RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 ARHGEF1Q92888 912 aaKnown RBP16.71■□□□□ 0.27
HLA-DPA1-243ENST00000437811 SRP68Q9UHB9 627 aaKnown RBP16.71■□□□□ 0.27
HLA-DPA1-243ENST00000437811 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
HLA-DPA1-243ENST00000437811 ZPR1O75312 459 aa16.7■□□□□ 0.26
HLA-DPA1-243ENST00000437811 APBA3O96018 575 aa16.69■□□□□ 0.26
HLA-DPA1-243ENST00000437811 TRAPPC3LQ5T215 181 aa16.69■□□□□ 0.26
HLA-DPA1-243ENST00000437811 NUTM1Q86Y26 1132 aa16.69■□□□□ 0.26
HLA-DPA1-243ENST00000437811 PROM2Q8N271 834 aa16.69■□□□□ 0.26
HLA-DPA1-243ENST00000437811 TTLL11Q8NHH1 800 aa16.69■□□□□ 0.26
HLA-DPA1-243ENST00000437811 LRP5O75197 1615 aa16.68■□□□□ 0.26
HLA-DPA1-243ENST00000437811 FAM177BA6PVY3 158 aa16.68■□□□□ 0.26
HLA-DPA1-243ENST00000437811 HSP90B1P14625 803 aaKnown RBP16.68■□□□□ 0.26
HLA-DPA1-243ENST00000437811 CCDC57Q2TAC2 916 aa16.68■□□□□ 0.26
HLA-DPA1-243ENST00000437811 TBC1D9BQ66K14 1250 aa16.68■□□□□ 0.26
HLA-DPA1-243ENST00000437811 EYA2O00167 538 aa16.67■□□□□ 0.26
HLA-DPA1-243ENST00000437811 CIAO1O76071 339 aa16.67■□□□□ 0.26
HLA-DPA1-243ENST00000437811 PHF14O94880 888 aa16.67■□□□□ 0.26
HLA-DPA1-243ENST00000437811 SSFA2P28290 1259 aa16.67■□□□□ 0.26
HLA-DPA1-243ENST00000437811 RFC4P35249 363 aa16.67■□□□□ 0.26
HLA-DPA1-243ENST00000437811 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
HLA-DPA1-243ENST00000437811 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.66■□□□□ 0.26
HLA-DPA1-243ENST00000437811 CDC45O75419 566 aa16.66■□□□□ 0.26
HLA-DPA1-243ENST00000437811 IFIT2P09913 472 aaKnown RBP16.66■□□□□ 0.26
HLA-DPA1-243ENST00000437811 IL15P40933 162 aaPredicted RBP16.66■□□□□ 0.26
HLA-DPA1-243ENST00000437811 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
HLA-DPA1-243ENST00000437811 TSHZ3Q63HK5 1081 aa16.66■□□□□ 0.26
HLA-DPA1-243ENST00000437811 ATG9AQ7Z3C6 839 aa16.66■□□□□ 0.26
HLA-DPA1-243ENST00000437811 AACSQ86V21 672 aa16.66■□□□□ 0.26
HLA-DPA1-243ENST00000437811 EAF2Q96CJ1 260 aaPredicted RBP16.66■□□□□ 0.26
HLA-DPA1-243ENST00000437811 ZNF594Q96JF6 807 aaPredicted RBP16.66■□□□□ 0.26
HLA-DPA1-243ENST00000437811 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.66■□□□□ 0.26
HLA-DPA1-243ENST00000437811 TTC41PQ6P2S7 1318 aa16.66■□□□□ 0.26
HLA-DPA1-243ENST00000437811 HCLS1P14317 486 aaPredicted RBP16.65■□□□□ 0.26
HLA-DPA1-243ENST00000437811 TFCP2Q12800 502 aa16.65■□□□□ 0.26
HLA-DPA1-243ENST00000437811 CCDC85AQ96PX6 553 aaPredicted RBP16.65■□□□□ 0.26
HLA-DPA1-243ENST00000437811 GREM2Q9H772 168 aa16.65■□□□□ 0.26
HLA-DPA1-243ENST00000437811 RTL9Q8NET4 1388 aa16.65■□□□□ 0.26
HLA-DPA1-243ENST00000437811 CASZ1Q86V15 1759 aa16.65■□□□□ 0.26
HLA-DPA1-243ENST00000437811 ANKRD18BA2A2Z9 1011 aa16.64■□□□□ 0.26
HLA-DPA1-243ENST00000437811 SEC24BO95487 1268 aa16.64■□□□□ 0.26
HLA-DPA1-243ENST00000437811 SDSP20132 328 aa16.64■□□□□ 0.26
HLA-DPA1-243ENST00000437811 ITGA6P23229 1130 aa16.64■□□□□ 0.26
HLA-DPA1-243ENST00000437811 TAF7LQ5H9L4 462 aa16.64■□□□□ 0.26
HLA-DPA1-243ENST00000437811 BICDL1Q6ZP65 573 aa16.64■□□□□ 0.26
HLA-DPA1-243ENST00000437811 PI4K2BQ8TCG2 481 aa16.64■□□□□ 0.26
HLA-DPA1-243ENST00000437811 GPATCH3Q96I76 525 aa16.64■□□□□ 0.26
HLA-DPA1-243ENST00000437811 SETDB2Q96T68 719 aa16.64■□□□□ 0.26
HLA-DPA1-243ENST00000437811 NYXQ9GZU5 481 aa16.64■□□□□ 0.26
HLA-DPA1-243ENST00000437811 MYCNP04198 464 aaPredicted RBP16.64■□□□□ 0.25
HLA-DPA1-243ENST00000437811 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
HLA-DPA1-243ENST00000437811 TNNI3KQ59H18 835 aa16.64■□□□□ 0.25
HLA-DPA1-243ENST00000437811 GPR108Q9NPR9 543 aa16.64■□□□□ 0.25
HLA-DPA1-243ENST00000437811 ECHDC1Q9NTX5 307 aa16.64■□□□□ 0.25
HLA-DPA1-243ENST00000437811 FPGT-TNNI3KV9GXZ4 949 aa16.64■□□□□ 0.25
HLA-DPA1-243ENST00000437811 ZNF609O15014 1411 aa16.63■□□□□ 0.25
HLA-DPA1-243ENST00000437811 ABCC12Q96J65 1359 aa16.63■□□□□ 0.25
HLA-DPA1-243ENST00000437811 RIC1Q4ADV7 1423 aa16.63■□□□□ 0.25
HLA-DPA1-243ENST00000437811 ERFEQ4G0M1 354 aa16.63■□□□□ 0.25
HLA-DPA1-243ENST00000437811 SLC10A5Q5PT55 438 aa16.63■□□□□ 0.25
HLA-DPA1-243ENST00000437811 TBC1D9Q6ZT07 1266 aa16.63■□□□□ 0.25
HLA-DPA1-243ENST00000437811 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
HLA-DPA1-243ENST00000437811 PUS3Q9BZE2 481 aaKnown RBP16.63■□□□□ 0.25
HLA-DPA1-243ENST00000437811 CCDC8Q9H0W5 538 aaPredicted RBP16.63■□□□□ 0.25
HLA-DPA1-243ENST00000437811 CARMIL3Q8ND23 1372 aa16.62■□□□□ 0.25
HLA-DPA1-243ENST00000437811 ERC2O15083 957 aa16.62■□□□□ 0.25
HLA-DPA1-243ENST00000437811 GLRX3O76003 335 aaKnown RBP16.62■□□□□ 0.25
HLA-DPA1-243ENST00000437811 ZNF827Q17R98 1081 aa16.62■□□□□ 0.25
HLA-DPA1-243ENST00000437811 CCDC152Q4G0S7 254 aa16.62■□□□□ 0.25
HLA-DPA1-243ENST00000437811 TLR7Q9NYK1 1049 aaKnown RBP16.62■□□□□ 0.25
HLA-DPA1-243ENST00000437811 C1QBPQ07021 282 aaKnown RBP16.61■□□□□ 0.25
HLA-DPA1-243ENST00000437811 NFIXQ14938 502 aa16.61■□□□□ 0.25
HLA-DPA1-243ENST00000437811 NBPF5PQ86XG9 351 aaPredicted RBP16.61■□□□□ 0.25
HLA-DPA1-243ENST00000437811 AK9Q5TCS8 1911 aa16.6■□□□□ 0.25
HLA-DPA1-243ENST00000437811 GYS1P13807 737 aa16.6■□□□□ 0.25
HLA-DPA1-243ENST00000437811 SF3B3Q15393 1217 aaKnown RBP16.6■□□□□ 0.25
HLA-DPA1-243ENST00000437811 UPF2Q9HAU5 1272 aaKnown RBP16.6■□□□□ 0.25
HLA-DPA1-243ENST00000437811 CEP126Q9P2H0 1117 aa16.6■□□□□ 0.25
HLA-DPA1-243ENST00000437811 DBNLQ9UJU6 430 aaKnown RBP16.6■□□□□ 0.25
HLA-DPA1-243ENST00000437811 TRIM6-TRIM34B2RNG4 842 aa16.59■□□□□ 0.25
HLA-DPA1-243ENST00000437811 GTF2E1P29083 439 aaPredicted RBP16.59■□□□□ 0.25
HLA-DPA1-243ENST00000437811 TPTE2Q6XPS3 522 aa16.59■□□□□ 0.25
HLA-DPA1-243ENST00000437811 LDHAL6AQ6ZMR3 332 aa16.59■□□□□ 0.25
HLA-DPA1-243ENST00000437811 RIPOR2Q9Y4F9 1068 aa16.59■□□□□ 0.25
HLA-DPA1-243ENST00000437811 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
HLA-DPA1-243ENST00000437811 SPEF2Q9C093 1822 aa16.58■□□□□ 0.25
HLA-DPA1-243ENST00000437811 EIF5BO60841 1220 aaKnown RBP16.58■□□□□ 0.24
HLA-DPA1-243ENST00000437811 ANP32AP39687 249 aaKnown RBP16.58■□□□□ 0.24
HLA-DPA1-243ENST00000437811 MFAP1P55081 439 aaKnown RBP16.58■□□□□ 0.24
HLA-DPA1-243ENST00000437811 CASC1Q6TDU7 716 aa16.58■□□□□ 0.24
HLA-DPA1-243ENST00000437811 C3orf67Q6ZVT6 689 aa16.58■□□□□ 0.24
HLA-DPA1-243ENST00000437811 DBNDD2Q9BQY9 259 aa16.58■□□□□ 0.24
HLA-DPA1-243ENST00000437811 CNNM1Q9NRU3 951 aa16.58■□□□□ 0.24
HLA-DPA1-243ENST00000437811 TFCP2L1Q9NZI6 479 aa16.58■□□□□ 0.24
HLA-DPA1-243ENST00000437811 CNTROBQ8N137 903 aa16.57■□□□□ 0.24
HLA-DPA1-243ENST00000437811 FLAD1Q8NFF5 587 aa16.57■□□□□ 0.24
HLA-DPA1-243ENST00000437811 RILPL2Q969X0 211 aa16.57■□□□□ 0.24
HLA-DPA1-243ENST00000437811 CAMKK2Q96RR4 588 aa16.57■□□□□ 0.24
HLA-DPA1-243ENST00000437811 SEC31BQ9NQW1 1179 aa16.57■□□□□ 0.24
HLA-DPA1-243ENST00000437811 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
HLA-DPA1-243ENST00000437811 COL4A1P02462 1669 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms