RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 TRIM28Q13263 835 aaKnown RBP15.18■□□□□ 0.02
TRERNA1-201ENST00000431460 CWF19L2Q2TBE0 894 aaKnown RBP15.18■□□□□ 0.02
TRERNA1-201ENST00000431460 ZBTB38Q8NAP3 1195 aaPredicted RBP15.18■□□□□ 0.02
TRERNA1-201ENST00000431460 CCDC191Q8NCU4 936 aa15.18■□□□□ 0.02
TRERNA1-201ENST00000431460 PSMD1Q99460 953 aa15.18■□□□□ 0.02
TRERNA1-201ENST00000431460 ATP6V0A2Q9Y487 856 aa15.18■□□□□ 0.02
TRERNA1-201ENST00000431460 TAF1P21675 1872 aa15.18■□□□□ 0.02
TRERNA1-201ENST00000431460 COL4A1P02462 1669 aa15.17■□□□□ 0.02
TRERNA1-201ENST00000431460 COL4A5P29400 1685 aa15.17■□□□□ 0.02
TRERNA1-201ENST00000431460 IGKV5-2P06315 115 aa15.17■□□□□ 0.02
TRERNA1-201ENST00000431460 VEGFAP15692 232 aaPredicted RBP15.17■□□□□ 0.02
TRERNA1-201ENST00000431460 LARGE2Q8N3Y3 721 aa15.17■□□□□ 0.02
TRERNA1-201ENST00000431460 JDP2Q8WYK2 163 aa15.17■□□□□ 0.02
TRERNA1-201ENST00000431460 CELF1Q92879 486 aaKnown RBP15.17■□□□□ 0.02
TRERNA1-201ENST00000431460 PPIP5K2O43314 1243 aa15.16■□□□□ 0.02
TRERNA1-201ENST00000431460 BBOX1O75936 387 aa15.16■□□□□ 0.02
TRERNA1-201ENST00000431460 PCCAP05165 728 aaPredicted RBP15.16■□□□□ 0.02
TRERNA1-201ENST00000431460 HSPA6P17066 643 aa15.16■□□□□ 0.02
TRERNA1-201ENST00000431460 AOC3Q16853 763 aa15.16■□□□□ 0.02
TRERNA1-201ENST00000431460 ALDH1L2Q3SY69 923 aa15.16■□□□□ 0.02
TRERNA1-201ENST00000431460 DPP8Q6V1X1 898 aaPredicted RBP15.16■□□□□ 0.02
TRERNA1-201ENST00000431460 RBM46Q8TBY0 533 aaKnown RBP15.16■□□□□ 0.02
TRERNA1-201ENST00000431460 WDR90Q96KV7 1748 aa15.16■□□□□ 0.02
TRERNA1-201ENST00000431460 SF3B3Q15393 1217 aaKnown RBP15.15■□□□□ 0.02
TRERNA1-201ENST00000431460 SP8Q8IXZ3 490 aa15.15■□□□□ 0.02
TRERNA1-201ENST00000431460 MPNDQ8N594 471 aa15.15■□□□□ 0.02
TRERNA1-201ENST00000431460 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
TRERNA1-201ENST00000431460 SEC31BQ9NQW1 1179 aa15.15■□□□□ 0.02
TRERNA1-201ENST00000431460 GJA3Q9Y6H8 435 aa15.15■□□□□ 0.02
TRERNA1-201ENST00000431460 NEURL1BA8MQ27 555 aa15.14■□□□□ 0.01
TRERNA1-201ENST00000431460 POTECB2RU33 542 aa15.14■□□□□ 0.01
TRERNA1-201ENST00000431460 F6X3S4 739 aa15.14■□□□□ 0.01
TRERNA1-201ENST00000431460 GRIPAP1Q4V328 841 aa15.14■□□□□ 0.01
TRERNA1-201ENST00000431460 NIM1KQ8IY84 436 aa15.14■□□□□ 0.01
TRERNA1-201ENST00000431460 SSH1Q8WYL5 1049 aa15.14■□□□□ 0.01
TRERNA1-201ENST00000431460 PDE8AO60658 829 aa15.13■□□□□ 0.01
TRERNA1-201ENST00000431460 HSP90B1P14625 803 aaKnown RBP15.13■□□□□ 0.01
TRERNA1-201ENST00000431460 BRPF1P55201 1214 aaPredicted RBP15.13■□□□□ 0.01
TRERNA1-201ENST00000431460 EIF6P56537 245 aaKnown RBP15.13■□□□□ 0.01
TRERNA1-201ENST00000431460 CCDC152Q4G0S7 254 aa15.13■□□□□ 0.01
TRERNA1-201ENST00000431460 UBE3BQ7Z3V4 1068 aa15.13■□□□□ 0.01
TRERNA1-201ENST00000431460 MRPL50Q8N5N7 158 aaKnown RBP15.13■□□□□ 0.01
TRERNA1-201ENST00000431460 SMC1BQ8NDV3 1235 aa15.13■□□□□ 0.01
TRERNA1-201ENST00000431460 DNAAF4Q8WXU2 420 aa15.13■□□□□ 0.01
TRERNA1-201ENST00000431460 FZD9O00144 591 aa15.12■□□□□ 0.01
TRERNA1-201ENST00000431460 POTEIP0CG38 1075 aa15.12■□□□□ 0.01
TRERNA1-201ENST00000431460 POTEJP0CG39 1038 aa15.12■□□□□ 0.01
TRERNA1-201ENST00000431460 RARSP54136 660 aaKnown RBP15.12■□□□□ 0.01
TRERNA1-201ENST00000431460 CTSWP56202 376 aa15.12■□□□□ 0.01
TRERNA1-201ENST00000431460 SUPT20HQ8NEM7 779 aa15.12■□□□□ 0.01
TRERNA1-201ENST00000431460 NSFL1CQ9UNZ2 370 aaKnown RBP15.12■□□□□ 0.01
TRERNA1-201ENST00000431460 LRRC37AA6NMS7 1700 aa15.12■□□□□ 0.01
TRERNA1-201ENST00000431460 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
TRERNA1-201ENST00000431460 GPSM2P81274 684 aa15.11■□□□□ 0.01
TRERNA1-201ENST00000431460 FSTL1Q12841 308 aa15.11■□□□□ 0.01
TRERNA1-201ENST00000431460 EAPPQ56P03 285 aaPredicted RBP15.11■□□□□ 0.01
TRERNA1-201ENST00000431460 TMC4Q7Z404 712 aa15.11■□□□□ 0.01
TRERNA1-201ENST00000431460 GPR101Q96P66 508 aaPredicted RBP15.11■□□□□ 0.01
TRERNA1-201ENST00000431460 SMC4Q9NTJ3 1288 aa15.11■□□□□ 0.01
TRERNA1-201ENST00000431460 CDHR2Q9BYE9 1310 aa15.11■□□□□ 0.01
TRERNA1-201ENST00000431460 IQCA1LA6NCM1 817 aa15.1■□□□□ 0.01
TRERNA1-201ENST00000431460 C6orf229H3BNL8 230 aa15.1■□□□□ 0.01
TRERNA1-201ENST00000431460 RIMBP2O15034 1052 aa15.1■□□□□ 0.01
TRERNA1-201ENST00000431460 RPS8P62241 208 aaKnown RBP15.1■□□□□ 0.01
TRERNA1-201ENST00000431460 HTRA3P83110 453 aa15.1■□□□□ 0.01
TRERNA1-201ENST00000431460 GCKRQ14397 625 aa15.1■□□□□ 0.01
TRERNA1-201ENST00000431460 RTFDC1Q9BY42 306 aaPredicted RBP15.1■□□□□ 0.01
TRERNA1-201ENST00000431460 APLP1P51693 650 aa15.09■□□□□ 0.01
TRERNA1-201ENST00000431460 SLC4A10Q6U841 1118 aa15.09■□□□□ 0.01
TRERNA1-201ENST00000431460 GPC2Q8N158 579 aa15.09■□□□□ 0.01
TRERNA1-201ENST00000431460 LINS1Q8NG48 757 aa15.09■□□□□ 0.01
TRERNA1-201ENST00000431460 L3MBTL3Q96JM7 780 aaPredicted RBP15.09■□□□□ 0.01
TRERNA1-201ENST00000431460 BCL2L13Q9BXK5 485 aa15.09■□□□□ 0.01
TRERNA1-201ENST00000431460 TAF1DQ9H5J8 278 aaPredicted RBP15.09■□□□□ 0.01
TRERNA1-201ENST00000431460 GREM2Q9H772 168 aa15.09■□□□□ 0.01
TRERNA1-201ENST00000431460 HACL1Q9UJ83 578 aa15.09■□□□□ 0.01
TRERNA1-201ENST00000431460 PTPRCP08575 1304 aa15.09■□□□□ 0.01
TRERNA1-201ENST00000431460 CEP350Q5VT06 3117 aa15.08■□□□□ 0.01
TRERNA1-201ENST00000431460 EPHX2P34913 555 aa15.08■□□□□ 0
TRERNA1-201ENST00000431460 KIAA2012Q0VF49 1180 aa15.08■□□□□ 0
TRERNA1-201ENST00000431460 ANKRD18AQ8IVF6 992 aa15.08■□□□□ 0
TRERNA1-201ENST00000431460 ANKIB1Q9P2G1 1089 aa15.08■□□□□ 0
TRERNA1-201ENST00000431460 H7C1W4 665 aa15.07■□□□□ 0
TRERNA1-201ENST00000431460 RAD17O75943 681 aa15.07■□□□□ 0
TRERNA1-201ENST00000431460 UFL1O94874 794 aa15.07■□□□□ 0
TRERNA1-201ENST00000431460 LMOD1P29536 600 aaPredicted RBP15.07■□□□□ 0
TRERNA1-201ENST00000431460 WASHC4Q2M389 1173 aa15.07■□□□□ 0
TRERNA1-201ENST00000431460 TTLL11Q8NHH1 800 aa15.07■□□□□ 0
TRERNA1-201ENST00000431460 DBNDD1Q9H9R9 158 aa15.07■□□□□ 0
TRERNA1-201ENST00000431460 POLLQ9UGP5 575 aa15.07■□□□□ 0
TRERNA1-201ENST00000431460 ZNRF3Q9ULT6 936 aa15.07■□□□□ 0
TRERNA1-201ENST00000431460 CLEC11AQ9Y240 323 aa15.07■□□□□ 0
TRERNA1-201ENST00000431460 SPEF2Q9C093 1822 aa15.07■□□□□ 0
TRERNA1-201ENST00000431460 DOK7Q18PE1 504 aa15.06■□□□□ 0
TRERNA1-201ENST00000431460 FAM161AQ3B820 660 aa15.06■□□□□ 0
TRERNA1-201ENST00000431460 BEND3Q5T5X7 828 aa15.06■□□□□ 0
TRERNA1-201ENST00000431460 CDC5LQ99459 802 aaKnown RBP15.06■□□□□ 0
TRERNA1-201ENST00000431460 CHMP3Q9Y3E7 222 aa15.06■□□□□ 0
TRERNA1-201ENST00000431460 KIF16BQ96L93 1317 aa15.06■□□□□ 0
TRERNA1-201ENST00000431460 SCN4AP35499 1836 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms