RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 TRIM50Q86XT4 487 aa4.66□□□□□ -1.66
CDC40-204ENST00000431461 ZDHHC13Q8IUH4 622 aa4.66□□□□□ -1.66
CDC40-204ENST00000431461 SUSD3Q96L08 255 aa4.66□□□□□ -1.66
CDC40-204ENST00000431461 PNMA5Q96PV4 448 aa4.66□□□□□ -1.66
CDC40-204ENST00000431461 LPIN3Q9BQK8 851 aa4.66□□□□□ -1.66
CDC40-204ENST00000431461 COG6Q9Y2V7 657 aa4.66□□□□□ -1.66
CDC40-204ENST00000431461 DEAF1O75398 565 aaPredicted RBP4.65□□□□□ -1.67
CDC40-204ENST00000431461 NFKB1P19838 968 aa4.65□□□□□ -1.67
CDC40-204ENST00000431461 ATP1A2P50993 1020 aa4.65□□□□□ -1.67
CDC40-204ENST00000431461 CCINQ13939 588 aa4.65□□□□□ -1.67
CDC40-204ENST00000431461 UVSSAQ2YD98 709 aa4.65□□□□□ -1.67
CDC40-204ENST00000431461 IER5Q5VY09 327 aa4.65□□□□□ -1.67
CDC40-204ENST00000431461 CCDC102BQ68D86 513 aa4.65□□□□□ -1.67
CDC40-204ENST00000431461 KRT25Q7Z3Z0 450 aa4.65□□□□□ -1.67
CDC40-204ENST00000431461 ASIC4Q96FT7 647 aa4.65□□□□□ -1.67
CDC40-204ENST00000431461 NGLY1Q96IV0 654 aa4.65□□□□□ -1.67
CDC40-204ENST00000431461 TSPAN10Q9H1Z9 355 aaPredicted RBP4.65□□□□□ -1.67
CDC40-204ENST00000431461 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
CDC40-204ENST00000431461 USP17L5A8MUK1 530 aa4.64□□□□□ -1.67
CDC40-204ENST00000431461 DHX15O43143 795 aaKnown RBP4.64□□□□□ -1.67
CDC40-204ENST00000431461 NFIAQ12857 509 aa4.64□□□□□ -1.67
CDC40-204ENST00000431461 ELMSAN1Q6PJG2 1045 aa4.64□□□□□ -1.67
CDC40-204ENST00000431461 SPOCD1Q6ZMY3 1216 aa4.64□□□□□ -1.67
CDC40-204ENST00000431461 BTLAQ7Z6A9 289 aa4.64□□□□□ -1.67
CDC40-204ENST00000431461 PLEKHM2Q8IWE5 1019 aa4.64□□□□□ -1.67
CDC40-204ENST00000431461 CACTIN-AS1Q8N1I8 211 aa4.64□□□□□ -1.67
CDC40-204ENST00000431461 LARGE2Q8N3Y3 721 aa4.64□□□□□ -1.67
CDC40-204ENST00000431461 TPCN2Q8NHX9 752 aa4.64□□□□□ -1.67
CDC40-204ENST00000431461 TRPM4Q8TD43 1214 aa4.64□□□□□ -1.67
CDC40-204ENST00000431461 KIAA1024Q9UPX6 916 aa4.64□□□□□ -1.67
CDC40-204ENST00000431461 ADAMTS4O75173 837 aa4.63□□□□□ -1.67
CDC40-204ENST00000431461 ARID4AP29374 1257 aaPredicted RBP4.63□□□□□ -1.67
CDC40-204ENST00000431461 CLDN10P78369 228 aa4.63□□□□□ -1.67
CDC40-204ENST00000431461 WWC1Q8IX03 1113 aa4.63□□□□□ -1.67
CDC40-204ENST00000431461 AGGF1Q8N302 714 aaeCLIP4.63□□□□□ -1.67
CDC40-204ENST00000431461 STAG2Q8N3U4 1231 aa4.63□□□□□ -1.67
CDC40-204ENST00000431461 DBNDD2Q9BQY9 259 aa4.63□□□□□ -1.67
CDC40-204ENST00000431461 CEP41Q9BYV8 373 aa4.63□□□□□ -1.67
CDC40-204ENST00000431461 PALM3A6NDB9 673 aaPredicted RBP4.62□□□□□ -1.67
CDC40-204ENST00000431461 EPB42P16452 691 aa4.62□□□□□ -1.67
CDC40-204ENST00000431461 PERM1Q5SV97 790 aa4.62□□□□□ -1.67
CDC40-204ENST00000431461 RNF43Q68DV7 783 aa4.62□□□□□ -1.67
CDC40-204ENST00000431461 HFE2Q6ZVN8 426 aa4.62□□□□□ -1.67
CDC40-204ENST00000431461 ALDH16A1Q8IZ83 802 aa4.62□□□□□ -1.67
CDC40-204ENST00000431461 GAS2L2Q8NHY3 880 aa4.62□□□□□ -1.67
CDC40-204ENST00000431461 PRR19A6NJB7 356 aa4.61□□□□□ -1.67
CDC40-204ENST00000431461 C21orf2O43822 256 aa4.61□□□□□ -1.67
CDC40-204ENST00000431461 PPP1R12BO60237 982 aaPredicted RBP4.61□□□□□ -1.67
CDC40-204ENST00000431461 DKK1O94907 266 aa4.61□□□□□ -1.67
CDC40-204ENST00000431461 JUNBP17275 347 aaPredicted RBP4.61□□□□□ -1.67
CDC40-204ENST00000431461 GPLD1P80108 840 aa4.61□□□□□ -1.67
CDC40-204ENST00000431461 SIX5Q8N196 739 aa4.61□□□□□ -1.67
CDC40-204ENST00000431461 OGFOD1Q8N543 542 aa4.61□□□□□ -1.67
CDC40-204ENST00000431461 CHMP7Q8WUX9 453 aaPredicted RBP4.61□□□□□ -1.67
CDC40-204ENST00000431461 C2orf49Q9BVC5 232 aaPredicted RBP4.61□□□□□ -1.67
CDC40-204ENST00000431461 MUC3BQ9H195 1237 aa4.61□□□□□ -1.67
CDC40-204ENST00000431461 ATAD2Q6PL18 1390 aa4.61□□□□□ -1.67
CDC40-204ENST00000431461 USP17L3A6NCW0 530 aa4.6□□□□□ -1.67
CDC40-204ENST00000431461 USP17L4A6NCW7 530 aa4.6□□□□□ -1.67
CDC40-204ENST00000431461 LGR5O75473 907 aa4.6□□□□□ -1.67
CDC40-204ENST00000431461 GLB1P16278 677 aa4.6□□□□□ -1.67
CDC40-204ENST00000431461 USP17L2Q6R6M4 530 aa4.6□□□□□ -1.67
CDC40-204ENST00000431461 USP17L1Q7RTZ2 530 aa4.6□□□□□ -1.67
CDC40-204ENST00000431461 MKRN1Q9UHC7 482 aaKnown RBP4.6□□□□□ -1.67
CDC40-204ENST00000431461 ZBTB42B2RXF5 422 aa4.59□□□□□ -1.67
CDC40-204ENST00000431461 ATP9BO43861 1147 aa4.59□□□□□ -1.67
CDC40-204ENST00000431461 EIF2AK2P19525 551 aaKnown RBP4.59□□□□□ -1.67
CDC40-204ENST00000431461 NRLP54845 237 aa4.59□□□□□ -1.67
CDC40-204ENST00000431461 GDF6Q6KF10 455 aaPredicted RBP4.59□□□□□ -1.67
CDC40-204ENST00000431461 DHX32Q7L7V1 743 aaKnown RBP4.59□□□□□ -1.67
CDC40-204ENST00000431461 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.59□□□□□ -1.67
CDC40-204ENST00000431461 TSEN2Q8NCE0 465 aaKnown RBP4.59□□□□□ -1.67
CDC40-204ENST00000431461 ADAMTS19Q8TE59 1207 aa4.59□□□□□ -1.67
CDC40-204ENST00000431461 UBL7Q96S82 380 aaPredicted RBP4.59□□□□□ -1.67
CDC40-204ENST00000431461 SMG9Q9H0W8 520 aaKnown RBP4.59□□□□□ -1.67
CDC40-204ENST00000431461 DMGDHQ9UI17 866 aaKnown RBP4.59□□□□□ -1.67
CDC40-204ENST00000431461 NCANO14594 1321 aa4.58□□□□□ -1.68
CDC40-204ENST00000431461 DBX1A6NMT0 343 aa4.58□□□□□ -1.68
CDC40-204ENST00000431461 TGFBR3LH3BV60 316 aa4.58□□□□□ -1.68
CDC40-204ENST00000431461 TARSP26639 723 aaKnown RBP4.58□□□□□ -1.68
CDC40-204ENST00000431461 CBLL1Q75N03 491 aa4.58□□□□□ -1.68
CDC40-204ENST00000431461 CLEC10AQ8IUN9 316 aa4.58□□□□□ -1.68
CDC40-204ENST00000431461 ARMC10Q8N2F6 343 aa4.58□□□□□ -1.68
CDC40-204ENST00000431461 UCN2Q96RP3 112 aa4.58□□□□□ -1.68
CDC40-204ENST00000431461 ZFATQ9P243 1243 aa4.58□□□□□ -1.68
CDC40-204ENST00000431461 RAD21O60216 631 aa4.57□□□□□ -1.68
CDC40-204ENST00000431461 SASH3O75995 380 aa4.57□□□□□ -1.68
CDC40-204ENST00000431461 RARAP10276 462 aa4.57□□□□□ -1.68
CDC40-204ENST00000431461 PRKCSHP14314 528 aaPredicted RBP4.57□□□□□ -1.68
CDC40-204ENST00000431461 ITGB5P18084 799 aa4.57□□□□□ -1.68
CDC40-204ENST00000431461 RASA1P20936 1047 aa4.57□□□□□ -1.68
CDC40-204ENST00000431461 SETDB1Q15047 1291 aa4.57□□□□□ -1.68
CDC40-204ENST00000431461 CPSF6Q16630 551 aaKnown RBP eCLIP4.57□□□□□ -1.68
CDC40-204ENST00000431461 RTN1Q16799 776 aa4.57□□□□□ -1.68
CDC40-204ENST00000431461 HDGFL1Q5TGJ6 251 aa4.57□□□□□ -1.68
CDC40-204ENST00000431461 SCG3Q8WXD2 468 aaKnown RBP4.57□□□□□ -1.68
CDC40-204ENST00000431461 POM121Q96HA1 1249 aa4.57□□□□□ -1.68
CDC40-204ENST00000431461 FAM46AQ96IP4 442 aaKnown RBP4.57□□□□□ -1.68
CDC40-204ENST00000431461 ZNF594Q96JF6 807 aaPredicted RBP4.57□□□□□ -1.68
CDC40-204ENST00000431461 FBXL18Q96ME1 805 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms