RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 ERC1Q8IUD2 1116 aa14.04□□□□□ -0.16
PCOTH-203ENST00000435039 JARID2Q92833 1246 aaPredicted RBP14.04□□□□□ -0.16
PCOTH-203ENST00000435039 LRRCC1Q9C099 1032 aa14.04□□□□□ -0.16
PCOTH-203ENST00000435039 COPRSQ9NQ92 184 aa14.04□□□□□ -0.16
PCOTH-203ENST00000435039 RTL9Q8NET4 1388 aa14.04□□□□□ -0.16
PCOTH-203ENST00000435039 TNRC6CQ9HCJ0 1690 aaKnown RBP14.04□□□□□ -0.16
PCOTH-203ENST00000435039 PDE8AO60658 829 aa14.03□□□□□ -0.16
PCOTH-203ENST00000435039 SURF6O75683 361 aaKnown RBP14.03□□□□□ -0.16
PCOTH-203ENST00000435039 RFX5P48382 616 aaPredicted RBP14.03□□□□□ -0.16
PCOTH-203ENST00000435039 RTL5Q5HYW3 569 aaPredicted RBP14.03□□□□□ -0.16
PCOTH-203ENST00000435039 SMIM5Q71RC9 77 aa14.03□□□□□ -0.16
PCOTH-203ENST00000435039 COL23A1Q86Y22 540 aaPredicted RBP14.03□□□□□ -0.16
PCOTH-203ENST00000435039 NLGN2Q8NFZ4 835 aa14.03□□□□□ -0.16
PCOTH-203ENST00000435039 KIF1BPQ96EK5 621 aa14.03□□□□□ -0.16
PCOTH-203ENST00000435039 SETDB2Q96T68 719 aa14.03□□□□□ -0.16
PCOTH-203ENST00000435039 LNPKQ9C0E8 428 aa14.03□□□□□ -0.16
PCOTH-203ENST00000435039 ABCC12Q96J65 1359 aa14.02□□□□□ -0.17
PCOTH-203ENST00000435039 CSF1RP07333 972 aa14.02□□□□□ -0.17
PCOTH-203ENST00000435039 GYS1P13807 737 aa14.02□□□□□ -0.17
PCOTH-203ENST00000435039 PDE4AP27815 886 aa14.02□□□□□ -0.17
PCOTH-203ENST00000435039 RGS3P49796 1198 aa14.02□□□□□ -0.17
PCOTH-203ENST00000435039 SKAP1Q86WV1 359 aa14.02□□□□□ -0.17
PCOTH-203ENST00000435039 MSH5O43196 834 aa14.01□□□□□ -0.17
PCOTH-203ENST00000435039 PTPN12Q05209 780 aaKnown RBP14.01□□□□□ -0.17
PCOTH-203ENST00000435039 FAM161AQ3B820 660 aa14.01□□□□□ -0.17
PCOTH-203ENST00000435039 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
PCOTH-203ENST00000435039 CHMP3Q9Y3E7 222 aa14.01□□□□□ -0.17
PCOTH-203ENST00000435039 SPEF2Q9C093 1822 aa14□□□□□ -0.17
PCOTH-203ENST00000435039 OS9Q13438 667 aaPredicted RBP14□□□□□ -0.17
PCOTH-203ENST00000435039 NBPF5PQ86XG9 351 aaPredicted RBP14□□□□□ -0.17
PCOTH-203ENST00000435039 TTLL11Q8NHH1 800 aa14□□□□□ -0.17
PCOTH-203ENST00000435039 RHPN1Q8TCX5 695 aa14□□□□□ -0.17
PCOTH-203ENST00000435039 PA2G4Q9UQ80 394 aaKnown RBP14□□□□□ -0.17
PCOTH-203ENST00000435039 A0A1B0GUL6 1792 aa14□□□□□ -0.17
PCOTH-203ENST00000435039 ARAP2Q8WZ64 1704 aa13.99□□□□□ -0.17
PCOTH-203ENST00000435039 SALL3Q9BXA9 1300 aa13.99□□□□□ -0.17
PCOTH-203ENST00000435039 CIAO1O76071 339 aa13.99□□□□□ -0.17
PCOTH-203ENST00000435039 G3BP1Q13283 466 aaKnown RBP eCLIP13.99□□□□□ -0.17
PCOTH-203ENST00000435039 NFIXQ14938 502 aa13.99□□□□□ -0.17
PCOTH-203ENST00000435039 CCDC57Q2TAC2 916 aa13.99□□□□□ -0.17
PCOTH-203ENST00000435039 CCDC152Q4G0S7 254 aa13.99□□□□□ -0.17
PCOTH-203ENST00000435039 MSL1Q68DK7 614 aa13.99□□□□□ -0.17
PCOTH-203ENST00000435039 BICDL1Q6ZP65 573 aa13.99□□□□□ -0.17
PCOTH-203ENST00000435039 SYNE4Q8N205 404 aa13.99□□□□□ -0.17
PCOTH-203ENST00000435039 FAM177BA6PVY3 158 aa13.98□□□□□ -0.17
PCOTH-203ENST00000435039 APBB1O00213 710 aa13.98□□□□□ -0.17
PCOTH-203ENST00000435039 SMARCA5O60264 1052 aaPredicted RBP13.98□□□□□ -0.17
PCOTH-203ENST00000435039 YBX3P16989 372 aaKnown RBP eCLIP13.98□□□□□ -0.17
PCOTH-203ENST00000435039 C1QTNF8P60827 252 aa13.98□□□□□ -0.17
PCOTH-203ENST00000435039 IFIT5Q13325 482 aaKnown RBP13.98□□□□□ -0.17
PCOTH-203ENST00000435039 ERFEQ4G0M1 354 aa13.98□□□□□ -0.17
PCOTH-203ENST00000435039 SLC10A5Q5PT55 438 aa13.98□□□□□ -0.17
PCOTH-203ENST00000435039 TPTE2Q6XPS3 522 aa13.98□□□□□ -0.17
PCOTH-203ENST00000435039 NUTM1Q86Y26 1132 aa13.98□□□□□ -0.17
PCOTH-203ENST00000435039 GREM2Q9H772 168 aa13.98□□□□□ -0.17
PCOTH-203ENST00000435039 ZNF609O15014 1411 aa13.98□□□□□ -0.17
PCOTH-203ENST00000435039 AOX1Q06278 1338 aa13.97□□□□□ -0.17
PCOTH-203ENST00000435039 ANKRD18BA2A2Z9 1011 aa13.97□□□□□ -0.17
PCOTH-203ENST00000435039 HCLS1P14317 486 aaPredicted RBP13.97□□□□□ -0.17
PCOTH-203ENST00000435039 ITGA6P23229 1130 aa13.97□□□□□ -0.17
PCOTH-203ENST00000435039 IL15P40933 162 aaPredicted RBP13.97□□□□□ -0.17
PCOTH-203ENST00000435039 CNBD1Q8NA66 436 aa13.97□□□□□ -0.17
PCOTH-203ENST00000435039 KLHDC4Q8TBB5 520 aa13.97□□□□□ -0.17
PCOTH-203ENST00000435039 SIL1Q9H173 461 aa13.97□□□□□ -0.17
PCOTH-203ENST00000435039 ANKRD31Q8N7Z5 1873 aa13.96□□□□□ -0.17
PCOTH-203ENST00000435039 EYA2O00167 538 aa13.96□□□□□ -0.17
PCOTH-203ENST00000435039 GTF2E1P29083 439 aaPredicted RBP13.96□□□□□ -0.17
PCOTH-203ENST00000435039 TM4SF1P30408 202 aa13.96□□□□□ -0.17
PCOTH-203ENST00000435039 SF3B3Q15393 1217 aaKnown RBP13.96□□□□□ -0.17
PCOTH-203ENST00000435039 TAF7LQ5H9L4 462 aa13.96□□□□□ -0.17
PCOTH-203ENST00000435039 CLASRPQ8N2M8 674 aaKnown RBP13.96□□□□□ -0.17
PCOTH-203ENST00000435039 NLGN1Q8N2Q7 840 aa13.96□□□□□ -0.17
PCOTH-203ENST00000435039 OSBPL3Q9H4L5 887 aa13.96□□□□□ -0.17
PCOTH-203ENST00000435039 POLRMTO00411 1230 aaKnown RBP13.95□□□□□ -0.18
PCOTH-203ENST00000435039 GRIN3BO60391 1043 aa13.95□□□□□ -0.18
PCOTH-203ENST00000435039 SASH1O94885 1247 aa13.95□□□□□ -0.18
PCOTH-203ENST00000435039 ST5P78524 1137 aa13.95□□□□□ -0.18
PCOTH-203ENST00000435039 DDR1Q08345 913 aa13.95□□□□□ -0.18
PCOTH-203ENST00000435039 BMP2KLQ5H9B9 411 aa13.95□□□□□ -0.18
PCOTH-203ENST00000435039 PLEKHM2Q8IWE5 1019 aa13.95□□□□□ -0.18
PCOTH-203ENST00000435039 IL1RAPL2Q9NP60 686 aa13.95□□□□□ -0.18
PCOTH-203ENST00000435039 NPHP1O15259 732 aa13.94□□□□□ -0.18
PCOTH-203ENST00000435039 COL11A2P13942 1736 aaPredicted RBP13.94□□□□□ -0.18
PCOTH-203ENST00000435039 MX1P20591 662 aa13.94□□□□□ -0.18
PCOTH-203ENST00000435039 PRR5LQ6MZQ0 368 aa13.94□□□□□ -0.18
PCOTH-203ENST00000435039 ATG9AQ7Z3C6 839 aa13.94□□□□□ -0.18
PCOTH-203ENST00000435039 CCDC85AQ96PX6 553 aaPredicted RBP13.94□□□□□ -0.18
PCOTH-203ENST00000435039 CDC5LQ99459 802 aaKnown RBP13.94□□□□□ -0.18
PCOTH-203ENST00000435039 GPR108Q9NPR9 543 aa13.94□□□□□ -0.18
PCOTH-203ENST00000435039 STAP2Q9UGK3 403 aa13.94□□□□□ -0.18
PCOTH-203ENST00000435039 CD2APQ9Y5K6 639 aa13.94□□□□□ -0.18
PCOTH-203ENST00000435039 COL4A1P02462 1669 aa13.94□□□□□ -0.18
PCOTH-203ENST00000435039 LRRC37AA6NMS7 1700 aa13.93□□□□□ -0.18
PCOTH-203ENST00000435039 SERPINB2P05120 415 aa13.93□□□□□ -0.18
PCOTH-203ENST00000435039 PDE1AP54750 535 aa13.93□□□□□ -0.18
PCOTH-203ENST00000435039 TTC22Q5TAA0 569 aa13.93□□□□□ -0.18
PCOTH-203ENST00000435039 OTUD7AQ8TE49 926 aaPredicted RBP13.93□□□□□ -0.18
PCOTH-203ENST00000435039 GPATCH3Q96I76 525 aa13.93□□□□□ -0.18
PCOTH-203ENST00000435039 ZNF594Q96JF6 807 aaPredicted RBP13.93□□□□□ -0.18
PCOTH-203ENST00000435039 NLRP3Q96P20 1036 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms