RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ANKRD24Q8TF21 1146 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 TLR7Q9NYK1 1049 aaKnown RBP9.55□□□□□ -0.88
HPS4-205ENST00000429411 USP32Q8NFA0 1604 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 COPS6Q7L5N1 327 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 CHST3Q7LGC8 479 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 PIAS4Q8N2W9 510 aaPredicted RBP9.55□□□□□ -0.88
HPS4-205ENST00000429411 MTMR7Q9Y216 660 aa9.55□□□□□ -0.88
HPS4-205ENST00000429411 NPHP1O15259 732 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 ZNF142P52746 1687 aaPredicted RBP9.54□□□□□ -0.88
HPS4-205ENST00000429411 SPATA31A6Q5VVP1 1343 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 XAGE3Q8WTP9 111 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 CRB1P82279 1406 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 ARHGEF10O15013 1369 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 GRM8O00222 908 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 TRIM37O94972 964 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 KCNQ4P56696 695 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 WASHC4Q2M389 1173 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 CREB3L3Q68CJ9 461 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 SUCLG2Q96I99 432 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 GJD4Q96KN9 370 aaPredicted RBP9.54□□□□□ -0.88
HPS4-205ENST00000429411 UTRNP46939 3433 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 RBM6P78332 1123 aaKnown RBP9.54□□□□□ -0.88
HPS4-205ENST00000429411 ME3Q16798 604 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 BEND3Q5T5X7 828 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 FAM177A1Q8N128 213 aaPredicted RBP9.54□□□□□ -0.88
HPS4-205ENST00000429411 NFATC2IPQ8NCF5 419 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 EVI5LQ96CN4 794 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 SIRT1Q96EB6 747 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 DACT1Q9NYF0 836 aa9.54□□□□□ -0.88
HPS4-205ENST00000429411 CUL4AQ13619 759 aa9.53□□□□□ -0.88
HPS4-205ENST00000429411 MAP3K11Q16584 847 aa9.53□□□□□ -0.88
HPS4-205ENST00000429411 LUZP1Q86V48 1076 aa9.53□□□□□ -0.88
HPS4-205ENST00000429411 PI4K2BQ8TCG2 481 aa9.53□□□□□ -0.88
HPS4-205ENST00000429411 FKBP4Q02790 459 aaKnown RBP eCLIP9.53□□□□□ -0.88
HPS4-205ENST00000429411 GNL2Q13823 731 aaKnown RBP9.53□□□□□ -0.88
HPS4-205ENST00000429411 KSR2Q6VAB6 950 aa9.53□□□□□ -0.88
HPS4-205ENST00000429411 CDC37L1Q7L3B6 337 aa9.53□□□□□ -0.88
HPS4-205ENST00000429411 FILIP1Q7Z7B0 1213 aa9.53□□□□□ -0.88
HPS4-205ENST00000429411 EAF2Q96CJ1 260 aaPredicted RBP9.53□□□□□ -0.88
HPS4-205ENST00000429411 LSG1Q9H089 658 aaKnown RBP9.53□□□□□ -0.88
HPS4-205ENST00000429411 SNRKQ9NRH2 765 aa9.53□□□□□ -0.88
HPS4-205ENST00000429411 WWC3Q9ULE0 1092 aa9.53□□□□□ -0.88
HPS4-205ENST00000429411 RGS12O14924 1447 aa9.53□□□□□ -0.88
HPS4-205ENST00000429411 A0A087WZG4 1122 aa9.52□□□□□ -0.88
HPS4-205ENST00000429411 HTATSF1O43719 755 aaKnown RBP9.52□□□□□ -0.88
HPS4-205ENST00000429411 NOLC1Q14978 699 aaKnown RBP eCLIP9.52□□□□□ -0.88
HPS4-205ENST00000429411 ZSCAN31Q96LW9 406 aaPredicted RBP9.52□□□□□ -0.88
HPS4-205ENST00000429411 PPP1R1BQ9UD71 204 aaPredicted RBP9.52□□□□□ -0.88
HPS4-205ENST00000429411 STAP2Q9UGK3 403 aa9.52□□□□□ -0.88
HPS4-205ENST00000429411 A0A0D9SFI3 127 aa9.52□□□□□ -0.89
HPS4-205ENST00000429411 CHGBP05060 677 aa9.52□□□□□ -0.89
HPS4-205ENST00000429411 PDCP20941 246 aa9.52□□□□□ -0.89
HPS4-205ENST00000429411 BRF1Q92994 677 aa9.52□□□□□ -0.89
HPS4-205ENST00000429411 C16orf45Q96MC5 204 aaPredicted RBP9.52□□□□□ -0.89
HPS4-205ENST00000429411 SEC62Q99442 399 aaKnown RBP9.52□□□□□ -0.89
HPS4-205ENST00000429411 PDCL3Q9H2J4 239 aa9.52□□□□□ -0.89
HPS4-205ENST00000429411 CCDC171Q6TFL3 1326 aa9.52□□□□□ -0.89
HPS4-205ENST00000429411 JAK2O60674 1132 aa9.52□□□□□ -0.89
HPS4-205ENST00000429411 FAM193AP78312 1265 aa9.52□□□□□ -0.89
HPS4-205ENST00000429411 KCNH5Q8NCM2 988 aa9.52□□□□□ -0.89
HPS4-205ENST00000429411 ERCC4Q92889 916 aaPredicted RBP9.52□□□□□ -0.89
HPS4-205ENST00000429411 TOMM22Q9NS69 142 aa9.52□□□□□ -0.89
HPS4-205ENST00000429411 TPCN1Q9ULQ1 816 aa9.52□□□□□ -0.89
HPS4-205ENST00000429411 STRCP1A6NGW2 1772 aa9.52□□□□□ -0.89
HPS4-205ENST00000429411 GOLIM4O00461 696 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 LETM1O95202 739 aaPredicted RBP9.51□□□□□ -0.89
HPS4-205ENST00000429411 APPP05067 770 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 ADRA2BP18089 450 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 ME1P48163 572 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 HAND2P61296 217 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 CBX1P83916 185 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 HSP90AB3PQ58FF7 597 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 AKAP4Q5JQC9 854 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 IP6K1Q92551 441 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 A0A087WWV3 80 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 RNMTO43148 476 aaKnown RBP9.51□□□□□ -0.89
HPS4-205ENST00000429411 DDB1Q16531 1140 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 CLEC17AQ6ZS10 378 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 SDF4Q9BRK5 362 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 SH2B1Q9NRF2 756 aaPredicted RBP9.51□□□□□ -0.89
HPS4-205ENST00000429411 KIF20BQ96Q89 1820 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 PSDA5PKW4 1024 aaPredicted RBP9.51□□□□□ -0.89
HPS4-205ENST00000429411 TATP17735 454 aaPredicted RBP9.51□□□□□ -0.89
HPS4-205ENST00000429411 LIG1P18858 919 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 SLFNL1Q499Z3 407 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 ANO6Q4KMQ2 910 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 HYPKQ9NX55 129 aa9.51□□□□□ -0.89
HPS4-205ENST00000429411 SPDYE4A6NLX3 237 aa9.5□□□□□ -0.89
HPS4-205ENST00000429411 HIP1O00291 1037 aa9.5□□□□□ -0.89
HPS4-205ENST00000429411 EXOC5O00471 708 aa9.5□□□□□ -0.89
HPS4-205ENST00000429411 SLC27A2O14975 620 aa9.5□□□□□ -0.89
HPS4-205ENST00000429411 PTGS1P23219 599 aa9.5□□□□□ -0.89
HPS4-205ENST00000429411 TFCP2Q12800 502 aa9.5□□□□□ -0.89
HPS4-205ENST00000429411 CCDC73Q6ZRK6 1079 aa9.5□□□□□ -0.89
HPS4-205ENST00000429411 DNAJC25Q9H1X3 360 aa9.5□□□□□ -0.89
HPS4-205ENST00000429411 MTMR6Q9Y217 621 aa9.5□□□□□ -0.89
HPS4-205ENST00000429411 TPD52L1Q16890 204 aaPredicted RBP9.5□□□□□ -0.89
HPS4-205ENST00000429411 CCDC186Q7Z3E2 898 aa9.5□□□□□ -0.89
HPS4-205ENST00000429411 LINS1Q8NG48 757 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms