RNA–Protein interactions for RNA: ENST00000428969.1

PCCA-206, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-206ENST00000428969 CIAPIN1Q6FI81 312 aa17.06■□□□□ 0.32
PCCA-206ENST00000428969 TMC4Q7Z404 712 aa17.06■□□□□ 0.32
PCCA-206ENST00000428969 BRPF1P55201 1214 aaPredicted RBP17.05■□□□□ 0.32
PCCA-206ENST00000428969 DDX46Q7L014 1031 aaKnown RBP17.05■□□□□ 0.32
PCCA-206ENST00000428969 LAMB2P55268 1798 aa17.05■□□□□ 0.32
PCCA-206ENST00000428969 EIF2S2P20042 333 aaKnown RBP17.04■□□□□ 0.32
PCCA-206ENST00000428969 LMOD3Q0VAK6 560 aa17.04■□□□□ 0.32
PCCA-206ENST00000428969 GRAPQ13588 217 aa17.04■□□□□ 0.32
PCCA-206ENST00000428969 CDC37L1Q7L3B6 337 aa17.04■□□□□ 0.32
PCCA-206ENST00000428969 NLRP10Q86W26 655 aa17.04■□□□□ 0.32
PCCA-206ENST00000428969 GRAPLQ8TC17 118 aaPredicted RBP17.04■□□□□ 0.32
PCCA-206ENST00000428969 BCL2L13Q9BXK5 485 aa17.04■□□□□ 0.32
PCCA-206ENST00000428969 SH3TC1Q8TE82 1336 aa17.03■□□□□ 0.32
PCCA-206ENST00000428969 RGS19P49795 217 aa17.03■□□□□ 0.32
PCCA-206ENST00000428969 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
PCCA-206ENST00000428969 GLIS2Q9BZE0 524 aaPredicted RBP17.03■□□□□ 0.32
PCCA-206ENST00000428969 AOC2O75106 756 aa17.02■□□□□ 0.32
PCCA-206ENST00000428969 TCIRG1Q13488 830 aa17.02■□□□□ 0.32
PCCA-206ENST00000428969 PROSER3Q2NL68 480 aa17.02■□□□□ 0.32
PCCA-206ENST00000428969 COPS6Q7L5N1 327 aa17.02■□□□□ 0.32
PCCA-206ENST00000428969 TRMT112Q9UI30 125 aaKnown RBP17.02■□□□□ 0.32
PCCA-206ENST00000428969 LRRC37AA6NMS7 1700 aa17.01■□□□□ 0.31
PCCA-206ENST00000428969 CCDC85CA6NKD9 419 aa17.01■□□□□ 0.31
PCCA-206ENST00000428969 H7C1D1 291 aa17.01■□□□□ 0.31
PCCA-206ENST00000428969 RAD17O75943 681 aa17.01■□□□□ 0.31
PCCA-206ENST00000428969 HCLS1P14317 486 aaPredicted RBP17.01■□□□□ 0.31
PCCA-206ENST00000428969 RIPK4P57078 832 aa17.01■□□□□ 0.31
PCCA-206ENST00000428969 CNOT7Q9UIV1 285 aaKnown RBP17.01■□□□□ 0.31
PCCA-206ENST00000428969 SLC34A2O95436 690 aa17■□□□□ 0.31
PCCA-206ENST00000428969 ANXA1P04083 346 aa17■□□□□ 0.31
PCCA-206ENST00000428969 HIRAP54198 1017 aaPredicted RBP17■□□□□ 0.31
PCCA-206ENST00000428969 MLLT1Q03111 559 aaPredicted RBP17■□□□□ 0.31
PCCA-206ENST00000428969 NOGQ13253 232 aa17■□□□□ 0.31
PCCA-206ENST00000428969 TRPM4Q8TD43 1214 aa17■□□□□ 0.31
PCCA-206ENST00000428969 XAGE3Q8WTP9 111 aa17■□□□□ 0.31
PCCA-206ENST00000428969 DPF2Q92785 391 aa17■□□□□ 0.31
PCCA-206ENST00000428969 DUOX1Q9NRD9 1551 aa17■□□□□ 0.31
PCCA-206ENST00000428969 AIMP1Q12904 312 aaKnown RBP16.99■□□□□ 0.31
PCCA-206ENST00000428969 TSKSQ9UJT2 592 aa16.99■□□□□ 0.31
PCCA-206ENST00000428969 YDJCA8MPS7 323 aa16.98■□□□□ 0.31
PCCA-206ENST00000428969 MICALL2Q8IY33 904 aa16.98■□□□□ 0.31
PCCA-206ENST00000428969 ZNF408Q9H9D4 720 aa16.98■□□□□ 0.31
PCCA-206ENST00000428969 CASP8AP2Q9UKL3 1982 aa16.97■□□□□ 0.31
PCCA-206ENST00000428969 TMPOP42166 694 aaKnown RBP16.97■□□□□ 0.31
PCCA-206ENST00000428969 WASHC4Q2M389 1173 aa16.97■□□□□ 0.31
PCCA-206ENST00000428969 HOXB7P09629 217 aa16.96■□□□□ 0.31
PCCA-206ENST00000428969 RPS12P25398 132 aaKnown RBP16.96■□□□□ 0.31
PCCA-206ENST00000428969 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
PCCA-206ENST00000428969 PLBD2Q8NHP8 589 aa16.96■□□□□ 0.31
PCCA-206ENST00000428969 MCOLN1Q9GZU1 580 aa16.96■□□□□ 0.31
PCCA-206ENST00000428969 DDX60Q8IY21 1712 aaKnown RBP16.96■□□□□ 0.3
PCCA-206ENST00000428969 TAF1P21675 1872 aa16.95■□□□□ 0.3
PCCA-206ENST00000428969 CHL1O00533 1208 aa16.95■□□□□ 0.3
PCCA-206ENST00000428969 HUNKP57058 714 aa16.95■□□□□ 0.3
PCCA-206ENST00000428969 NECTIN2Q92692 538 aa16.95■□□□□ 0.3
PCCA-206ENST00000428969 PSMD14O00487 310 aa16.94■□□□□ 0.3
PCCA-206ENST00000428969 RALBP1Q15311 655 aa16.94■□□□□ 0.3
PCCA-206ENST00000428969 KRT26Q7Z3Y9 468 aa16.94■□□□□ 0.3
PCCA-206ENST00000428969 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
PCCA-206ENST00000428969 EYA3Q99504 573 aa16.94■□□□□ 0.3
PCCA-206ENST00000428969 ISCA1Q9BUE6 129 aa16.94■□□□□ 0.3
PCCA-206ENST00000428969 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
PCCA-206ENST00000428969 NSFL1CQ9UNZ2 370 aaKnown RBP16.94■□□□□ 0.3
PCCA-206ENST00000428969 ZBTB12Q9Y330 459 aaPredicted RBP16.94■□□□□ 0.3
PCCA-206ENST00000428969 SHTN1A0MZ66 631 aa16.93■□□□□ 0.3
PCCA-206ENST00000428969 ANKRD13DQ6ZTN6 518 aa16.93■□□□□ 0.3
PCCA-206ENST00000428969 SAMD7Q7Z3H4 446 aa16.93■□□□□ 0.3
PCCA-206ENST00000428969 CCDC102AQ96A19 550 aa16.93■□□□□ 0.3
PCCA-206ENST00000428969 DBNDD1Q9H9R9 158 aa16.93■□□□□ 0.3
PCCA-206ENST00000428969 SAGE1Q9NXZ1 904 aa16.93■□□□□ 0.3
PCCA-206ENST00000428969 DBF4Q9UBU7 674 aaPredicted RBP16.93■□□□□ 0.3
PCCA-206ENST00000428969 PDE4DIPQ5VU43 2346 aa16.92■□□□□ 0.3
PCCA-206ENST00000428969 TRIM28Q13263 835 aaKnown RBP16.92■□□□□ 0.3
PCCA-206ENST00000428969 DGKZQ13574 1117 aa16.92■□□□□ 0.3
PCCA-206ENST00000428969 HDGFL1Q5TGJ6 251 aa16.92■□□□□ 0.3
PCCA-206ENST00000428969 RGMBQ6NW40 437 aa16.92■□□□□ 0.3
PCCA-206ENST00000428969 C2orf69Q8N8R5 385 aa16.92■□□□□ 0.3
PCCA-206ENST00000428969 CELF1Q92879 486 aaKnown RBP16.92■□□□□ 0.3
PCCA-206ENST00000428969 DCPSQ96C86 337 aaKnown RBP16.92■□□□□ 0.3
PCCA-206ENST00000428969 GBA2Q9HCG7 927 aaPredicted RBP16.92■□□□□ 0.3
PCCA-206ENST00000428969 FAM155AB1AL88 458 aaPredicted RBP16.91■□□□□ 0.3
PCCA-206ENST00000428969 C6orf229H3BNL8 230 aa16.91■□□□□ 0.3
PCCA-206ENST00000428969 ECE2O60344 883 aa16.91■□□□□ 0.3
PCCA-206ENST00000428969 HSP90B1P14625 803 aaKnown RBP16.91■□□□□ 0.3
PCCA-206ENST00000428969 TBC1D10BQ4KMP7 808 aaPredicted RBP16.91■□□□□ 0.3
PCCA-206ENST00000428969 FAM89AQ96GI7 184 aa16.91■□□□□ 0.3
PCCA-206ENST00000428969 HYPKQ9NX55 129 aa16.91■□□□□ 0.3
PCCA-206ENST00000428969 POLLQ9UGP5 575 aa16.91■□□□□ 0.3
PCCA-206ENST00000428969 POLR2AP24928 1970 aaKnown RBP16.91■□□□□ 0.3
PCCA-206ENST00000428969 GPSM2P81274 684 aa16.9■□□□□ 0.3
PCCA-206ENST00000428969 KRT24Q2M2I5 525 aa16.9■□□□□ 0.3
PCCA-206ENST00000428969 ZNF609O15014 1411 aa16.89■□□□□ 0.29
PCCA-206ENST00000428969 IRS4O14654 1257 aaPredicted RBP16.89■□□□□ 0.29
PCCA-206ENST00000428969 RIMBP2O15034 1052 aa16.89■□□□□ 0.29
PCCA-206ENST00000428969 RPS8P62241 208 aaKnown RBP16.89■□□□□ 0.29
PCCA-206ENST00000428969 SULF1Q8IWU6 871 aa16.89■□□□□ 0.29
PCCA-206ENST00000428969 TBC1D16Q8TBP0 767 aa16.89■□□□□ 0.29
PCCA-206ENST00000428969 CFAP44Q96MT7 982 aa16.89■□□□□ 0.29
PCCA-206ENST00000428969 ZIC5Q96T25 663 aa16.89■□□□□ 0.29
PCCA-206ENST00000428969 PODXL2Q9NZ53 605 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms