM4Q9H7M6 989 aa8.82□□□□□ -1
SPEN-202ENST00000438066 UACAQ9BZF9 1416 aa8.82□□□□□ -1
SPEN-202ENST00000438066 GPATCH8Q9UKJ3 1502 aaKnown RBP8.81□□□□□ -1
SPEN-202ENST00000438066 TMEM214Q6NUQ4 689 aaKnown RBP8.81□□□□□ -1
SPEN-202ENST00000438066 MRGPRX2Q96LB1 330 aa8.81□□□□□ -1
SPEN-202ENST00000438066 AGBL1Q96MI9 1066 aa8.81□□□□□ -1
SPEN-202ENST00000438066 FOXD3Q9UJU5 478 aaPredicted RBP8.81□□□□□ -1
SPEN-202ENST00000438066 CAMSAP2Q08AD1 1489 aa8.8□□□□□ -1
SPEN-202ENST00000438066 MICAL2O94851 1124 aa8.8□□□□□ -1
SPEN-202ENST00000438066 PTPN12Q05209 780 aaKnown RBP8.8□□□□□ -1
SPEN-202ENST00000438066 RBL2Q08999 1139 aa8.8□□□□□ -1
SPEN-202ENST00000438066 VPS37DQ86XT2 251 aa8.8□□□□□ -1
SPEN-202ENST00000438066 MCF2L2Q86YR7 1114 aa8.8□□□□□ -1
SPEN-202ENST00000438066 CCDC74AQ96AQ1 378 aa8.8□□□□□ -1
SPEN-202ENST00000438066 FAM13BQ9NYF5 915 aa8.8□□□□□ -1
SPEN-202ENST00000438066 ADGBQ8N7X0 1667 aa8.8□□□□□ -1
SPEN-202ENST00000438066 TLDC2A0PJX2 215 aa8.8□□□□□ -1
SPEN-202ENST00000438066 RPLP1P05386 114 aaKnown RBP8.8□□□□□ -1
SPEN-202ENST00000438066 DAPK1P53355 1430 aa8.8□□□□□ -1
SPEN-202ENST00000438066 C1orf53Q5VUE5 145 aa8.8□□□□□ -1
SPEN-202ENST00000438066 ANKRD13AQ8IZ07 590 aa8.8□□□□□ -1
SPEN-202ENST00000438066 USP31Q70CQ4 1352 aa8.79□□□□□ -1
SPEN-202ENST00000438066 PREX2Q70Z35 1606 aa8.79□□□□□ -1
SPEN-202ENST00000438066 UHRF1BP1LA0JNW5 1464 aa8.79□□□□□ -1
SPEN-202ENST00000438066 TNFRSF21O75509 655 aa8.79□□□□□ -1
SPEN-202ENST00000438066 PTGIRP43119 386 aa8.79□□□□□ -1
SPEN-202ENST00000438066 RELBQ01201 579 aa8.79□□□□□ -1
SPEN-202ENST00000438066 TAF1CQ15572 869 aaPredicted RBP8.79□□□□□ -1
SPEN-202ENST00000438066 ZNF395Q9H8N7 513 aaPredicted RBP8.79□□□□□ -1
SPEN-202ENST00000438066 USP20Q9Y2K6 914 aa8.79□□□□□ -1
SPEN-202ENST00000438066 NNTQ13423 1086 aa8.78□□□□□ -1
SPEN-202ENST00000438066 LIAT1Q6ZQX7 453 aa8.78□□□□□ -1
SPEN-202ENST00000438066 RHPN1Q8TCX5 695 aa8.78□□□□□ -1
SPEN-202ENST00000438066 RHBDD1Q8TEB9 315 aa8.78□□□□□ -1
SPEN-202ENST00000438066 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.78□□□□□ -1
SPEN-202ENST00000438066 V9GY48 417 aaPredicted RBP8.78□□□□□ -1
SPEN-202ENST00000438066 KDM6BO15054 1643 aa8.78□□□□□ -1
SPEN-202ENST00000438066 ZCCHC11Q5TAX3 1644 aaKnown RBP8.78□□□□□ -1
SPEN-202ENST00000438066 CDC42BPBQ9Y5S2 1711 aa8.78□□□□□ -1
SPEN-202ENST00000438066 ABCC5O15440 1437 aa8.78□□□□□ -1
SPEN-202ENST00000438066 STK10O94804 968 aaKnown RBP8.77□□□□□ -1
SPEN-202ENST00000438066 GTF2E1P29083 439 aaPredicted RBP8.77□□□□□ -1
SPEN-202ENST00000438066 PLA2G4AP47712 749 aa8.77□□□□□ -1
SPEN-202ENST00000438066 AIDAQ96BJ3 306 aa8.77□□□□□ -1
SPEN-202ENST00000438066 KLRG1Q96E93 195 aa8.77□□□□□ -1
SPEN-202ENST00000438066 ROCK1Q13464 1354 aa8.77□□□□□ -1.01
SPEN-202ENST00000438066 WNT7AO00755 349 aa8.77□□□□□ -1.01
SPEN-202ENST00000438066 ALDH1A1P00352 501 aa8.77□□□□□ -1.01
SPEN-202ENST00000438066 FGRP09769 529 aa8.77□□□□□ -1.01
SPEN-202ENST00000438066 USP17L7P0C7H9 530 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms