RNA–Protein interactions for RNA: ENST00000431311.1

LINC01343-201, Transcript of long intergenic non-protein coding RNA 1343, humanhuman

TSL 3 BASIC

Gene LINC01343, Length 2,283 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01343-201ENST00000431311 LRRC37A3O60309 1634 aa12.59□□□□□ -0.39
LINC01343-201ENST00000431311 FAM177BA6PVY3 158 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 AP5Z1O43299 807 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 FIBPO43427 364 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 KIF20AO95235 890 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 TSPYL4Q9UJ04 414 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 PYCARDQ9ULZ3 195 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 SNX14Q9Y5W7 946 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 PXDNLA1KZ92 1463 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 AK2P54819 239 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 GIMAP6Q6P9H5 292 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 ORAI2Q96SN7 254 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 STK31Q9BXU1 1019 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 LIMCH1Q9UPQ0 1083 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 SMC3Q9UQE7 1217 aa12.58□□□□□ -0.4
LINC01343-201ENST00000431311 SGSM2O43147 1006 aa12.57□□□□□ -0.4
LINC01343-201ENST00000431311 CTIFO43310 598 aaKnown RBP12.57□□□□□ -0.4
LINC01343-201ENST00000431311 FOXO3O43524 673 aa12.57□□□□□ -0.4
LINC01343-201ENST00000431311 PSME1Q06323 249 aa12.57□□□□□ -0.4
LINC01343-201ENST00000431311 MTHFSDQ2M296 383 aaKnown RBP12.57□□□□□ -0.4
LINC01343-201ENST00000431311 RUFY3Q7L099 469 aa12.57□□□□□ -0.4
LINC01343-201ENST00000431311 PHOX2BQ99453 314 aa12.57□□□□□ -0.4
LINC01343-201ENST00000431311 MIS18AQ9NYP9 233 aa12.57□□□□□ -0.4
LINC01343-201ENST00000431311 LMTK3Q96Q04 1460 aa12.56□□□□□ -0.4
LINC01343-201ENST00000431311 SOS1Q07889 1333 aaPredicted RBP12.56□□□□□ -0.4
LINC01343-201ENST00000431311 EN1Q05925 392 aaPredicted RBP12.56□□□□□ -0.4
LINC01343-201ENST00000431311 LSG1Q9H089 658 aaKnown RBP12.56□□□□□ -0.4
LINC01343-201ENST00000431311 CCDC192P0DO97 292 aa12.55□□□□□ -0.4
LINC01343-201ENST00000431311 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
LINC01343-201ENST00000431311 LRRFIP2Q9Y608 721 aaKnown RBP12.55□□□□□ -0.4
LINC01343-201ENST00000431311 PROSER2Q86WR7 435 aaPredicted RBP12.55□□□□□ -0.4
LINC01343-201ENST00000431311 TMUB1Q9BVT8 246 aa12.55□□□□□ -0.4
LINC01343-201ENST00000431311 NFAT5O94916 1531 aa12.55□□□□□ -0.4
LINC01343-201ENST00000431311 RAB11FIP3O75154 756 aa12.54□□□□□ -0.4
LINC01343-201ENST00000431311 DNM1Q05193 864 aaKnown RBP12.54□□□□□ -0.4
LINC01343-201ENST00000431311 SPC24Q8NBT2 197 aa12.54□□□□□ -0.4
LINC01343-201ENST00000431311 PI4K2BQ8TCG2 481 aa12.54□□□□□ -0.4
LINC01343-201ENST00000431311 IL1RAPL2Q9NP60 686 aa12.54□□□□□ -0.4
LINC01343-201ENST00000431311 MTMR6Q9Y217 621 aa12.54□□□□□ -0.4
LINC01343-201ENST00000431311 GJB2P29033 226 aa12.54□□□□□ -0.4
LINC01343-201ENST00000431311 SYCP1Q15431 976 aa12.54□□□□□ -0.4
LINC01343-201ENST00000431311 CCDC30Q5VVM6 783 aa12.54□□□□□ -0.4
LINC01343-201ENST00000431311 NUTM1Q86Y26 1132 aa12.54□□□□□ -0.4
LINC01343-201ENST00000431311 FAM200AQ8TCP9 573 aa12.54□□□□□ -0.4
LINC01343-201ENST00000431311 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
LINC01343-201ENST00000431311 PCMTD1Q96MG8 357 aaPredicted RBP12.54□□□□□ -0.4
LINC01343-201ENST00000431311 LTN1O94822 1766 aa12.53□□□□□ -0.4
LINC01343-201ENST00000431311 POTEFA5A3E0 1075 aa12.53□□□□□ -0.4
LINC01343-201ENST00000431311 LARGE1O95461 756 aa12.53□□□□□ -0.4
LINC01343-201ENST00000431311 CNTROBQ8N137 903 aa12.53□□□□□ -0.4
LINC01343-201ENST00000431311 FEZ1Q99689 392 aa12.53□□□□□ -0.4
LINC01343-201ENST00000431311 MAP3K7O43318 606 aa12.53□□□□□ -0.4
LINC01343-201ENST00000431311 U2AF2P26368 475 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC01343-201ENST00000431311 IP6K1Q92551 441 aa12.53□□□□□ -0.4
LINC01343-201ENST00000431311 ZSCAN31Q96LW9 406 aaPredicted RBP12.53□□□□□ -0.4
LINC01343-201ENST00000431311 C19orf44Q9H6X5 657 aa12.53□□□□□ -0.4
LINC01343-201ENST00000431311 MAP4K4O95819 1239 aaPredicted RBP12.52□□□□□ -0.41
LINC01343-201ENST00000431311 UBTFL1P0CB47 393 aaPredicted RBP12.52□□□□□ -0.41
LINC01343-201ENST00000431311 TSR1Q2NL82 804 aaKnown RBP12.52□□□□□ -0.41
LINC01343-201ENST00000431311 CCDC83Q8IWF9 413 aa12.52□□□□□ -0.41
LINC01343-201ENST00000431311 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.41
LINC01343-201ENST00000431311 SH2B1Q9NRF2 756 aaPredicted RBP12.52□□□□□ -0.41
LINC01343-201ENST00000431311 HYPKQ9NX55 129 aa12.52□□□□□ -0.41
LINC01343-201ENST00000431311 CASTP20810 708 aaKnown RBP12.51□□□□□ -0.41
LINC01343-201ENST00000431311 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
LINC01343-201ENST00000431311 USP44Q9H0E7 712 aa12.51□□□□□ -0.41
LINC01343-201ENST00000431311 SLC34A2O95436 690 aa12.51□□□□□ -0.41
LINC01343-201ENST00000431311 PTGS1P23219 599 aa12.51□□□□□ -0.41
LINC01343-201ENST00000431311 MAP3K11Q16584 847 aa12.51□□□□□ -0.41
LINC01343-201ENST00000431311 VPS53Q5VIR6 699 aa12.51□□□□□ -0.41
LINC01343-201ENST00000431311 KCNH5Q8NCM2 988 aa12.51□□□□□ -0.41
LINC01343-201ENST00000431311 RHPN1Q8TCX5 695 aa12.51□□□□□ -0.41
LINC01343-201ENST00000431311 C1orf167Q5SNV9 1468 aa12.51□□□□□ -0.41
LINC01343-201ENST00000431311 STRCP1A6NGW2 1772 aa12.51□□□□□ -0.41
LINC01343-201ENST00000431311 MAP3K5Q99683 1374 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 SMTNL1A8MU46 457 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 NCBP1Q09161 790 aaKnown RBP12.5□□□□□ -0.41
LINC01343-201ENST00000431311 NUP62CLQ9H1M0 184 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 MRVI1Q9Y6F6 885 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 ELP1O95163 1332 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 CCDC171Q6TFL3 1326 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 SURF6O75683 361 aaKnown RBP12.5□□□□□ -0.41
LINC01343-201ENST00000431311 TYRO3Q06418 890 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 SH3D19Q5HYK7 790 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 KIF1BPQ96EK5 621 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 TM6SF1Q9BZW5 370 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 GPCPD1Q9NPB8 672 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 PDRG1Q9NUG6 133 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 OGFRQ9NZT2 677 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 PCDHGA10Q9Y5H3 936 aa12.5□□□□□ -0.41
LINC01343-201ENST00000431311 TRPM3Q9HCF6 1732 aaPredicted RBP12.49□□□□□ -0.41
LINC01343-201ENST00000431311 PHRF1Q9P1Y6 1649 aaKnown RBP12.49□□□□□ -0.41
LINC01343-201ENST00000431311 VPS37CA5D8V6 355 aaPredicted RBP12.49□□□□□ -0.41
LINC01343-201ENST00000431311 GCP02774 474 aa12.49□□□□□ -0.41
LINC01343-201ENST00000431311 PDIA4P13667 645 aaKnown RBP12.49□□□□□ -0.41
LINC01343-201ENST00000431311 CPA1P15085 419 aa12.49□□□□□ -0.41
LINC01343-201ENST00000431311 KRT85P78386 507 aa12.49□□□□□ -0.41
LINC01343-201ENST00000431311 CWC27Q6UX04 472 aaKnown RBP12.49□□□□□ -0.41
LINC01343-201ENST00000431311 USHBP1Q8N6Y0 703 aa12.49□□□□□ -0.41
LINC01343-201ENST00000431311 EPAS1Q99814 870 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms