RNA–Protein interactions for RNA: ENST00000437892.1

LINC00858-202, long intergenic non-protein coding RNA 858, humanhuman

TSL 3

Gene LINC00858, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-202ENST00000437892 ATP5J2-PTCD1G3V325 749 aa11.81□□□□□ -0.52
LINC00858-202ENST00000437892 PCCAP05165 728 aaPredicted RBP11.81□□□□□ -0.52
LINC00858-202ENST00000437892 GSPT1P15170 499 aaKnown RBP11.81□□□□□ -0.52
LINC00858-202ENST00000437892 SEPT12Q8IYM1 358 aa11.81□□□□□ -0.52
LINC00858-202ENST00000437892 RHPN1Q8TCX5 695 aa11.81□□□□□ -0.52
LINC00858-202ENST00000437892 OCEL1Q9H607 264 aa11.81□□□□□ -0.52
LINC00858-202ENST00000437892 LAMB2P55268 1798 aa11.81□□□□□ -0.52
LINC00858-202ENST00000437892 LRP5O75197 1615 aa11.81□□□□□ -0.52
LINC00858-202ENST00000437892 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
LINC00858-202ENST00000437892 SMARCA5O60264 1052 aaPredicted RBP11.8□□□□□ -0.52
LINC00858-202ENST00000437892 MX1P20591 662 aa11.8□□□□□ -0.52
LINC00858-202ENST00000437892 RFX5P48382 616 aaPredicted RBP11.8□□□□□ -0.52
LINC00858-202ENST00000437892 PDE1AP54750 535 aa11.8□□□□□ -0.52
LINC00858-202ENST00000437892 FOXO4P98177 505 aa11.8□□□□□ -0.52
LINC00858-202ENST00000437892 EPHA10Q5JZY3 1008 aa11.8□□□□□ -0.52
LINC00858-202ENST00000437892 RC3H1Q5TC82 1133 aaKnown RBP11.8□□□□□ -0.52
LINC00858-202ENST00000437892 ZNF772Q68DY9 489 aaPredicted RBP11.8□□□□□ -0.52
LINC00858-202ENST00000437892 DZIP3Q86Y13 1208 aaKnown RBP11.8□□□□□ -0.52
LINC00858-202ENST00000437892 OTUD7AQ8TE49 926 aaPredicted RBP11.8□□□□□ -0.52
LINC00858-202ENST00000437892 QTRT2Q9H974 415 aaKnown RBP11.8□□□□□ -0.52
LINC00858-202ENST00000437892 NUP98P52948 1817 aa11.8□□□□□ -0.52
LINC00858-202ENST00000437892 TAF1LQ8IZX4 1826 aa11.79□□□□□ -0.52
LINC00858-202ENST00000437892 CDC45O75419 566 aa11.79□□□□□ -0.52
LINC00858-202ENST00000437892 SEC24BO95487 1268 aa11.79□□□□□ -0.52
LINC00858-202ENST00000437892 MKRN3Q13064 507 aaKnown RBP11.79□□□□□ -0.52
LINC00858-202ENST00000437892 NPM2Q86SE8 214 aaKnown RBP11.79□□□□□ -0.52
LINC00858-202ENST00000437892 NLRP10Q86W26 655 aa11.79□□□□□ -0.52
LINC00858-202ENST00000437892 ZNF34Q8IZ26 560 aa11.79□□□□□ -0.52
LINC00858-202ENST00000437892 ZBTB38Q8NAP3 1195 aaPredicted RBP11.79□□□□□ -0.52
LINC00858-202ENST00000437892 AK7Q96M32 723 aa11.79□□□□□ -0.52
LINC00858-202ENST00000437892 UPF2Q9HAU5 1272 aaKnown RBP11.79□□□□□ -0.52
LINC00858-202ENST00000437892 TTC41PQ6P2S7 1318 aa11.79□□□□□ -0.52
LINC00858-202ENST00000437892 STK25O00506 426 aa11.78□□□□□ -0.52
LINC00858-202ENST00000437892 CAMTA2O94983 1202 aa11.78□□□□□ -0.52
LINC00858-202ENST00000437892 C16orf71Q8IYS4 520 aaPredicted RBP11.78□□□□□ -0.52
LINC00858-202ENST00000437892 LINC00116Q8NCU8 138 aa11.78□□□□□ -0.52
LINC00858-202ENST00000437892 BRWD3Q6RI45 1802 aa11.78□□□□□ -0.52
LINC00858-202ENST00000437892 C4BP0C0L5 1744 aa11.77□□□□□ -0.52
LINC00858-202ENST00000437892 COL24A1Q17RW2 1714 aa11.77□□□□□ -0.52
LINC00858-202ENST00000437892 APBB1O00213 710 aa11.77□□□□□ -0.53
LINC00858-202ENST00000437892 HMGB2P26583 209 aaKnown RBP11.77□□□□□ -0.53
LINC00858-202ENST00000437892 RBM6P78332 1123 aaKnown RBP11.77□□□□□ -0.53
LINC00858-202ENST00000437892 PTPN12Q05209 780 aaKnown RBP11.77□□□□□ -0.53
LINC00858-202ENST00000437892 OS9Q13438 667 aaPredicted RBP11.77□□□□□ -0.53
LINC00858-202ENST00000437892 HLFQ16534 295 aa11.77□□□□□ -0.53
LINC00858-202ENST00000437892 PARP10Q53GL7 1025 aa11.77□□□□□ -0.53
LINC00858-202ENST00000437892 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.53
LINC00858-202ENST00000437892 CLEC4GQ6UXB4 293 aa11.77□□□□□ -0.53
LINC00858-202ENST00000437892 FAM196AQ6ZSG2 479 aa11.77□□□□□ -0.53
LINC00858-202ENST00000437892 CLASRPQ8N2M8 674 aaKnown RBP11.77□□□□□ -0.53
LINC00858-202ENST00000437892 TBC1D32Q96NH3 1257 aa11.77□□□□□ -0.53
LINC00858-202ENST00000437892 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
LINC00858-202ENST00000437892 ZNF330Q9Y3S2 320 aaPredicted RBP11.77□□□□□ -0.53
LINC00858-202ENST00000437892 STK24Q9Y6E0 443 aa11.77□□□□□ -0.53
LINC00858-202ENST00000437892 CIAO1O76071 339 aa11.76□□□□□ -0.53
LINC00858-202ENST00000437892 PLCG2P16885 1265 aa11.76□□□□□ -0.53
LINC00858-202ENST00000437892 G3BP1Q13283 466 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00858-202ENST00000437892 LMBR1LQ6UX01 489 aa11.76□□□□□ -0.53
LINC00858-202ENST00000437892 TBC1D9Q6ZT07 1266 aa11.76□□□□□ -0.53
LINC00858-202ENST00000437892 KRT27Q7Z3Y8 459 aa11.76□□□□□ -0.53
LINC00858-202ENST00000437892 MS4A4AQ96JQ5 239 aa11.76□□□□□ -0.53
LINC00858-202ENST00000437892 PA2G4Q9UQ80 394 aaKnown RBP11.76□□□□□ -0.53
LINC00858-202ENST00000437892 ZNF652Q9Y2D9 606 aa11.76□□□□□ -0.53
LINC00858-202ENST00000437892 UBN2Q6ZU65 1347 aa11.76□□□□□ -0.53
LINC00858-202ENST00000437892 RGPD3A6NKT7 1758 aaPredicted RBP11.76□□□□□ -0.53
LINC00858-202ENST00000437892 RGPD4Q7Z3J3 1758 aa11.76□□□□□ -0.53
LINC00858-202ENST00000437892 MYH3P11055 1940 aa11.76□□□□□ -0.53
LINC00858-202ENST00000437892 KAT6BQ8WYB5 2073 aa11.75□□□□□ -0.53
LINC00858-202ENST00000437892 SASH1O94885 1247 aa11.75□□□□□ -0.53
LINC00858-202ENST00000437892 CSF1RP07333 972 aa11.75□□□□□ -0.53
LINC00858-202ENST00000437892 HSP90B1P14625 803 aaKnown RBP11.75□□□□□ -0.53
LINC00858-202ENST00000437892 SDSP20132 328 aa11.75□□□□□ -0.53
LINC00858-202ENST00000437892 PTF1AQ7RTS3 328 aa11.75□□□□□ -0.53
LINC00858-202ENST00000437892 HS6ST3Q8IZP7 471 aa11.75□□□□□ -0.53
LINC00858-202ENST00000437892 PI4K2BQ8TCG2 481 aa11.75□□□□□ -0.53
LINC00858-202ENST00000437892 DDRGK1Q96HY6 314 aa11.75□□□□□ -0.53
LINC00858-202ENST00000437892 GPATCH3Q96I76 525 aa11.75□□□□□ -0.53
LINC00858-202ENST00000437892 IL1RAPL2Q9NP60 686 aa11.75□□□□□ -0.53
LINC00858-202ENST00000437892 RTL9Q8NET4 1388 aa11.75□□□□□ -0.53
LINC00858-202ENST00000437892 C4AP0C0L4 1744 aa11.74□□□□□ -0.53
LINC00858-202ENST00000437892 RPS6KA4O75676 772 aa11.74□□□□□ -0.53
LINC00858-202ENST00000437892 GLRX3O76003 335 aaKnown RBP11.74□□□□□ -0.53
LINC00858-202ENST00000437892 CASC1Q6TDU7 716 aa11.74□□□□□ -0.53
LINC00858-202ENST00000437892 IPO9Q96P70 1041 aaKnown RBP11.74□□□□□ -0.53
LINC00858-202ENST00000437892 GPR108Q9NPR9 543 aa11.74□□□□□ -0.53
LINC00858-202ENST00000437892 CCNL1Q9UK58 526 aaPredicted RBP11.74□□□□□ -0.53
LINC00858-202ENST00000437892 TBC1D2BQ9UPU7 963 aa11.74□□□□□ -0.53
LINC00858-202ENST00000437892 ZNF609O15014 1411 aa11.73□□□□□ -0.53
LINC00858-202ENST00000437892 ERC2O15083 957 aa11.73□□□□□ -0.53
LINC00858-202ENST00000437892 IL15P40933 162 aaPredicted RBP11.73□□□□□ -0.53
LINC00858-202ENST00000437892 RBM25P49756 843 aaKnown RBP11.73□□□□□ -0.53
LINC00858-202ENST00000437892 CTSWP56202 376 aa11.73□□□□□ -0.53
LINC00858-202ENST00000437892 SLC27A3Q5K4L6 730 aa11.73□□□□□ -0.53
LINC00858-202ENST00000437892 DDX60Q8IY21 1712 aaKnown RBP11.73□□□□□ -0.53
LINC00858-202ENST00000437892 FBXO22Q8NEZ5 403 aa11.73□□□□□ -0.53
LINC00858-202ENST00000437892 ECHDC1Q9NTX5 307 aa11.73□□□□□ -0.53
LINC00858-202ENST00000437892 SH3TC1Q8TE82 1336 aa11.72□□□□□ -0.53
LINC00858-202ENST00000437892 PDE8AO60658 829 aa11.72□□□□□ -0.53
LINC00858-202ENST00000437892 IFIT2P09913 472 aaKnown RBP11.72□□□□□ -0.53
LINC00858-202ENST00000437892 FAM89AQ96GI7 184 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms