RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 PRIM1P49642 420 aaKnown RBP18.73■□□□□ 0.59
RBFOX1-205ENST00000436368 CASP7P55210 303 aa18.73■□□□□ 0.59
RBFOX1-205ENST00000436368 CCDC83Q8IWF9 413 aa18.73■□□□□ 0.59
RBFOX1-205ENST00000436368 PALLDQ8WX93 1383 aa18.72■□□□□ 0.59
RBFOX1-205ENST00000436368 SH3TC1Q8TE82 1336 aa18.72■□□□□ 0.59
RBFOX1-205ENST00000436368 MSNP26038 577 aaKnown RBP18.72■□□□□ 0.59
RBFOX1-205ENST00000436368 USPL1Q5W0Q7 1092 aa18.72■□□□□ 0.59
RBFOX1-205ENST00000436368 USP48Q86UV5 1035 aa18.72■□□□□ 0.59
RBFOX1-205ENST00000436368 ZSCAN30Q86W11 494 aa18.72■□□□□ 0.59
RBFOX1-205ENST00000436368 RBM27Q9P2N5 1060 aaKnown RBP18.72■□□□□ 0.59
RBFOX1-205ENST00000436368 DBNLQ9UJU6 430 aaKnown RBP18.72■□□□□ 0.59
RBFOX1-205ENST00000436368 UBR2Q8IWV8 1755 aa18.72■□□□□ 0.59
RBFOX1-205ENST00000436368 KCPQ6ZWJ8 1503 aa18.71■□□□□ 0.59
RBFOX1-205ENST00000436368 MCM5P33992 734 aa18.71■□□□□ 0.59
RBFOX1-205ENST00000436368 UVSSAQ2YD98 709 aa18.71■□□□□ 0.59
RBFOX1-205ENST00000436368 LMBR1LQ6UX01 489 aa18.71■□□□□ 0.59
RBFOX1-205ENST00000436368 RBSNQ9H1K0 784 aa18.71■□□□□ 0.59
RBFOX1-205ENST00000436368 KIF3AQ9Y496 699 aa18.71■□□□□ 0.59
RBFOX1-205ENST00000436368 ATP5J2-PTCD1G3V325 749 aa18.7■□□□□ 0.58
RBFOX1-205ENST00000436368 PTCD1O75127 700 aaKnown RBP18.7■□□□□ 0.58
RBFOX1-205ENST00000436368 TAF5LO75529 589 aa18.7■□□□□ 0.58
RBFOX1-205ENST00000436368 MCMDC2Q4G0Z9 681 aa18.7■□□□□ 0.58
RBFOX1-205ENST00000436368 KBTBD3Q8NAB2 608 aa18.7■□□□□ 0.58
RBFOX1-205ENST00000436368 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.7■□□□□ 0.58
RBFOX1-205ENST00000436368 HELLSQ9NRZ9 838 aa18.7■□□□□ 0.58
RBFOX1-205ENST00000436368 CHMP3Q9Y3E7 222 aa18.7■□□□□ 0.58
RBFOX1-205ENST00000436368 ADCK5Q3MIX3 580 aa18.69■□□□□ 0.58
RBFOX1-205ENST00000436368 VSIG10Q8N0Z9 540 aa18.69■□□□□ 0.58
RBFOX1-205ENST00000436368 KLHDC4Q8TBB5 520 aa18.69■□□□□ 0.58
RBFOX1-205ENST00000436368 PDLIM2Q96JY6 352 aa18.69■□□□□ 0.58
RBFOX1-205ENST00000436368 CCDC39Q9UFE4 941 aa18.69■□□□□ 0.58
RBFOX1-205ENST00000436368 EVA1CP58658 441 aa18.69■□□□□ 0.58
RBFOX1-205ENST00000436368 KRT85P78386 507 aa18.69■□□□□ 0.58
RBFOX1-205ENST00000436368 KIF6Q6ZMV9 814 aa18.69■□□□□ 0.58
RBFOX1-205ENST00000436368 DNAJC2Q99543 621 aaKnown RBP18.69■□□□□ 0.58
RBFOX1-205ENST00000436368 SLAIN2Q9P270 581 aa18.69■□□□□ 0.58
RBFOX1-205ENST00000436368 MTMR6Q9Y217 621 aa18.69■□□□□ 0.58
RBFOX1-205ENST00000436368 AKAP2Q9Y2D5 859 aa18.69■□□□□ 0.58
RBFOX1-205ENST00000436368 FOXO4P98177 505 aa18.68■□□□□ 0.58
RBFOX1-205ENST00000436368 TMOD3Q9NYL9 352 aa18.68■□□□□ 0.58
RBFOX1-205ENST00000436368 ABCC12Q96J65 1359 aa18.68■□□□□ 0.58
RBFOX1-205ENST00000436368 NUP188Q5SRE5 1749 aa18.67■□□□□ 0.58
RBFOX1-205ENST00000436368 VPS37CA5D8V6 355 aaPredicted RBP18.67■□□□□ 0.58
RBFOX1-205ENST00000436368 NBPF26B4DH59 902 aa18.67■□□□□ 0.58
RBFOX1-205ENST00000436368 EYA2O00167 538 aa18.67■□□□□ 0.58
RBFOX1-205ENST00000436368 ME3Q16798 604 aa18.67■□□□□ 0.58
RBFOX1-205ENST00000436368 NBPF14Q5TI25 921 aa18.67■□□□□ 0.58
RBFOX1-205ENST00000436368 LARP1BQ659C4 914 aaKnown RBP18.67■□□□□ 0.58
RBFOX1-205ENST00000436368 NBPF10Q6P3W6 841 aaKnown RBP18.67■□□□□ 0.58
RBFOX1-205ENST00000436368 NBPF15Q8N660 670 aa18.67■□□□□ 0.58
RBFOX1-205ENST00000436368 NEK1Q96PY6 1258 aa18.67■□□□□ 0.58
RBFOX1-205ENST00000436368 DBNDD2Q9BQY9 259 aa18.67■□□□□ 0.58
RBFOX1-205ENST00000436368 SPEF2Q9C093 1822 aa18.67■□□□□ 0.58
RBFOX1-205ENST00000436368 ELP1O95163 1332 aa18.66■□□□□ 0.58
RBFOX1-205ENST00000436368 ZNF609O15014 1411 aa18.66■□□□□ 0.58
RBFOX1-205ENST00000436368 TRIM28Q13263 835 aaKnown RBP18.66■□□□□ 0.58
RBFOX1-205ENST00000436368 DSCC1Q9BVC3 393 aa18.66■□□□□ 0.58
RBFOX1-205ENST00000436368 PAG1Q9NWQ8 432 aa18.66■□□□□ 0.58
RBFOX1-205ENST00000436368 TPCN1Q9ULQ1 816 aa18.66■□□□□ 0.58
RBFOX1-205ENST00000436368 CNPY2Q9Y2B0 182 aa18.66■□□□□ 0.58
RBFOX1-205ENST00000436368 CPA1P15085 419 aa18.65■□□□□ 0.58
RBFOX1-205ENST00000436368 HSP90AB3PQ58FF7 597 aa18.65■□□□□ 0.58
RBFOX1-205ENST00000436368 SCAND2PQ9GZW5 306 aaPredicted RBP18.65■□□□□ 0.58
RBFOX1-205ENST00000436368 LARGE1O95461 756 aa18.64■□□□□ 0.58
RBFOX1-205ENST00000436368 STARD3NLO95772 234 aa18.64■□□□□ 0.58
RBFOX1-205ENST00000436368 ZFYP08048 801 aaPredicted RBP18.64■□□□□ 0.58
RBFOX1-205ENST00000436368 LLPHQ9BRT6 129 aaKnown RBP18.64■□□□□ 0.58
RBFOX1-205ENST00000436368 CEP126Q9P2H0 1117 aa18.64■□□□□ 0.58
RBFOX1-205ENST00000436368 ABCA3Q99758 1704 aa18.64■□□□□ 0.58
RBFOX1-205ENST00000436368 FIBPO43427 364 aa18.64■□□□□ 0.57
RBFOX1-205ENST00000436368 PIP4K2AP48426 406 aaPredicted RBP18.64■□□□□ 0.57
RBFOX1-205ENST00000436368 FGD1P98174 961 aa18.64■□□□□ 0.57
RBFOX1-205ENST00000436368 CCDC57Q2TAC2 916 aa18.64■□□□□ 0.57
RBFOX1-205ENST00000436368 ZNF589Q86UQ0 364 aaPredicted RBP18.64■□□□□ 0.57
RBFOX1-205ENST00000436368 NEUROD6Q96NK8 337 aa18.64■□□□□ 0.57
RBFOX1-205ENST00000436368 ISCA1Q9BUE6 129 aa18.64■□□□□ 0.57
RBFOX1-205ENST00000436368 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.64■□□□□ 0.57
RBFOX1-205ENST00000436368 TCIRG1Q13488 830 aa18.63■□□□□ 0.57
RBFOX1-205ENST00000436368 CCDC158Q5M9N0 1113 aa18.63■□□□□ 0.57
RBFOX1-205ENST00000436368 TTLL7Q6ZT98 887 aa18.63■□□□□ 0.57
RBFOX1-205ENST00000436368 PLA2G12BQ9BX93 195 aa18.63■□□□□ 0.57
RBFOX1-205ENST00000436368 NSFL1CQ9UNZ2 370 aaKnown RBP18.63■□□□□ 0.57
RBFOX1-205ENST00000436368 XIRP1Q702N8 1843 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 GADD45BO75293 160 aaPredicted RBP18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 IFIT1P09914 478 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 HSP90B1P14625 803 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 TJP1Q07157 1748 aa18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 FOXD4L6Q3SYB3 417 aaPredicted RBP18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 FOXD4L3Q6VB84 417 aaPredicted RBP18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 ATG9AQ7Z3C6 839 aa18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 DDX54Q8TDD1 881 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 GTF3C6Q969F1 213 aa18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 ZBTB3Q9H5J0 574 aa18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 GDPD2Q9HCC8 539 aa18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 CTNNA3Q9UI47 895 aa18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 NOL7Q9UMY1 257 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-205ENST00000436368 GOLGA6L4A6NEF3 574 aa18.61■□□□□ 0.57
RBFOX1-205ENST00000436368 A1BGP04217 495 aa18.61■□□□□ 0.57
RBFOX1-205ENST00000436368 PCCAP05165 728 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms