RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 INSM1Q01101 510 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-213ENST00000433709 NUDT16Q96DE0 195 aaKnown RBP9.84□□□□□ -0.83
HDAC9-213ENST00000433709 ZFATQ9P243 1243 aa9.84□□□□□ -0.83
HDAC9-213ENST00000433709 NESP48681 1621 aa9.84□□□□□ -0.83
HDAC9-213ENST00000433709 UBAP1LF5GYI3 381 aa9.83□□□□□ -0.84
HDAC9-213ENST00000433709 FZD6O60353 706 aa9.83□□□□□ -0.84
HDAC9-213ENST00000433709 BCRP11274 1271 aa9.83□□□□□ -0.84
HDAC9-213ENST00000433709 ADH6P28332 368 aa9.83□□□□□ -0.84
HDAC9-213ENST00000433709 ARHGAP4P98171 946 aa9.83□□□□□ -0.84
HDAC9-213ENST00000433709 FCHSD1Q86WN1 690 aa9.83□□□□□ -0.84
HDAC9-213ENST00000433709 GOLGA6L1Q8N7Z2 621 aa9.83□□□□□ -0.84
HDAC9-213ENST00000433709 PNMA5Q96PV4 448 aa9.83□□□□□ -0.84
HDAC9-213ENST00000433709 AVENQ9NQS1 362 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-213ENST00000433709 CCDC87Q9NVE4 849 aa9.83□□□□□ -0.84
HDAC9-213ENST00000433709 GDF2Q9UK05 429 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-213ENST00000433709 POLIQ9UNA4 740 aa9.83□□□□□ -0.84
HDAC9-213ENST00000433709 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-213ENST00000433709 RSF1Q96T23 1441 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-213ENST00000433709 EGFRP00533 1210 aa9.82□□□□□ -0.84
HDAC9-213ENST00000433709 PDGFAP04085 211 aa9.82□□□□□ -0.84
HDAC9-213ENST00000433709 MZF1P28698 734 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-213ENST00000433709 NEUROD1Q13562 356 aa9.82□□□□□ -0.84
HDAC9-213ENST00000433709 SVOPQ8N4V2 548 aa9.82□□□□□ -0.84
HDAC9-213ENST00000433709 KCTD17Q8N5Z5 321 aa9.82□□□□□ -0.84
HDAC9-213ENST00000433709 C11orf16Q9NQ32 467 aa9.82□□□□□ -0.84
HDAC9-213ENST00000433709 WIZO95785 1651 aa9.81□□□□□ -0.84
HDAC9-213ENST00000433709 SIN3BO75182 1162 aa9.81□□□□□ -0.84
HDAC9-213ENST00000433709 SLCO4C1Q6ZQN7 724 aa9.81□□□□□ -0.84
HDAC9-213ENST00000433709 GALNT6Q8NCL4 622 aa9.81□□□□□ -0.84
HDAC9-213ENST00000433709 GGNBP2Q9H3C7 697 aa9.81□□□□□ -0.84
HDAC9-213ENST00000433709 IGFLR1Q9H665 355 aa9.81□□□□□ -0.84
HDAC9-213ENST00000433709 A6NHS1 94 aa9.8□□□□□ -0.84
HDAC9-213ENST00000433709 OIP5O43482 229 aa9.8□□□□□ -0.84
HDAC9-213ENST00000433709 EDARADDQ8WWZ3 215 aa9.8□□□□□ -0.84
HDAC9-213ENST00000433709 BIN2Q9UBW5 565 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-213ENST00000433709 PATL2C9JE40 543 aaKnown RBP9.79□□□□□ -0.84
HDAC9-213ENST00000433709 RARAP10276 462 aa9.79□□□□□ -0.84
HDAC9-213ENST00000433709 EPXP11678 715 aa9.79□□□□□ -0.84
HDAC9-213ENST00000433709 C8orf34Q49A92 452 aa9.79□□□□□ -0.84
HDAC9-213ENST00000433709 EFCC1Q9HA90 598 aa9.79□□□□□ -0.84
HDAC9-213ENST00000433709 FNDC3AQ9Y2H6 1198 aaKnown RBP9.79□□□□□ -0.84
HDAC9-213ENST00000433709 TOP2AP11388 1531 aaKnown RBP9.78□□□□□ -0.84
HDAC9-213ENST00000433709 SHISA8B8ZZ34 492 aa9.78□□□□□ -0.84
HDAC9-213ENST00000433709 PCSK2P16519 638 aa9.78□□□□□ -0.84
HDAC9-213ENST00000433709 MAP3K10Q02779 954 aa9.78□□□□□ -0.84
HDAC9-213ENST00000433709 TBC1D8BQ0IIM8 1120 aa9.78□□□□□ -0.84
HDAC9-213ENST00000433709 NLRP13Q86W25 1043 aa9.78□□□□□ -0.84
HDAC9-213ENST00000433709 MMP20O60882 483 aa9.77□□□□□ -0.85
HDAC9-213ENST00000433709 ARHGEF15O94989 841 aa9.77□□□□□ -0.85
HDAC9-213ENST00000433709 MAP3K6O95382 1288 aa9.77□□□□□ -0.85
HDAC9-213ENST00000433709 TNFRSF25Q93038 417 aa9.77□□□□□ -0.85
HDAC9-213ENST00000433709 MDFIQ99750 246 aa9.77□□□□□ -0.85
HDAC9-213ENST00000433709 BRPF3Q9ULD4 1205 aa9.77□□□□□ -0.85
HDAC9-213ENST00000433709 TTC16Q8NEE8 873 aa9.76□□□□□ -0.85
HDAC9-213ENST00000433709 UBE2OQ9C0C9 1292 aaKnown RBP9.76□□□□□ -0.85
HDAC9-213ENST00000433709 LRRC4BQ9NT99 713 aa9.76□□□□□ -0.85
HDAC9-213ENST00000433709 CFTRP13569 1480 aa9.76□□□□□ -0.85
HDAC9-213ENST00000433709 MRC2Q9UBG0 1479 aa9.76□□□□□ -0.85
HDAC9-213ENST00000433709 THOC2Q8NI27 1593 aaKnown RBP9.75□□□□□ -0.85
HDAC9-213ENST00000433709 CEP164Q9UPV0 1460 aa9.75□□□□□ -0.85
HDAC9-213ENST00000433709 ELOA3CA0A087WX78 387 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-213ENST00000433709 ELOA3DA6NLF2 546 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-213ENST00000433709 ADARB2-AS1A8MUL3 147 aa9.75□□□□□ -0.85
HDAC9-213ENST00000433709 RPLP1P05386 114 aaKnown RBP9.75□□□□□ -0.85
HDAC9-213ENST00000433709 ELOA3BQ3SY89 546 aa9.75□□□□□ -0.85
HDAC9-213ENST00000433709 DHX32Q7L7V1 743 aaKnown RBP9.75□□□□□ -0.85
HDAC9-213ENST00000433709 ZNF438Q7Z4V0 828 aa9.75□□□□□ -0.85
HDAC9-213ENST00000433709 ELOA3Q8NG57 546 aa9.75□□□□□ -0.85
HDAC9-213ENST00000433709 BTBD6Q96KE9 485 aa9.75□□□□□ -0.85
HDAC9-213ENST00000433709 ELP3Q9H9T3 547 aa9.75□□□□□ -0.85
HDAC9-213ENST00000433709 DNAJB12Q9NXW2 375 aaKnown RBP9.75□□□□□ -0.85
HDAC9-213ENST00000433709 TLR7Q9NYK1 1049 aaKnown RBP9.75□□□□□ -0.85
HDAC9-213ENST00000433709 TMEM63CQ9P1W3 806 aa9.75□□□□□ -0.85
HDAC9-213ENST00000433709 ZBTB42B2RXF5 422 aa9.74□□□□□ -0.85
HDAC9-213ENST00000433709 ADH7P40394 386 aa9.74□□□□□ -0.85
HDAC9-213ENST00000433709 USP5P45974 858 aa9.74□□□□□ -0.85
HDAC9-213ENST00000433709 PDE12Q6L8Q7 609 aaKnown RBP9.74□□□□□ -0.85
HDAC9-213ENST00000433709 GJD3Q8N144 294 aa9.74□□□□□ -0.85
HDAC9-213ENST00000433709 NEDD1Q8NHV4 660 aa9.74□□□□□ -0.85
HDAC9-213ENST00000433709 NDUFB5O43674 189 aa9.73□□□□□ -0.85
HDAC9-213ENST00000433709 MLLT1Q03111 559 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-213ENST00000433709 ENAMQ9NRM1 1142 aa9.73□□□□□ -0.85
HDAC9-213ENST00000433709 FANCD2Q9BXW9 1451 aa9.72□□□□□ -0.85
HDAC9-213ENST00000433709 KIF21AQ7Z4S6 1674 aa9.72□□□□□ -0.85
HDAC9-213ENST00000433709 PSAPP07602 524 aa9.72□□□□□ -0.85
HDAC9-213ENST00000433709 ALAS2P22557 587 aa9.72□□□□□ -0.85
HDAC9-213ENST00000433709 AMPD1P23109 780 aa9.72□□□□□ -0.85
HDAC9-213ENST00000433709 TTC39BQ5VTQ0 682 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-213ENST00000433709 XKR5Q6UX68 686 aa9.72□□□□□ -0.85
HDAC9-213ENST00000433709 TRPM4Q8TD43 1214 aa9.72□□□□□ -0.85
HDAC9-213ENST00000433709 ABI2Q9NYB9 513 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-213ENST00000433709 CNTN3Q9P232 1028 aa9.72□□□□□ -0.85
HDAC9-213ENST00000433709 SLC6A14Q9UN76 642 aa9.72□□□□□ -0.85
HDAC9-213ENST00000433709 CYP2E1P05181 493 aaPredicted RBP9.71□□□□□ -0.86
HDAC9-213ENST00000433709 HFE2Q6ZVN8 426 aa9.71□□□□□ -0.86
HDAC9-213ENST00000433709 CHSY3Q70JA7 882 aa9.71□□□□□ -0.86
HDAC9-213ENST00000433709 GZF1Q9H116 711 aaPredicted RBP9.71□□□□□ -0.86
HDAC9-213ENST00000433709 ADAMTS8Q9UP79 889 aa9.71□□□□□ -0.86
HDAC9-213ENST00000433709 STARD13Q9Y3M8 1113 aa9.71□□□□□ -0.86
HDAC9-213ENST00000433709 WDR62O43379 1518 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms