RNA–Protein interactions for RNA: ENST00000434685.5

NEB-210, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-210ENST00000434685 ZNF34Q8IZ26 560 aa6.33□□□□□ -1.4
NEB-210ENST00000434685 ZNF784Q8NCA9 323 aaPredicted RBP6.33□□□□□ -1.4
NEB-210ENST00000434685 CCDC85AQ96PX6 553 aaPredicted RBP6.33□□□□□ -1.4
NEB-210ENST00000434685 PA2G4Q9UQ80 394 aaKnown RBP6.33□□□□□ -1.4
NEB-210ENST00000434685 EXOC6BQ9Y2D4 811 aa6.33□□□□□ -1.4
NEB-210ENST00000434685 COL4A1P02462 1669 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 H7C1W4 665 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 SRGAP3O43295 1099 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 TGFB2P61812 414 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 CACNB1Q02641 598 aaPredicted RBP6.32□□□□□ -1.4
NEB-210ENST00000434685 GPR162Q16538 588 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 NPM2Q86SE8 214 aaKnown RBP6.32□□□□□ -1.4
NEB-210ENST00000434685 SMC5Q8IY18 1101 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 CCDC24Q8N4L8 307 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 CCDC191Q8NCU4 936 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 RWDD1Q9H446 243 aaPredicted RBP6.32□□□□□ -1.4
NEB-210ENST00000434685 NARFQ9UHQ1 456 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 PDZRN3Q9UPQ7 1066 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 NIP7Q9Y221 180 aaKnown RBP eCLIP6.32□□□□□ -1.4
NEB-210ENST00000434685 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.32□□□□□ -1.4
NEB-210ENST00000434685 RGL2O15211 777 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 SMARCA5O60264 1052 aaPredicted RBP6.32□□□□□ -1.4
NEB-210ENST00000434685 PDE4AP27815 886 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 RFC4P35249 363 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 RGS3P49796 1198 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 FOXO4P98177 505 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 TRIM28Q13263 835 aaKnown RBP6.32□□□□□ -1.4
NEB-210ENST00000434685 C3orf67Q6ZVT6 689 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 OTUD7AQ8TE49 926 aaPredicted RBP6.32□□□□□ -1.4
NEB-210ENST00000434685 SBF1O95248 1867 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 ABCC12Q96J65 1359 aa6.32□□□□□ -1.4
NEB-210ENST00000434685 IBTKQ9P2D0 1353 aaPredicted RBP6.32□□□□□ -1.4
NEB-210ENST00000434685 NTSR2O95665 410 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 HCLS1P14317 486 aaPredicted RBP6.31□□□□□ -1.4
NEB-210ENST00000434685 TM4SF1P30408 202 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 ATP8B2P98198 1209 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 PLCB2Q00722 1185 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 DDR1Q08345 913 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 RPAP2Q8IXW5 612 aaPredicted RBP6.31□□□□□ -1.4
NEB-210ENST00000434685 KLHL34Q8N239 644 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 SSH3Q8TE77 659 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 LNPKQ9C0E8 428 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 CHMP4BQ9H444 224 aaKnown RBP6.31□□□□□ -1.4
NEB-210ENST00000434685 TRMT112Q9UI30 125 aaKnown RBP6.31□□□□□ -1.4
NEB-210ENST00000434685 POLRMTO00411 1230 aaKnown RBP6.31□□□□□ -1.4
NEB-210ENST00000434685 ZPR1O75312 459 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 PCCAP05165 728 aaPredicted RBP6.31□□□□□ -1.4
NEB-210ENST00000434685 MTX1Q13505 466 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 FAM161AQ3B820 660 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 RABL6Q3YEC7 729 aaPredicted RBP6.31□□□□□ -1.4
NEB-210ENST00000434685 LMBR1LQ6UX01 489 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 SLC51AQ86UW1 340 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 ZBTB38Q8NAP3 1195 aaPredicted RBP6.31□□□□□ -1.4
NEB-210ENST00000434685 SIL1Q9H173 461 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 DCTPP1Q9H773 170 aa6.31□□□□□ -1.4
NEB-210ENST00000434685 RFX5P48382 616 aaPredicted RBP6.3□□□□□ -1.4
NEB-210ENST00000434685 NUCB1Q02818 461 aa6.3□□□□□ -1.4
NEB-210ENST00000434685 NFIXQ14938 502 aa6.3□□□□□ -1.4
NEB-210ENST00000434685 HSP90AB3PQ58FF7 597 aa6.3□□□□□ -1.4
NEB-210ENST00000434685 C16orf71Q8IYS4 520 aaPredicted RBP6.3□□□□□ -1.4
NEB-210ENST00000434685 ZNF594Q96JF6 807 aaPredicted RBP6.3□□□□□ -1.4
NEB-210ENST00000434685 PCDH10Q9P2E7 1040 aa6.3□□□□□ -1.4
NEB-210ENST00000434685 CHMP3Q9Y3E7 222 aa6.3□□□□□ -1.4
NEB-210ENST00000434685 CARMIL3Q8ND23 1372 aa6.3□□□□□ -1.4
NEB-210ENST00000434685 TNRC6CQ9HCJ0 1690 aaKnown RBP6.3□□□□□ -1.4
NEB-210ENST00000434685 DDX60Q8IY21 1712 aaKnown RBP6.3□□□□□ -1.4
NEB-210ENST00000434685 IRS4O14654 1257 aaPredicted RBP6.3□□□□□ -1.4
NEB-210ENST00000434685 ERFEQ4G0M1 354 aa6.3□□□□□ -1.4
NEB-210ENST00000434685 ANKRD45Q5TZF3 282 aa6.3□□□□□ -1.4
NEB-210ENST00000434685 TSHZ3Q63HK5 1081 aa6.3□□□□□ -1.4
NEB-210ENST00000434685 CLEC4GQ6UXB4 293 aa6.3□□□□□ -1.4
NEB-210ENST00000434685 GREM2Q9H772 168 aa6.3□□□□□ -1.4
NEB-210ENST00000434685 PARP3Q9Y6F1 533 aa6.3□□□□□ -1.4
NEB-210ENST00000434685 TIAM2Q8IVF5 1701 aa6.29□□□□□ -1.4
NEB-210ENST00000434685 DICER1Q9UPY3 1922 aaKnown RBP6.29□□□□□ -1.4
NEB-210ENST00000434685 FER1L6Q2WGJ9 1857 aa6.29□□□□□ -1.4
NEB-210ENST00000434685 SH3TC1Q8TE82 1336 aa6.29□□□□□ -1.4
NEB-210ENST00000434685 CDHR2Q9BYE9 1310 aa6.29□□□□□ -1.4
NEB-210ENST00000434685 SURF6O75683 361 aaKnown RBP6.29□□□□□ -1.4
NEB-210ENST00000434685 KCNA3P22001 575 aa6.29□□□□□ -1.4
NEB-210ENST00000434685 PTPN12Q05209 780 aaKnown RBP6.29□□□□□ -1.4
NEB-210ENST00000434685 CHD1LQ86WJ1 897 aa6.29□□□□□ -1.4
NEB-210ENST00000434685 UTP14AQ9BVJ6 771 aaKnown RBP6.29□□□□□ -1.4
NEB-210ENST00000434685 IL1RAPL2Q9NP60 686 aa6.29□□□□□ -1.4
NEB-210ENST00000434685 ZNF652Q9Y2D9 606 aa6.29□□□□□ -1.4
NEB-210ENST00000434685 HMMRO75330 724 aa6.28□□□□□ -1.4
NEB-210ENST00000434685 CTSWP56202 376 aa6.28□□□□□ -1.4
NEB-210ENST00000434685 TTLL11Q8NHH1 800 aa6.28□□□□□ -1.4
NEB-210ENST00000434685 GCC1Q96CN9 775 aa6.28□□□□□ -1.4
NEB-210ENST00000434685 PUS3Q9BZE2 481 aaKnown RBP6.28□□□□□ -1.4
NEB-210ENST00000434685 RIC1Q4ADV7 1423 aa6.28□□□□□ -1.4
NEB-210ENST00000434685 DPEP1P16444 411 aa6.28□□□□□ -1.4
NEB-210ENST00000434685 LRRC24Q50LG9 513 aa6.28□□□□□ -1.4
NEB-210ENST00000434685 PARP10Q53GL7 1025 aa6.28□□□□□ -1.4
NEB-210ENST00000434685 NBPF5PQ86XG9 351 aaPredicted RBP6.28□□□□□ -1.4
NEB-210ENST00000434685 SETDB2Q96T68 719 aa6.28□□□□□ -1.4
NEB-210ENST00000434685 PLA2G12BQ9BX93 195 aa6.28□□□□□ -1.4
NEB-210ENST00000434685 SEC31BQ9NQW1 1179 aa6.28□□□□□ -1.4
NEB-210ENST00000434685 LAMB2P55268 1798 aa6.28□□□□□ -1.4
NEB-210ENST00000434685 SASH1O94885 1247 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms