RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.97■□□□□ 0.791e-6■■■■■ 115.7
SMARCA4-203ENST00000429416 MCM9Q9NXL9 1143 aa19.97■□□□□ 0.79
SMARCA4-203ENST00000429416 SSRP1Q08945 709 aaKnown RBP19.97■□□□□ 0.79
SMARCA4-203ENST00000429416 UNC5CLQ8IV45 518 aa19.97■□□□□ 0.79
SMARCA4-203ENST00000429416 METTL22Q9BUU2 404 aaPredicted RBP19.97■□□□□ 0.79
SMARCA4-203ENST00000429416 CAVIN1Q6NZI2 390 aaKnown RBP19.96■□□□□ 0.79
SMARCA4-203ENST00000429416 VTI1AQ96AJ9 217 aa19.96■□□□□ 0.79
SMARCA4-203ENST00000429416 C8orf76Q96K31 380 aa19.96■□□□□ 0.79
SMARCA4-203ENST00000429416 FILIP1LQ4L180 1135 aa19.96■□□□□ 0.79
SMARCA4-203ENST00000429416 CCDC191Q8NCU4 936 aa19.96■□□□□ 0.79
SMARCA4-203ENST00000429416 NCOA7Q8NI08 942 aa19.96■□□□□ 0.79
SMARCA4-203ENST00000429416 KCNQ4P56696 695 aa19.96■□□□□ 0.79
SMARCA4-203ENST00000429416 ARHGAP27Q6ZUM4 889 aa19.96■□□□□ 0.79
SMARCA4-203ENST00000429416 ARID3AQ99856 593 aa19.96■□□□□ 0.79
SMARCA4-203ENST00000429416 CARD10Q9BWT7 1032 aa19.96■□□□□ 0.79
SMARCA4-203ENST00000429416 PLCG2P16885 1265 aa19.95■□□□□ 0.78
SMARCA4-203ENST00000429416 EAPPQ56P03 285 aaPredicted RBP19.95■□□□□ 0.78
SMARCA4-203ENST00000429416 MAGEB6Q8N7X4 407 aa19.95■□□□□ 0.78
SMARCA4-203ENST00000429416 PER1O15534 1290 aaPredicted RBP19.95■□□□□ 0.78
SMARCA4-203ENST00000429416 CFAP45Q9UL16 551 aa19.95■□□□□ 0.78
SMARCA4-203ENST00000429416 SMC2O95347 1197 aa19.95■□□□□ 0.78
SMARCA4-203ENST00000429416 PRKG1Q13976 671 aa19.95■□□□□ 0.78
SMARCA4-203ENST00000429416 PAG1Q9NWQ8 432 aa19.95■□□□□ 0.78
SMARCA4-203ENST00000429416 LOC102724428A0A0B4J2F2 783 aa19.94■□□□□ 0.78
SMARCA4-203ENST00000429416 HIBADHP31937 336 aaKnown RBP19.94■□□□□ 0.78
SMARCA4-203ENST00000429416 SIK1P57059 783 aa19.94■□□□□ 0.78
SMARCA4-203ENST00000429416 CEP131Q9UPN4 1083 aa19.94■□□□□ 0.78
SMARCA4-203ENST00000429416 CEP57L1Q8IYX8 460 aa19.94■□□□□ 0.78
SMARCA4-203ENST00000429416 ANKRD44Q8N8A2 993 aa19.94■□□□□ 0.78
SMARCA4-203ENST00000429416 SAMM50Q9Y512 469 aa19.94■□□□□ 0.78
SMARCA4-203ENST00000429416 CCDC70Q6NSX1 233 aa19.93■□□□□ 0.78
SMARCA4-203ENST00000429416 NIM1KQ8IY84 436 aa19.93■□□□□ 0.78
SMARCA4-203ENST00000429416 USP16Q9Y5T5 823 aa19.93■□□□□ 0.78
SMARCA4-203ENST00000429416 TAF5LO75529 589 aa19.93■□□□□ 0.78
SMARCA4-203ENST00000429416 LIG1P18858 919 aa19.93■□□□□ 0.78
SMARCA4-203ENST00000429416 ALDH1B1P30837 517 aa19.93■□□□□ 0.78
SMARCA4-203ENST00000429416 ESR2Q92731 530 aa19.93■□□□□ 0.78
SMARCA4-203ENST00000429416 ZNF594Q96JF6 807 aaPredicted RBP19.93■□□□□ 0.78
SMARCA4-203ENST00000429416 MPHOSPH6Q99547 160 aaKnown RBP19.93■□□□□ 0.78
SMARCA4-203ENST00000429416 MBD3O95983 291 aa19.93■□□□□ 0.78
SMARCA4-203ENST00000429416 ARHGEF25Q86VW2 580 aa19.93■□□□□ 0.78
SMARCA4-203ENST00000429416 PPIP5K2O43314 1243 aa19.92■□□□□ 0.78
SMARCA4-203ENST00000429416 PDE6BP35913 854 aa19.92■□□□□ 0.78
SMARCA4-203ENST00000429416 CERKQ8TCT0 537 aa19.92■□□□□ 0.78
SMARCA4-203ENST00000429416 AFF2P51816 1311 aa19.92■□□□□ 0.78
SMARCA4-203ENST00000429416 TTLL5Q6EMB2 1281 aa19.92■□□□□ 0.78
SMARCA4-203ENST00000429416 TMEM87AQ8NBN3 555 aa19.92■□□□□ 0.78
SMARCA4-203ENST00000429416 CCDC12Q8WUD4 166 aaPredicted RBP19.92■□□□□ 0.78
SMARCA4-203ENST00000429416 BIN2Q9UBW5 565 aaPredicted RBP19.92■□□□□ 0.78
SMARCA4-203ENST00000429416 PTPRTO14522 1441 aa19.92■□□□□ 0.78
SMARCA4-203ENST00000429416 WTAPQ15007 396 aa19.92■□□□□ 0.78
SMARCA4-203ENST00000429416 IARSP41252 1262 aaKnown RBP19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 TIMM10P62072 90 aa19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 NEK1Q96PY6 1258 aa19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 BACH2Q9BYV9 841 aa19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 ASAP1Q9ULH1 1129 aa19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 TNNQ9UQP3 1299 aa19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 IFIT1BQ5T764 474 aaKnown RBP19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 SUPT20HQ8NEM7 779 aa19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 UBA5Q9GZZ9 404 aa19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 TMEM266Q2M3C6 531 aa19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 KLHDC4Q8TBB5 520 aa19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 RAB34Q9BZG1 259 aa19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 BABAM1Q9NWV8 329 aa19.91■□□□□ 0.78
SMARCA4-203ENST00000429416 METAP2P50579 478 aaKnown RBP eCLIP19.9■□□□□ 0.789e-7■■□□□ 12.7
SMARCA4-203ENST00000429416 C2CD5Q86YS7 1000 aa19.9■□□□□ 0.78
SMARCA4-203ENST00000429416 MPNDQ8N594 471 aa19.9■□□□□ 0.78
SMARCA4-203ENST00000429416 BEGAINQ9BUH8 593 aa19.9■□□□□ 0.78
SMARCA4-203ENST00000429416 TRIM5Q9C035 493 aa19.9■□□□□ 0.78
SMARCA4-203ENST00000429416 ATF5Q9Y2D1 282 aaPredicted RBP19.9■□□□□ 0.78
SMARCA4-203ENST00000429416 KCNQ3O43525 872 aa19.9■□□□□ 0.78
SMARCA4-203ENST00000429416 TNMDQ9H2S6 317 aa19.9■□□□□ 0.78
SMARCA4-203ENST00000429416 DENND2AQ9ULE3 1009 aa19.9■□□□□ 0.78
SMARCA4-203ENST00000429416 USPL1Q5W0Q7 1092 aa19.9■□□□□ 0.78
SMARCA4-203ENST00000429416 NLGN1Q8N2Q7 840 aa19.89■□□□□ 0.78
SMARCA4-203ENST00000429416 KRT23Q9C075 422 aa19.89■□□□□ 0.78
SMARCA4-203ENST00000429416 WDR17Q8IZU2 1322 aa19.89■□□□□ 0.77
SMARCA4-203ENST00000429416 HOXB7P09629 217 aa19.89■□□□□ 0.77
SMARCA4-203ENST00000429416 TEX11Q8IYF3 940 aa19.89■□□□□ 0.77
SMARCA4-203ENST00000429416 MCM5P33992 734 aa19.89■□□□□ 0.77
SMARCA4-203ENST00000429416 MCMDC2Q4G0Z9 681 aa19.89■□□□□ 0.77
SMARCA4-203ENST00000429416 TTC22Q5TAA0 569 aa19.89■□□□□ 0.77
SMARCA4-203ENST00000429416 SLC26A6Q9BXS9 759 aa19.89■□□□□ 0.77
SMARCA4-203ENST00000429416 EYA2O00167 538 aa19.89■□□□□ 0.77
SMARCA4-203ENST00000429416 SOS1Q07889 1333 aaPredicted RBP19.89■□□□□ 0.77
SMARCA4-203ENST00000429416 CHL1O00533 1208 aa19.88■□□□□ 0.77
SMARCA4-203ENST00000429416 EIF4A1P60842 406 aaKnown RBP19.88■□□□□ 0.77
SMARCA4-203ENST00000429416 SAP30BPQ9UHR5 308 aaKnown RBP19.88■□□□□ 0.77
SMARCA4-203ENST00000429416 BAG4O95429 457 aaKnown RBP19.88■□□□□ 0.77
SMARCA4-203ENST00000429416 PDE1AP54750 535 aa19.88■□□□□ 0.77
SMARCA4-203ENST00000429416 GOLGA6L1Q8N7Z2 621 aa19.88■□□□□ 0.77
SMARCA4-203ENST00000429416 LRRC2Q9BYS8 371 aa19.88■□□□□ 0.77
SMARCA4-203ENST00000429416 DPY19L2Q6NUT2 758 aa19.88■□□□□ 0.77
SMARCA4-203ENST00000429416 IGHDP01880 384 aa19.88■□□□□ 0.77
SMARCA4-203ENST00000429416 PUM3Q15397 648 aaKnown RBP19.87■□□□□ 0.77
SMARCA4-203ENST00000429416 PPP4R3BQ5MIZ7 849 aa19.87■□□□□ 0.77
SMARCA4-203ENST00000429416 SERPINC1P01008 464 aa19.87■□□□□ 0.77
SMARCA4-203ENST00000429416 A0A1B0GUL7 405 aa19.87■□□□□ 0.77
SMARCA4-203ENST00000429416 RAB3GAP1Q15042 981 aa19.87■□□□□ 0.77
SMARCA4-203ENST00000429416 SH2B1Q9NRF2 756 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms