RNA–Protein interactions for RNA: ENST00000430317.2

COL6A4P2-201, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-201ENST00000430317 RTL9Q8NET4 1388 aa11.15□□□□□ -0.63
COL6A4P2-201ENST00000430317 ZBTB7AO95365 584 aa11.14□□□□□ -0.63
COL6A4P2-201ENST00000430317 PDE6BP35913 854 aa11.14□□□□□ -0.63
COL6A4P2-201ENST00000430317 CTSWP56202 376 aa11.14□□□□□ -0.63
COL6A4P2-201ENST00000430317 IRX6P78412 446 aaPredicted RBP11.14□□□□□ -0.63
COL6A4P2-201ENST00000430317 RABL6Q3YEC7 729 aaPredicted RBP11.14□□□□□ -0.63
COL6A4P2-201ENST00000430317 BRIP1Q9BX63 1249 aa11.14□□□□□ -0.63
COL6A4P2-201ENST00000430317 C10orf71Q711Q0 1435 aa11.14□□□□□ -0.63
COL6A4P2-201ENST00000430317 ABCC12Q96J65 1359 aa11.14□□□□□ -0.63
COL6A4P2-201ENST00000430317 ERFEQ4G0M1 354 aa11.13□□□□□ -0.63
COL6A4P2-201ENST00000430317 RTL5Q5HYW3 569 aaPredicted RBP11.13□□□□□ -0.63
COL6A4P2-201ENST00000430317 NUTM1Q86Y26 1132 aa11.13□□□□□ -0.63
COL6A4P2-201ENST00000430317 SUCLG2Q96I99 432 aa11.13□□□□□ -0.63
COL6A4P2-201ENST00000430317 IFIT5Q13325 482 aaKnown RBP11.12□□□□□ -0.63
COL6A4P2-201ENST00000430317 SF3B3Q15393 1217 aaKnown RBP11.12□□□□□ -0.63
COL6A4P2-201ENST00000430317 CCDC57Q2TAC2 916 aa11.12□□□□□ -0.63
COL6A4P2-201ENST00000430317 HSP90AB4PQ58FF6 505 aa11.12□□□□□ -0.63
COL6A4P2-201ENST00000430317 CEP85Q6P2H3 762 aa11.12□□□□□ -0.63
COL6A4P2-201ENST00000430317 ANKRD44Q8N8A2 993 aa11.12□□□□□ -0.63
COL6A4P2-201ENST00000430317 RPGRQ92834 1020 aaKnown RBP11.12□□□□□ -0.63
COL6A4P2-201ENST00000430317 CDC5LQ99459 802 aaKnown RBP11.12□□□□□ -0.63
COL6A4P2-201ENST00000430317 PDGFDQ9GZP0 370 aaPredicted RBP11.12□□□□□ -0.63
COL6A4P2-201ENST00000430317 BICC1Q9H694 974 aaKnown RBP11.12□□□□□ -0.63
COL6A4P2-201ENST00000430317 ANKRD18BA2A2Z9 1011 aa11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 SRGAP3O43295 1099 aa11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 CSF1RP07333 972 aa11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 HCLS1P14317 486 aaPredicted RBP11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 CRY2Q49AN0 593 aa11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 TAF7LQ5H9L4 462 aa11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 LMBR1LQ6UX01 489 aa11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 TMC4Q7Z404 712 aa11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 RWDD1Q9H446 243 aaPredicted RBP11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 FBXO3Q9UK99 471 aa11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 KIF13BQ9NQT8 1826 aa11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 TNRC6CQ9HCJ0 1690 aaKnown RBP11.11□□□□□ -0.63
COL6A4P2-201ENST00000430317 KLRG2A4D1S0 409 aaPredicted RBP11.1□□□□□ -0.63
COL6A4P2-201ENST00000430317 FOXO4P98177 505 aa11.1□□□□□ -0.63
COL6A4P2-201ENST00000430317 ATP8B2P98198 1209 aa11.1□□□□□ -0.63
COL6A4P2-201ENST00000430317 HDAC1Q13547 482 aaPredicted RBP11.1□□□□□ -0.63
COL6A4P2-201ENST00000430317 DDX46Q7L014 1031 aaKnown RBP11.1□□□□□ -0.63
COL6A4P2-201ENST00000430317 TTLL11Q8NHH1 800 aa11.1□□□□□ -0.63
COL6A4P2-201ENST00000430317 RBM17Q96I25 401 aaKnown RBP11.1□□□□□ -0.63
COL6A4P2-201ENST00000430317 KAZALD1Q96I82 304 aa11.1□□□□□ -0.63
COL6A4P2-201ENST00000430317 C1orf115Q9H7X2 142 aa11.1□□□□□ -0.63
COL6A4P2-201ENST00000430317 PPP4R2Q9NY27 417 aa11.1□□□□□ -0.63
COL6A4P2-201ENST00000430317 ATF5Q9Y2D1 282 aaPredicted RBP11.1□□□□□ -0.63
COL6A4P2-201ENST00000430317 CD2APQ9Y5K6 639 aa11.1□□□□□ -0.63
COL6A4P2-201ENST00000430317 LRP5O75197 1615 aa11.09□□□□□ -0.63
COL6A4P2-201ENST00000430317 ANKRD31Q8N7Z5 1873 aa11.09□□□□□ -0.63
COL6A4P2-201ENST00000430317 H0YIN7 160 aa11.09□□□□□ -0.63
COL6A4P2-201ENST00000430317 NPR1P16066 1061 aa11.09□□□□□ -0.63
COL6A4P2-201ENST00000430317 IGHMBP2P38935 993 aaKnown RBP11.09□□□□□ -0.63
COL6A4P2-201ENST00000430317 TGFB2P61812 414 aa11.09□□□□□ -0.63
COL6A4P2-201ENST00000430317 ERC1Q8IUD2 1116 aa11.09□□□□□ -0.63
COL6A4P2-201ENST00000430317 SSH3Q8TE77 659 aa11.09□□□□□ -0.63
COL6A4P2-201ENST00000430317 CCDC136Q96JN2 1154 aa11.09□□□□□ -0.63
COL6A4P2-201ENST00000430317 SGIP1Q9BQI5 828 aa11.09□□□□□ -0.63
COL6A4P2-201ENST00000430317 DLEC1Q9Y238 1755 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 ITGA6P23229 1130 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 ALDH1B1P30837 517 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 HOXA10P31260 410 aaPredicted RBP11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 PTGER2P43116 358 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 FAM161AQ3B820 660 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 EPHA10Q5JZY3 1008 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 STYK1Q6J9G0 422 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 ANKRD18AQ8IVF6 992 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 JARID2Q92833 1246 aaPredicted RBP11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 GCC1Q96CN9 775 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 MASTLQ96GX5 879 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 CRAMP1Q96RY5 1269 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 MPHOSPH8Q99549 860 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 TMX4Q9H1E5 349 aaPredicted RBP11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 COPRSQ9NQ92 184 aa11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 PPP1R1BQ9UD71 204 aaPredicted RBP11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
COL6A4P2-201ENST00000430317 C19orf67A6NJJ6 358 aa11.07□□□□□ -0.64
COL6A4P2-201ENST00000430317 CIAO1O76071 339 aa11.07□□□□□ -0.64
COL6A4P2-201ENST00000430317 OS9Q13438 667 aaPredicted RBP11.07□□□□□ -0.64
COL6A4P2-201ENST00000430317 GRAPQ13588 217 aa11.07□□□□□ -0.64
COL6A4P2-201ENST00000430317 SYNE4Q8N205 404 aa11.07□□□□□ -0.64
COL6A4P2-201ENST00000430317 GRAPLQ8TC17 118 aaPredicted RBP11.07□□□□□ -0.64
COL6A4P2-201ENST00000430317 CNKSR1Q969H4 720 aa11.07□□□□□ -0.64
COL6A4P2-201ENST00000430317 GREM2Q9H772 168 aa11.07□□□□□ -0.64
COL6A4P2-201ENST00000430317 PCDHB15Q9Y5E8 787 aa11.07□□□□□ -0.64
COL6A4P2-201ENST00000430317 COL11A2P13942 1736 aaPredicted RBP11.06□□□□□ -0.64
COL6A4P2-201ENST00000430317 PNMA6EA0A0J9YXQ4 647 aa11.06□□□□□ -0.64
COL6A4P2-201ENST00000430317 RAB11FIP3O75154 756 aa11.06□□□□□ -0.64
COL6A4P2-201ENST00000430317 BBOX1O75936 387 aa11.06□□□□□ -0.64
COL6A4P2-201ENST00000430317 SRGNP10124 158 aa11.06□□□□□ -0.64
COL6A4P2-201ENST00000430317 IL15P40933 162 aaPredicted RBP11.06□□□□□ -0.64
COL6A4P2-201ENST00000430317 G3BP1Q13283 466 aaKnown RBP eCLIP11.06□□□□□ -0.64
COL6A4P2-201ENST00000430317 CENPQQ7L2Z9 268 aaPredicted RBP11.06□□□□□ -0.64
COL6A4P2-201ENST00000430317 C2CD5Q86YS7 1000 aa11.06□□□□□ -0.64
COL6A4P2-201ENST00000430317 EYA2O00167 538 aa11.05□□□□□ -0.64
COL6A4P2-201ENST00000430317 SURF6O75683 361 aaKnown RBP11.05□□□□□ -0.64
COL6A4P2-201ENST00000430317 GRIPAP1Q4V328 841 aa11.05□□□□□ -0.64
COL6A4P2-201ENST00000430317 SOGA3Q5TF21 947 aa11.05□□□□□ -0.64
COL6A4P2-201ENST00000430317 LDHAL6AQ6ZMR3 332 aa11.05□□□□□ -0.64
COL6A4P2-201ENST00000430317 CCDC24Q8N4L8 307 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms