RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 LGR6Q9HBX8 967 aa11.39□□□□□ -0.59
HDAC1-202ENST00000428704 SLX4Q8IY92 1834 aa11.38□□□□□ -0.59
HDAC1-202ENST00000428704 RNMTO43148 476 aaKnown RBP11.38□□□□□ -0.59
HDAC1-202ENST00000428704 SCNN1DP51172 638 aa11.38□□□□□ -0.59
HDAC1-202ENST00000428704 ERICH6BQ5W0A0 696 aa11.38□□□□□ -0.59
HDAC1-202ENST00000428704 OLFM4Q6UX06 510 aa11.38□□□□□ -0.59
HDAC1-202ENST00000428704 CFAP53Q96M91 514 aa11.38□□□□□ -0.59
HDAC1-202ENST00000428704 ZIC5Q96T25 663 aa11.38□□□□□ -0.59
HDAC1-202ENST00000428704 SETDB2Q96T68 719 aa11.38□□□□□ -0.59
HDAC1-202ENST00000428704 SAGE1Q9NXZ1 904 aa11.38□□□□□ -0.59
HDAC1-202ENST00000428704 METRNQ9UJH8 293 aa11.38□□□□□ -0.59
HDAC1-202ENST00000428704 HPS5Q9UPZ3 1129 aa11.38□□□□□ -0.59
HDAC1-202ENST00000428704 ZNF330Q9Y3S2 320 aaPredicted RBP11.38□□□□□ -0.59
HDAC1-202ENST00000428704 ANKRD31Q8N7Z5 1873 aa11.38□□□□□ -0.59
HDAC1-202ENST00000428704 DLL1O00548 723 aa11.37□□□□□ -0.59
HDAC1-202ENST00000428704 NPR1P16066 1061 aa11.37□□□□□ -0.59
HDAC1-202ENST00000428704 PRKAR2BP31323 418 aa11.37□□□□□ -0.59
HDAC1-202ENST00000428704 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
HDAC1-202ENST00000428704 PHACTR3Q96KR7 559 aa11.37□□□□□ -0.59
HDAC1-202ENST00000428704 MFRPQ9BY79 579 aa11.37□□□□□ -0.59
HDAC1-202ENST00000428704 SLC52A2Q9HAB3 445 aa11.37□□□□□ -0.59
HDAC1-202ENST00000428704 TRPA1O75762 1119 aa11.36□□□□□ -0.59
HDAC1-202ENST00000428704 FXR1P51114 621 aaKnown RBP eCLIP11.36□□□□□ -0.59
HDAC1-202ENST00000428704 EIF5P55010 431 aaKnown RBP11.36□□□□□ -0.59
HDAC1-202ENST00000428704 SLC39A6Q13433 755 aa11.36□□□□□ -0.59
HDAC1-202ENST00000428704 GLIS2Q9BZE0 524 aaPredicted RBP11.36□□□□□ -0.59
HDAC1-202ENST00000428704 TBC1D2BQ9UPU7 963 aa11.36□□□□□ -0.59
HDAC1-202ENST00000428704 STARD3NLO95772 234 aa11.35□□□□□ -0.59
HDAC1-202ENST00000428704 HUNKP57058 714 aa11.35□□□□□ -0.59
HDAC1-202ENST00000428704 OCEL1Q9H607 264 aa11.35□□□□□ -0.59
HDAC1-202ENST00000428704 ADARB2Q9NS39 739 aaKnown RBP11.35□□□□□ -0.59
HDAC1-202ENST00000428704 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.35□□□□□ -0.59
HDAC1-202ENST00000428704 CEMIPQ8WUJ3 1361 aa11.35□□□□□ -0.59
HDAC1-202ENST00000428704 SEC24BO95487 1268 aa11.34□□□□□ -0.59
HDAC1-202ENST00000428704 NEFLP07196 543 aa11.34□□□□□ -0.59
HDAC1-202ENST00000428704 U2AF1L5P0DN76 240 aaPredicted RBP11.34□□□□□ -0.59
HDAC1-202ENST00000428704 U2AF1Q01081 240 aaKnown RBP eCLIP11.34□□□□□ -0.59
HDAC1-202ENST00000428704 NPM2Q86SE8 214 aaKnown RBP11.34□□□□□ -0.59
HDAC1-202ENST00000428704 VSIG10Q8N0Z9 540 aa11.34□□□□□ -0.59
HDAC1-202ENST00000428704 FBXO22Q8NEZ5 403 aa11.34□□□□□ -0.59
HDAC1-202ENST00000428704 IL17REQ8NFR9 667 aa11.34□□□□□ -0.59
HDAC1-202ENST00000428704 GAS2L2Q8NHY3 880 aa11.34□□□□□ -0.59
HDAC1-202ENST00000428704 RNF186Q9NXI6 227 aa11.34□□□□□ -0.59
HDAC1-202ENST00000428704 KDM3BQ7LBC6 1761 aa11.33□□□□□ -0.59
HDAC1-202ENST00000428704 GNAT3A8MTJ3 354 aa11.33□□□□□ -0.6
HDAC1-202ENST00000428704 KIF23Q02241 960 aaPredicted RBP11.33□□□□□ -0.6
HDAC1-202ENST00000428704 PKN2Q16513 984 aaKnown RBP11.33□□□□□ -0.6
HDAC1-202ENST00000428704 NBPF5PQ86XG9 351 aaPredicted RBP11.33□□□□□ -0.6
HDAC1-202ENST00000428704 LARGE2Q8N3Y3 721 aa11.33□□□□□ -0.6
HDAC1-202ENST00000428704 PSMD1Q99460 953 aa11.33□□□□□ -0.6
HDAC1-202ENST00000428704 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
HDAC1-202ENST00000428704 NUDCQ9Y266 331 aa11.33□□□□□ -0.6
HDAC1-202ENST00000428704 TRPM7Q96QT4 1865 aa11.32□□□□□ -0.6
HDAC1-202ENST00000428704 POTEFA5A3E0 1075 aa11.32□□□□□ -0.6
HDAC1-202ENST00000428704 PLCG2P16885 1265 aa11.32□□□□□ -0.6
HDAC1-202ENST00000428704 RGMBQ6NW40 437 aa11.32□□□□□ -0.6
HDAC1-202ENST00000428704 GPRC5DQ9NZD1 345 aa11.32□□□□□ -0.6
HDAC1-202ENST00000428704 HDAC9Q9UKV0 1011 aa11.32□□□□□ -0.6
HDAC1-202ENST00000428704 COLQQ9Y215 455 aaPredicted RBP11.32□□□□□ -0.6
HDAC1-202ENST00000428704 ARFGEF2Q9Y6D5 1785 aa11.31□□□□□ -0.6
HDAC1-202ENST00000428704 ALDH1B1P30837 517 aa11.31□□□□□ -0.6
HDAC1-202ENST00000428704 CDC37L1Q7L3B6 337 aa11.31□□□□□ -0.6
HDAC1-202ENST00000428704 PDCD7Q8N8D1 485 aaKnown RBP11.31□□□□□ -0.6
HDAC1-202ENST00000428704 CCDC102AQ96A19 550 aa11.31□□□□□ -0.6
HDAC1-202ENST00000428704 CACNA1SQ13698 1873 aa11.31□□□□□ -0.6
HDAC1-202ENST00000428704 LAMB4A4D0S4 1761 aa11.31□□□□□ -0.6
HDAC1-202ENST00000428704 SCN7AQ01118 1682 aa11.3□□□□□ -0.6
HDAC1-202ENST00000428704 FAM155AB1AL88 458 aaPredicted RBP11.3□□□□□ -0.6
HDAC1-202ENST00000428704 GTPBP6O43824 516 aaPredicted RBP11.3□□□□□ -0.6
HDAC1-202ENST00000428704 CAMTA2O94983 1202 aa11.3□□□□□ -0.6
HDAC1-202ENST00000428704 NIM1KQ8IY84 436 aa11.3□□□□□ -0.6
HDAC1-202ENST00000428704 TTC5Q8N0Z6 440 aa11.3□□□□□ -0.6
HDAC1-202ENST00000428704 MS4A4AQ96JQ5 239 aa11.3□□□□□ -0.6
HDAC1-202ENST00000428704 PLEKHF1Q96S99 279 aa11.3□□□□□ -0.6
HDAC1-202ENST00000428704 KLRG2A4D1S0 409 aaPredicted RBP11.29□□□□□ -0.6
HDAC1-202ENST00000428704 IL6STP40189 918 aaPredicted RBP11.29□□□□□ -0.6
HDAC1-202ENST00000428704 ZNF157P51786 506 aaPredicted RBP11.29□□□□□ -0.6
HDAC1-202ENST00000428704 SLC17A8Q8NDX2 589 aa11.29□□□□□ -0.6
HDAC1-202ENST00000428704 ZC3H15Q8WU90 426 aaKnown RBP11.29□□□□□ -0.6
HDAC1-202ENST00000428704 PGAP2Q9UHJ9 254 aa11.29□□□□□ -0.6
HDAC1-202ENST00000428704 COL4A5P29400 1685 aa11.29□□□□□ -0.6
HDAC1-202ENST00000428704 BCORQ6W2J9 1755 aa11.28□□□□□ -0.6
HDAC1-202ENST00000428704 TEFQ10587 303 aa11.28□□□□□ -0.6
HDAC1-202ENST00000428704 CC2D2BQ6DHV5 1058 aa11.28□□□□□ -0.6
HDAC1-202ENST00000428704 ZNF790Q6PG37 636 aa11.28□□□□□ -0.6
HDAC1-202ENST00000428704 TPTE2Q6XPS3 522 aa11.28□□□□□ -0.6
HDAC1-202ENST00000428704 MCM10Q7L590 875 aa11.28□□□□□ -0.6
HDAC1-202ENST00000428704 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
HDAC1-202ENST00000428704 ZNF496Q96IT1 587 aaPredicted RBP11.28□□□□□ -0.6
HDAC1-202ENST00000428704 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
HDAC1-202ENST00000428704 KCNQ3O43525 872 aa11.27□□□□□ -0.61
HDAC1-202ENST00000428704 GMPSP49915 693 aaPredicted RBP11.27□□□□□ -0.61
HDAC1-202ENST00000428704 DCTN1Q14203 1278 aa11.27□□□□□ -0.61
HDAC1-202ENST00000428704 USP48Q86UV5 1035 aa11.27□□□□□ -0.61
HDAC1-202ENST00000428704 C2orf69Q8N8R5 385 aa11.27□□□□□ -0.61
HDAC1-202ENST00000428704 SPRYD3Q8NCJ5 442 aa11.27□□□□□ -0.61
HDAC1-202ENST00000428704 CSRNP1Q96S65 589 aa11.27□□□□□ -0.61
HDAC1-202ENST00000428704 TEX13AQ9BXU3 409 aaPredicted RBP11.27□□□□□ -0.61
HDAC1-202ENST00000428704 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
HDAC1-202ENST00000428704 FAM177BA6PVY3 158 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms