RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 SF3B3Q15393 1217 aaKnown RBP19.03■□□□□ 0.64
CDRT15-202ENST00000431716 CNKSR1Q969H4 720 aa19.03■□□□□ 0.64
CDRT15-202ENST00000431716 MASTLQ96GX5 879 aa19.03■□□□□ 0.64
CDRT15-202ENST00000431716 UBTFL1P0CB47 393 aaPredicted RBP19.02■□□□□ 0.64
CDRT15-202ENST00000431716 STYK1Q6J9G0 422 aa19.02■□□□□ 0.64
CDRT15-202ENST00000431716 RPGRQ92834 1020 aaKnown RBP19.02■□□□□ 0.64
CDRT15-202ENST00000431716 CHMP4BQ9H444 224 aaKnown RBP19.02■□□□□ 0.64
CDRT15-202ENST00000431716 SUPT16HQ9Y5B9 1047 aaKnown RBP19.02■□□□□ 0.64
CDRT15-202ENST00000431716 DDX60Q8IY21 1712 aaKnown RBP19.01■□□□□ 0.63
CDRT15-202ENST00000431716 KIAA1551Q9HCM1 1747 aa19.01■□□□□ 0.63
CDRT15-202ENST00000431716 HOXA10P31260 410 aaPredicted RBP19.01■□□□□ 0.63
CDRT15-202ENST00000431716 MVPQ14764 893 aaKnown RBP19.01■□□□□ 0.63
CDRT15-202ENST00000431716 CCDC152Q4G0S7 254 aa19.01■□□□□ 0.63
CDRT15-202ENST00000431716 C3orf67Q6ZVT6 689 aa19.01■□□□□ 0.63
CDRT15-202ENST00000431716 ZNF219Q9P2Y4 722 aaPredicted RBP19.01■□□□□ 0.63
CDRT15-202ENST00000431716 DDX19BQ9UMR2 479 aa19.01■□□□□ 0.63
CDRT15-202ENST00000431716 ALDH1B1P30837 517 aa19■□□□□ 0.63
CDRT15-202ENST00000431716 CTSWP56202 376 aa19■□□□□ 0.63
CDRT15-202ENST00000431716 C20orf194Q5TEA3 1177 aa19■□□□□ 0.63
CDRT15-202ENST00000431716 RBM17Q96I25 401 aaKnown RBP19■□□□□ 0.63
CDRT15-202ENST00000431716 MEIS3Q99687 375 aa19■□□□□ 0.63
CDRT15-202ENST00000431716 COG6Q9Y2V7 657 aa19■□□□□ 0.63
CDRT15-202ENST00000431716 LAMB2P55268 1798 aa19■□□□□ 0.63
CDRT15-202ENST00000431716 ZBTB7BO15156 539 aaPredicted RBP18.99■□□□□ 0.63
CDRT15-202ENST00000431716 C21orf2O43822 256 aa18.99■□□□□ 0.63
CDRT15-202ENST00000431716 CSF1RP07333 972 aa18.99■□□□□ 0.63
CDRT15-202ENST00000431716 FOXO4P98177 505 aa18.99■□□□□ 0.63
CDRT15-202ENST00000431716 C9orf131Q5VYM1 1079 aa18.99■□□□□ 0.63
CDRT15-202ENST00000431716 TTLL11Q8NHH1 800 aa18.99■□□□□ 0.63
CDRT15-202ENST00000431716 ZNF526Q8TF50 670 aaPredicted RBP18.99■□□□□ 0.63
CDRT15-202ENST00000431716 SUCLG2Q96I99 432 aa18.99■□□□□ 0.63
CDRT15-202ENST00000431716 CRAMP1Q96RY5 1269 aa18.99■□□□□ 0.63
CDRT15-202ENST00000431716 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
CDRT15-202ENST00000431716 MYH3P11055 1940 aa18.98■□□□□ 0.63
CDRT15-202ENST00000431716 DDX46Q7L014 1031 aaKnown RBP18.98■□□□□ 0.63
CDRT15-202ENST00000431716 KAZALD1Q96I82 304 aa18.98■□□□□ 0.63
CDRT15-202ENST00000431716 GNAI2P04899 355 aa18.97■□□□□ 0.63
CDRT15-202ENST00000431716 PRPF40BQ6NWY9 871 aaKnown RBP18.97■□□□□ 0.63
CDRT15-202ENST00000431716 GPBP1L1Q9HC44 474 aaPredicted RBP18.97■□□□□ 0.63
CDRT15-202ENST00000431716 CHD4Q14839 1912 aa18.96■□□□□ 0.63
CDRT15-202ENST00000431716 RTL9Q8NET4 1388 aa18.96■□□□□ 0.63
CDRT15-202ENST00000431716 RABL6Q3YEC7 729 aaPredicted RBP18.96■□□□□ 0.63
CDRT15-202ENST00000431716 EPHA10Q5JZY3 1008 aa18.96■□□□□ 0.63
CDRT15-202ENST00000431716 SOGA3Q5TF21 947 aa18.96■□□□□ 0.63
CDRT15-202ENST00000431716 LMBR1LQ6UX01 489 aa18.96■□□□□ 0.63
CDRT15-202ENST00000431716 BICC1Q9H694 974 aaKnown RBP18.96■□□□□ 0.63
CDRT15-202ENST00000431716 RNF181Q9P0P0 153 aa18.96■□□□□ 0.63
CDRT15-202ENST00000431716 DLEC1Q9Y238 1755 aa18.96■□□□□ 0.63
CDRT15-202ENST00000431716 BBOX1O75936 387 aa18.95■□□□□ 0.62
CDRT15-202ENST00000431716 LRRFIP2Q9Y608 721 aaKnown RBP18.95■□□□□ 0.62
CDRT15-202ENST00000431716 COL11A2P13942 1736 aaPredicted RBP18.94■□□□□ 0.62
CDRT15-202ENST00000431716 RASSF7Q02833 373 aa18.94■□□□□ 0.62
CDRT15-202ENST00000431716 IFIT5Q13325 482 aaKnown RBP18.94■□□□□ 0.62
CDRT15-202ENST00000431716 GRAPQ13588 217 aa18.94■□□□□ 0.62
CDRT15-202ENST00000431716 ANKRD44Q8N8A2 993 aa18.94■□□□□ 0.62
CDRT15-202ENST00000431716 GRAPLQ8TC17 118 aaPredicted RBP18.94■□□□□ 0.62
CDRT15-202ENST00000431716 CCDC85AQ96PX6 553 aaPredicted RBP18.94■□□□□ 0.62
CDRT15-202ENST00000431716 CDC5LQ99459 802 aaKnown RBP18.94■□□□□ 0.62
CDRT15-202ENST00000431716 GREM2Q9H772 168 aa18.94■□□□□ 0.62
CDRT15-202ENST00000431716 ANKRD18BA2A2Z9 1011 aa18.93■□□□□ 0.62
CDRT15-202ENST00000431716 LMNB1P20700 586 aa18.93■□□□□ 0.62
CDRT15-202ENST00000431716 RPS8P62241 208 aaKnown RBP18.93■□□□□ 0.62
CDRT15-202ENST00000431716 CCDC57Q2TAC2 916 aa18.93■□□□□ 0.62
CDRT15-202ENST00000431716 TMC4Q7Z404 712 aa18.93■□□□□ 0.62
CDRT15-202ENST00000431716 ZBTB40Q9NUA8 1239 aa18.93■□□□□ 0.62
CDRT15-202ENST00000431716 CHMP3Q9Y3E7 222 aa18.93■□□□□ 0.62
CDRT15-202ENST00000431716 ITGA6P23229 1130 aa18.92■□□□□ 0.62
CDRT15-202ENST00000431716 FAM161AQ3B820 660 aa18.92■□□□□ 0.62
CDRT15-202ENST00000431716 SEC31BQ9NQW1 1179 aa18.92■□□□□ 0.62
CDRT15-202ENST00000431716 BRCA1P38398 1863 aaKnown RBP18.92■□□□□ 0.62
CDRT15-202ENST00000431716 ANKRD18AQ8IVF6 992 aa18.91■□□□□ 0.62
CDRT15-202ENST00000431716 TMX4Q9H1E5 349 aaPredicted RBP18.91■□□□□ 0.62
CDRT15-202ENST00000431716 NFKBIEO00221 500 aa18.9■□□□□ 0.62
CDRT15-202ENST00000431716 MTX1Q13505 466 aa18.9■□□□□ 0.62
CDRT15-202ENST00000431716 AAMPQ13685 434 aa18.9■□□□□ 0.62
CDRT15-202ENST00000431716 CCDC93Q567U6 631 aa18.9■□□□□ 0.62
CDRT15-202ENST00000431716 CC2D2BQ6DHV5 1058 aa18.9■□□□□ 0.62
CDRT15-202ENST00000431716 CELF1Q92879 486 aaKnown RBP18.9■□□□□ 0.62
CDRT15-202ENST00000431716 TAOK3Q9H2K8 898 aa18.9■□□□□ 0.62
CDRT15-202ENST00000431716 SLX4Q8IY92 1834 aa18.89■□□□□ 0.61
CDRT15-202ENST00000431716 PPEF1O14829 653 aaPredicted RBP18.89■□□□□ 0.61
CDRT15-202ENST00000431716 IGHMBP2P38935 993 aaKnown RBP18.89■□□□□ 0.61
CDRT15-202ENST00000431716 RTKN2Q8IZC4 609 aa18.89■□□□□ 0.61
CDRT15-202ENST00000431716 C7orf43Q8WVR3 580 aa18.89■□□□□ 0.61
CDRT15-202ENST00000431716 CRBNQ96SW2 442 aa18.89■□□□□ 0.61
CDRT15-202ENST00000431716 ATP8B2P98198 1209 aa18.88■□□□□ 0.61
CDRT15-202ENST00000431716 GRIPAP1Q4V328 841 aa18.88■□□□□ 0.61
CDRT15-202ENST00000431716 TAF7LQ5H9L4 462 aa18.88■□□□□ 0.61
CDRT15-202ENST00000431716 SP8Q8IXZ3 490 aa18.88■□□□□ 0.61
CDRT15-202ENST00000431716 MPHOSPH8Q99549 860 aa18.88■□□□□ 0.61
CDRT15-202ENST00000431716 C1orf115Q9H7X2 142 aa18.88■□□□□ 0.61
CDRT15-202ENST00000431716 BSDC1Q9NW68 430 aaPredicted RBP18.88■□□□□ 0.61
CDRT15-202ENST00000431716 ATP6V0A2Q9Y487 856 aa18.88■□□□□ 0.61
CDRT15-202ENST00000431716 TAF1P21675 1872 aa18.88■□□□□ 0.61
CDRT15-202ENST00000431716 SRGAP3O43295 1099 aa18.87■□□□□ 0.61
CDRT15-202ENST00000431716 ARFGEF1Q9Y6D6 1849 aa18.87■□□□□ 0.61
CDRT15-202ENST00000431716 KDM2BQ8NHM5 1336 aa18.86■□□□□ 0.61
CDRT15-202ENST00000431716 RPAP2Q8IXW5 612 aaPredicted RBP18.86■□□□□ 0.61
CDRT15-202ENST00000431716 LTBP3Q9NS15 1303 aa18.85■□□□□ 0.61
CDRT15-202ENST00000431716 PRELPP51888 382 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms