RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 IQSEC3Q9UPP2 1182 aaPredicted RBP13.25□□□□□ -0.29
LINC01516-201ENST00000436140 GOLIM4O00461 696 aa13.24□□□□□ -0.29
LINC01516-201ENST00000436140 FRAT2O75474 233 aaPredicted RBP13.24□□□□□ -0.29
LINC01516-201ENST00000436140 REC8O95072 547 aa13.24□□□□□ -0.29
LINC01516-201ENST00000436140 METTL24Q5JXM2 366 aa13.24□□□□□ -0.29
LINC01516-201ENST00000436140 TTLL11Q8NHH1 800 aa13.24□□□□□ -0.29
LINC01516-201ENST00000436140 SIPA1L3O60292 1781 aaPredicted RBP13.24□□□□□ -0.29
LINC01516-201ENST00000436140 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
LINC01516-201ENST00000436140 EYA2O00167 538 aa13.24□□□□□ -0.29
LINC01516-201ENST00000436140 ANTXR1Q9H6X2 564 aa13.24□□□□□ -0.29
LINC01516-201ENST00000436140 TRPC5Q9UL62 973 aaPredicted RBP13.24□□□□□ -0.29
LINC01516-201ENST00000436140 PARP4Q9UKK3 1724 aaKnown RBP13.24□□□□□ -0.29
LINC01516-201ENST00000436140 RBM25P49756 843 aaKnown RBP13.23□□□□□ -0.29
LINC01516-201ENST00000436140 KIAA1211Q6ZU35 1233 aa13.23□□□□□ -0.29
LINC01516-201ENST00000436140 CACNA1FO60840 1977 aa13.23□□□□□ -0.29
LINC01516-201ENST00000436140 PCCAP05165 728 aaPredicted RBP13.23□□□□□ -0.29
LINC01516-201ENST00000436140 PTH1RQ03431 593 aa13.23□□□□□ -0.29
LINC01516-201ENST00000436140 TCEANC2Q96MN5 208 aa13.23□□□□□ -0.29
LINC01516-201ENST00000436140 SPATA31A6Q5VVP1 1343 aa13.23□□□□□ -0.29
LINC01516-201ENST00000436140 ABCC6O95255 1503 aa13.23□□□□□ -0.29
LINC01516-201ENST00000436140 SLC51AQ86UW1 340 aa13.23□□□□□ -0.29
LINC01516-201ENST00000436140 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
LINC01516-201ENST00000436140 TOGARAM1Q9Y4F4 1720 aa13.23□□□□□ -0.29
LINC01516-201ENST00000436140 CAMTA2O94983 1202 aa13.22□□□□□ -0.29
LINC01516-201ENST00000436140 NMIQ13287 307 aaPredicted RBP13.22□□□□□ -0.29
LINC01516-201ENST00000436140 TPRNQ4KMQ1 711 aa13.22□□□□□ -0.29
LINC01516-201ENST00000436140 FAM196AQ6ZSG2 479 aa13.22□□□□□ -0.29
LINC01516-201ENST00000436140 C3orf67Q6ZVT6 689 aa13.22□□□□□ -0.29
LINC01516-201ENST00000436140 UTP14AQ9BVJ6 771 aaKnown RBP13.22□□□□□ -0.29
LINC01516-201ENST00000436140 TBC1D9BQ66K14 1250 aa13.21□□□□□ -0.29
LINC01516-201ENST00000436140 LRRC4BQ9NT99 713 aa13.21□□□□□ -0.29
LINC01516-201ENST00000436140 A0A0D9SFI3 127 aa13.21□□□□□ -0.29
LINC01516-201ENST00000436140 ANKRD18BA2A2Z9 1011 aa13.21□□□□□ -0.29
LINC01516-201ENST00000436140 CTSWP56202 376 aa13.21□□□□□ -0.29
LINC01516-201ENST00000436140 COL9A3Q14050 684 aaPredicted RBP13.21□□□□□ -0.29
LINC01516-201ENST00000436140 FOXD4L6Q3SYB3 417 aaPredicted RBP13.21□□□□□ -0.29
LINC01516-201ENST00000436140 ERFEQ4G0M1 354 aa13.21□□□□□ -0.29
LINC01516-201ENST00000436140 PRPF40BQ6NWY9 871 aaKnown RBP13.21□□□□□ -0.29
LINC01516-201ENST00000436140 FOXD4L3Q6VB84 417 aaPredicted RBP13.21□□□□□ -0.29
LINC01516-201ENST00000436140 ADAMTS7Q9UKP4 1686 aa13.21□□□□□ -0.3
LINC01516-201ENST00000436140 ZPR1O75312 459 aa13.2□□□□□ -0.3
LINC01516-201ENST00000436140 SCARF1Q14162 830 aa13.2□□□□□ -0.3
LINC01516-201ENST00000436140 NFKBIBQ15653 356 aa13.2□□□□□ -0.3
LINC01516-201ENST00000436140 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
LINC01516-201ENST00000436140 SH3TC1Q8TE82 1336 aa13.2□□□□□ -0.3
LINC01516-201ENST00000436140 MPHOSPH8Q99549 860 aa13.2□□□□□ -0.3
LINC01516-201ENST00000436140 IFIT1P09914 478 aaKnown RBP13.2□□□□□ -0.3
LINC01516-201ENST00000436140 IL15P40933 162 aaPredicted RBP13.2□□□□□ -0.3
LINC01516-201ENST00000436140 ZNF589Q86UQ0 364 aaPredicted RBP13.2□□□□□ -0.3
LINC01516-201ENST00000436140 ZNF34Q8IZ26 560 aa13.2□□□□□ -0.3
LINC01516-201ENST00000436140 ARHGEF1Q92888 912 aaKnown RBP13.2□□□□□ -0.3
LINC01516-201ENST00000436140 XAGE2Q96GT9 111 aa13.2□□□□□ -0.3
LINC01516-201ENST00000436140 TAOK2Q9UL54 1235 aa13.19□□□□□ -0.3
LINC01516-201ENST00000436140 SHANK3Q9BYB0 1731 aa13.19□□□□□ -0.3
LINC01516-201ENST00000436140 PDE8AO60658 829 aa13.19□□□□□ -0.3
LINC01516-201ENST00000436140 EVI5LQ96CN4 794 aa13.19□□□□□ -0.3
LINC01516-201ENST00000436140 JAG2Q9Y219 1238 aa13.19□□□□□ -0.3
LINC01516-201ENST00000436140 RTCBQ9Y3I0 505 aaKnown RBP13.19□□□□□ -0.3
LINC01516-201ENST00000436140 TAF6LQ9Y6J9 622 aa13.19□□□□□ -0.3
LINC01516-201ENST00000436140 TTC41PQ6P2S7 1318 aa13.18□□□□□ -0.3
LINC01516-201ENST00000436140 SGSM2O43147 1006 aa13.18□□□□□ -0.3
LINC01516-201ENST00000436140 RFC4P35249 363 aa13.18□□□□□ -0.3
LINC01516-201ENST00000436140 TRIM28Q13263 835 aaKnown RBP13.18□□□□□ -0.3
LINC01516-201ENST00000436140 TTC39AQ5SRH9 613 aa13.18□□□□□ -0.3
LINC01516-201ENST00000436140 KRT27Q7Z3Y8 459 aa13.18□□□□□ -0.3
LINC01516-201ENST00000436140 CHAMP1Q96JM3 812 aa13.18□□□□□ -0.3
LINC01516-201ENST00000436140 AK7Q96M32 723 aa13.18□□□□□ -0.3
LINC01516-201ENST00000436140 ZGPATQ8N5A5 531 aaKnown RBP13.17□□□□□ -0.3
LINC01516-201ENST00000436140 COL15A1P39059 1388 aa13.17□□□□□ -0.3
LINC01516-201ENST00000436140 PLCH1Q4KWH8 1693 aa13.17□□□□□ -0.3
LINC01516-201ENST00000436140 ERVV-1B6SEH8 477 aa13.17□□□□□ -0.3
LINC01516-201ENST00000436140 WASHC4Q2M389 1173 aa13.17□□□□□ -0.3
LINC01516-201ENST00000436140 NBPF5PQ86XG9 351 aaPredicted RBP13.17□□□□□ -0.3
LINC01516-201ENST00000436140 STK11IPQ8N1F8 1099 aa13.17□□□□□ -0.3
LINC01516-201ENST00000436140 PPFIA3O75145 1194 aa13.17□□□□□ -0.3
LINC01516-201ENST00000436140 ATP2B3Q16720 1220 aa13.17□□□□□ -0.3
LINC01516-201ENST00000436140 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
LINC01516-201ENST00000436140 ITGB4P16144 1822 aa13.17□□□□□ -0.3
LINC01516-201ENST00000436140 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.16□□□□□ -0.3
LINC01516-201ENST00000436140 CSF1RP07333 972 aa13.16□□□□□ -0.3
LINC01516-201ENST00000436140 ZAP70P43403 619 aa13.16□□□□□ -0.3
LINC01516-201ENST00000436140 ADCK5Q3MIX3 580 aa13.16□□□□□ -0.3
LINC01516-201ENST00000436140 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
LINC01516-201ENST00000436140 A0A0G2JLW4 131 aa13.16□□□□□ -0.3
LINC01516-201ENST00000436140 MCCP23508 829 aa13.16□□□□□ -0.3
LINC01516-201ENST00000436140 GLI3P10071 1580 aa13.16□□□□□ -0.3
LINC01516-201ENST00000436140 K7ELQ4 463 aaPredicted RBP13.15□□□□□ -0.3
LINC01516-201ENST00000436140 CCDC158Q5M9N0 1113 aa13.15□□□□□ -0.3
LINC01516-201ENST00000436140 TRAPPC3LQ5T215 181 aa13.15□□□□□ -0.3
LINC01516-201ENST00000436140 VPS53Q5VIR6 699 aa13.15□□□□□ -0.3
LINC01516-201ENST00000436140 IDH1O75874 414 aaKnown RBP13.15□□□□□ -0.3
LINC01516-201ENST00000436140 ATP5JP18859 108 aa13.15□□□□□ -0.3
LINC01516-201ENST00000436140 PHKA1P46020 1223 aa13.15□□□□□ -0.3
LINC01516-201ENST00000436140 PAG1Q9NWQ8 432 aa13.15□□□□□ -0.3
LINC01516-201ENST00000436140 RIPOR2Q9Y4F9 1068 aa13.15□□□□□ -0.3
LINC01516-201ENST00000436140 PKP1Q13835 747 aa13.14□□□□□ -0.31
LINC01516-201ENST00000436140 RABEP1Q15276 862 aa13.14□□□□□ -0.31
LINC01516-201ENST00000436140 JAKMIP1Q96N16 626 aaKnown RBP13.14□□□□□ -0.31
LINC01516-201ENST00000436140 LRRC2Q9BYS8 371 aa13.14□□□□□ -0.31
LINC01516-201ENST00000436140 LSG1Q9H089 658 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms