RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 ALDH1B1P30837 517 aa26.99■■□□□ 1.91
TOP3B-205ENST00000434517 SF3B3Q15393 1217 aaKnown RBP26.99■■□□□ 1.91
TOP3B-205ENST00000434517 DDX46Q7L014 1031 aaKnown RBP26.99■■□□□ 1.91
TOP3B-205ENST00000434517 PLIN1O60240 522 aa26.98■■□□□ 1.91
TOP3B-205ENST00000434517 NBPF7P0C2Y1 421 aaPredicted RBP26.98■■□□□ 1.91
TOP3B-205ENST00000434517 MS4A1P11836 297 aa26.98■■□□□ 1.91
TOP3B-205ENST00000434517 HOXA10P31260 410 aaPredicted RBP26.98■■□□□ 1.91
TOP3B-205ENST00000434517 CTSWP56202 376 aa26.98■■□□□ 1.91
TOP3B-205ENST00000434517 CCDC152Q4G0S7 254 aa26.98■■□□□ 1.91
TOP3B-205ENST00000434517 TMEM57Q8N5G2 664 aa26.98■■□□□ 1.91
TOP3B-205ENST00000434517 GOLGB1Q14789 3259 aaKnown RBP26.98■■□□□ 1.91
TOP3B-205ENST00000434517 SLX4Q8IY92 1834 aa26.97■■□□□ 1.91
TOP3B-205ENST00000434517 YBX3P16989 372 aaKnown RBP eCLIP26.97■■□□□ 1.91
TOP3B-205ENST00000434517 PRPF40BQ6NWY9 871 aaKnown RBP26.97■■□□□ 1.91
TOP3B-205ENST00000434517 CCDC85AQ96PX6 553 aaPredicted RBP26.97■■□□□ 1.91
TOP3B-205ENST00000434517 CRAMP1Q96RY5 1269 aa26.97■■□□□ 1.91
TOP3B-205ENST00000434517 PLA2G12BQ9BX93 195 aa26.97■■□□□ 1.91
TOP3B-205ENST00000434517 USP44Q9H0E7 712 aa26.97■■□□□ 1.91
TOP3B-205ENST00000434517 UTYO14607 1347 aa26.96■■□□□ 1.91
TOP3B-205ENST00000434517 TAF1P21675 1872 aa26.96■■□□□ 1.91
TOP3B-205ENST00000434517 ZNF219Q9P2Y4 722 aaPredicted RBP26.95■■□□□ 1.9
TOP3B-205ENST00000434517 RLBP1P12271 317 aa26.94■■□□□ 1.9
TOP3B-205ENST00000434517 HSPA6P17066 643 aa26.94■■□□□ 1.9
TOP3B-205ENST00000434517 ITPRIPQ8IWB1 547 aa26.94■■□□□ 1.9
TOP3B-205ENST00000434517 TTLL11Q8NHH1 800 aa26.94■■□□□ 1.9
TOP3B-205ENST00000434517 SUCLG2Q96I99 432 aa26.94■■□□□ 1.9
TOP3B-205ENST00000434517 UBTFL1P0CB47 393 aaPredicted RBP26.93■■□□□ 1.9
TOP3B-205ENST00000434517 PANK1Q8TE04 598 aa26.93■■□□□ 1.9
TOP3B-205ENST00000434517 CHMP3Q9Y3E7 222 aa26.93■■□□□ 1.9
TOP3B-205ENST00000434517 C21orf2O43822 256 aa26.92■■□□□ 1.9
TOP3B-205ENST00000434517 GRAPQ13588 217 aa26.92■■□□□ 1.9
TOP3B-205ENST00000434517 GRAPLQ8TC17 118 aaPredicted RBP26.92■■□□□ 1.9
TOP3B-205ENST00000434517 PPEF1O14829 653 aaPredicted RBP26.91■■□□□ 1.9
TOP3B-205ENST00000434517 FOXO4P98177 505 aa26.91■■□□□ 1.9
TOP3B-205ENST00000434517 MEIS3Q99687 375 aa26.91■■□□□ 1.9
TOP3B-205ENST00000434517 GNAI3P08754 354 aa26.9■■□□□ 1.9
TOP3B-205ENST00000434517 EPHA10Q5JZY3 1008 aa26.9■■□□□ 1.9
TOP3B-205ENST00000434517 GREM2Q9H772 168 aa26.9■■□□□ 1.9
TOP3B-205ENST00000434517 SEC31BQ9NQW1 1179 aa26.9■■□□□ 1.9
TOP3B-205ENST00000434517 HDAC5Q9UQL6 1122 aa26.9■■□□□ 1.9
TOP3B-205ENST00000434517 CSF1RP07333 972 aa26.89■■□□□ 1.9
TOP3B-205ENST00000434517 FAM161AQ3B820 660 aa26.89■■□□□ 1.9
TOP3B-205ENST00000434517 LMBR1LQ6UX01 489 aa26.89■■□□□ 1.9
TOP3B-205ENST00000434517 RTL9Q8NET4 1388 aa26.88■■□□□ 1.89
TOP3B-205ENST00000434517 BBOX1O75936 387 aa26.88■■□□□ 1.89
TOP3B-205ENST00000434517 RRP1P56182 461 aaKnown RBP26.88■■□□□ 1.89
TOP3B-205ENST00000434517 SOGA3Q5TF21 947 aa26.88■■□□□ 1.89
TOP3B-205ENST00000434517 ARHGAP27Q6ZUM4 889 aa26.88■■□□□ 1.89
TOP3B-205ENST00000434517 CELF1Q92879 486 aaKnown RBP26.88■■□□□ 1.89
TOP3B-205ENST00000434517 KAZALD1Q96I82 304 aa26.88■■□□□ 1.89
TOP3B-205ENST00000434517 TMX4Q9H1E5 349 aaPredicted RBP26.88■■□□□ 1.89
TOP3B-205ENST00000434517 BICC1Q9H694 974 aaKnown RBP26.88■■□□□ 1.89
TOP3B-205ENST00000434517 SPEF2Q9C093 1822 aa26.88■■□□□ 1.89
TOP3B-205ENST00000434517 CDC5LQ99459 802 aaKnown RBP26.87■■□□□ 1.89
TOP3B-205ENST00000434517 GPBP1L1Q9HC44 474 aaPredicted RBP26.87■■□□□ 1.89
TOP3B-205ENST00000434517 ITGA6P23229 1130 aa26.86■■□□□ 1.89
TOP3B-205ENST00000434517 PDE3AQ14432 1141 aa26.86■■□□□ 1.89
TOP3B-205ENST00000434517 ANKRD18AQ8IVF6 992 aa26.86■■□□□ 1.89
TOP3B-205ENST00000434517 LRRFIP2Q9Y608 721 aaKnown RBP26.86■■□□□ 1.89
TOP3B-205ENST00000434517 COL4A1P02462 1669 aa26.85■■□□□ 1.89
TOP3B-205ENST00000434517 ANKRD18BA2A2Z9 1011 aa26.85■■□□□ 1.89
TOP3B-205ENST00000434517 RPS8P62241 208 aaKnown RBP26.85■■□□□ 1.89
TOP3B-205ENST00000434517 IFIT5Q13325 482 aaKnown RBP26.85■■□□□ 1.89
TOP3B-205ENST00000434517 CCDC93Q567U6 631 aa26.85■■□□□ 1.89
TOP3B-205ENST00000434517 TMC4Q7Z404 712 aa26.85■■□□□ 1.89
TOP3B-205ENST00000434517 C7orf43Q8WVR3 580 aa26.85■■□□□ 1.89
TOP3B-205ENST00000434517 COG6Q9Y2V7 657 aa26.85■■□□□ 1.89
TOP3B-205ENST00000434517 MVPQ14764 893 aaKnown RBP26.84■■□□□ 1.89
TOP3B-205ENST00000434517 CCDC57Q2TAC2 916 aa26.84■■□□□ 1.89
TOP3B-205ENST00000434517 C20orf194Q5TEA3 1177 aa26.84■■□□□ 1.89
TOP3B-205ENST00000434517 OLFM4Q6UX06 510 aa26.84■■□□□ 1.89
TOP3B-205ENST00000434517 RABL6Q3YEC7 729 aaPredicted RBP26.83■■□□□ 1.89
TOP3B-205ENST00000434517 ANKRD44Q8N8A2 993 aa26.83■■□□□ 1.89
TOP3B-205ENST00000434517 ATP6V0A2Q9Y487 856 aa26.83■■□□□ 1.89
TOP3B-205ENST00000434517 GNAI2P04899 355 aa26.82■■□□□ 1.88
TOP3B-205ENST00000434517 IGHMBP2P38935 993 aaKnown RBP26.82■■□□□ 1.88
TOP3B-205ENST00000434517 TAF7LQ5H9L4 462 aa26.82■■□□□ 1.88
TOP3B-205ENST00000434517 CC2D2BQ6DHV5 1058 aa26.82■■□□□ 1.88
TOP3B-205ENST00000434517 FER1L6Q2WGJ9 1857 aa26.82■■□□□ 1.88
TOP3B-205ENST00000434517 SP8Q8IXZ3 490 aa26.81■■□□□ 1.88
TOP3B-205ENST00000434517 DDX19BQ9UMR2 479 aa26.81■■□□□ 1.88
TOP3B-205ENST00000434517 LRRC37AA6NMS7 1700 aa26.8■■□□□ 1.88
TOP3B-205ENST00000434517 ZBTB7BO15156 539 aaPredicted RBP26.8■■□□□ 1.88
TOP3B-205ENST00000434517 SLC51AQ86UW1 340 aa26.8■■□□□ 1.88
TOP3B-205ENST00000434517 RTKN2Q8IZC4 609 aa26.8■■□□□ 1.88
TOP3B-205ENST00000434517 MPHOSPH8Q99549 860 aa26.8■■□□□ 1.88
TOP3B-205ENST00000434517 RASSF7Q02833 373 aa26.78■■□□□ 1.88
TOP3B-205ENST00000434517 GRIPAP1Q4V328 841 aa26.78■■□□□ 1.88
TOP3B-205ENST00000434517 TAOK3Q9H2K8 898 aa26.78■■□□□ 1.88
TOP3B-205ENST00000434517 CHMP4BQ9H444 224 aaKnown RBP26.78■■□□□ 1.88
TOP3B-205ENST00000434517 BSDC1Q9NW68 430 aaPredicted RBP26.77■■□□□ 1.88
TOP3B-205ENST00000434517 NFKBIEO00221 500 aa26.76■■□□□ 1.87
TOP3B-205ENST00000434517 ZNF594Q96JF6 807 aaPredicted RBP26.76■■□□□ 1.87
TOP3B-205ENST00000434517 C1orf115Q9H7X2 142 aa26.76■■□□□ 1.87
TOP3B-205ENST00000434517 SUPT16HQ9Y5B9 1047 aaKnown RBP26.76■■□□□ 1.87
TOP3B-205ENST00000434517 CCDC88AQ3V6T2 1871 aa26.75■■□□□ 1.87
TOP3B-205ENST00000434517 FKBP4Q02790 459 aaKnown RBP eCLIP26.75■■□□□ 1.87
TOP3B-205ENST00000434517 DPP8Q6V1X1 898 aaPredicted RBP26.75■■□□□ 1.87
TOP3B-205ENST00000434517 MPNDQ8N594 471 aa26.75■■□□□ 1.87
TOP3B-205ENST00000434517 NSFL1CQ9UNZ2 370 aaKnown RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms