RNA–Protein interactions for RNA: ENST00000428621.5

CLHC1-207, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 2

Gene CLHC1, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-207ENST00000428621 NUP188Q5SRE5 1749 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 PCDH11XQ9BZA7 1347 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 PCDH11YQ9BZA8 1340 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 GJB2P29033 226 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 MCM5P33992 734 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 KCNJ4P48050 445 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 CASP7P55210 303 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 ST3GAL1Q11201 340 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 KRT32Q14532 448 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 SIL1Q9H173 461 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
CLHC1-207ENST00000428621 DBNLQ9UJU6 430 aaKnown RBP9.62□□□□□ -0.87
CLHC1-207ENST00000428621 NOL7Q9UMY1 257 aaKnown RBP9.62□□□□□ -0.87
CLHC1-207ENST00000428621 MTMR6Q9Y217 621 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 USP16Q9Y5T5 823 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 TNS2Q63HR2 1409 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 TJP1Q07157 1748 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 KCPQ6ZWJ8 1503 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 CPA1P15085 419 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 PDCP20941 246 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 MSNP26038 577 aaKnown RBP9.62□□□□□ -0.87
CLHC1-207ENST00000428621 CABP4P57796 275 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 CCDC83Q8IWF9 413 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 BOLA2Q9H3K6 86 aa9.62□□□□□ -0.87
CLHC1-207ENST00000428621 WDR17Q8IZU2 1322 aa9.61□□□□□ -0.87
CLHC1-207ENST00000428621 GADD45BO75293 160 aaPredicted RBP9.61□□□□□ -0.87
CLHC1-207ENST00000428621 RPS6KB1P23443 525 aa9.61□□□□□ -0.87
CLHC1-207ENST00000428621 ME3Q16798 604 aa9.61□□□□□ -0.87
CLHC1-207ENST00000428621 BLOC1S2Q6QNY1 142 aa9.61□□□□□ -0.87
CLHC1-207ENST00000428621 UBE3BQ7Z3V4 1068 aa9.61□□□□□ -0.87
CLHC1-207ENST00000428621 KLHDC4Q8TBB5 520 aa9.61□□□□□ -0.87
CLHC1-207ENST00000428621 GDPD2Q9HCC8 539 aa9.61□□□□□ -0.87
CLHC1-207ENST00000428621 CNPY2Q9Y2B0 182 aa9.61□□□□□ -0.87
CLHC1-207ENST00000428621 PALLDQ8WX93 1383 aa9.61□□□□□ -0.87
CLHC1-207ENST00000428621 TAF5LO75529 589 aa9.6□□□□□ -0.87
CLHC1-207ENST00000428621 UVSSAQ2YD98 709 aa9.6□□□□□ -0.87
CLHC1-207ENST00000428621 PROM2Q8N271 834 aa9.6□□□□□ -0.87
CLHC1-207ENST00000428621 GPR108Q9NPR9 543 aa9.6□□□□□ -0.87
CLHC1-207ENST00000428621 TPCN1Q9ULQ1 816 aa9.6□□□□□ -0.87
CLHC1-207ENST00000428621 COL5A2P05997 1499 aaPredicted RBP9.6□□□□□ -0.87
CLHC1-207ENST00000428621 SPEF2Q9C093 1822 aa9.6□□□□□ -0.87
CLHC1-207ENST00000428621 ELP1O95163 1332 aa9.6□□□□□ -0.87
CLHC1-207ENST00000428621 A0A087WZG4 1122 aa9.6□□□□□ -0.87
CLHC1-207ENST00000428621 ERVV-2B6SEH9 535 aa9.6□□□□□ -0.87
CLHC1-207ENST00000428621 ZNF500O60304 480 aaPredicted RBP9.6□□□□□ -0.87
CLHC1-207ENST00000428621 ZNF589Q86UQ0 364 aaPredicted RBP9.6□□□□□ -0.87
CLHC1-207ENST00000428621 HAUS7Q99871 368 aa9.6□□□□□ -0.87
CLHC1-207ENST00000428621 CCDC39Q9UFE4 941 aa9.6□□□□□ -0.87
CLHC1-207ENST00000428621 SH3TC1Q8TE82 1336 aa9.6□□□□□ -0.87
CLHC1-207ENST00000428621 ZNF609O15014 1411 aa9.59□□□□□ -0.87
CLHC1-207ENST00000428621 H7C1W4 665 aa9.59□□□□□ -0.87
CLHC1-207ENST00000428621 TFCP2Q12800 502 aa9.59□□□□□ -0.87
CLHC1-207ENST00000428621 NKX1-1Q15270 411 aaPredicted RBP9.59□□□□□ -0.87
CLHC1-207ENST00000428621 CHRNA2Q15822 529 aa9.59□□□□□ -0.87
CLHC1-207ENST00000428621 CABLES1Q8TDN4 633 aa9.59□□□□□ -0.87
CLHC1-207ENST00000428621 DDX17Q92841 729 aaKnown RBP9.59□□□□□ -0.87
CLHC1-207ENST00000428621 NAP1L5Q96NT1 182 aaPredicted RBP9.59□□□□□ -0.87
CLHC1-207ENST00000428621 ZKSCAN5Q9Y2L8 839 aa9.59□□□□□ -0.87
CLHC1-207ENST00000428621 ABCA3Q99758 1704 aa9.59□□□□□ -0.87
CLHC1-207ENST00000428621 SPDYE2BA6NHP3 402 aa9.59□□□□□ -0.87
CLHC1-207ENST00000428621 SPDYE6P0CI01 402 aa9.59□□□□□ -0.87
CLHC1-207ENST00000428621 SPDYE2Q495Y8 402 aa9.59□□□□□ -0.87
CLHC1-207ENST00000428621 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.59□□□□□ -0.87
CLHC1-207ENST00000428621 SHANK3Q9BYB0 1731 aa9.58□□□□□ -0.88
CLHC1-207ENST00000428621 XIRP1Q702N8 1843 aaKnown RBP9.58□□□□□ -0.88
CLHC1-207ENST00000428621 FIBPO43427 364 aa9.58□□□□□ -0.88
CLHC1-207ENST00000428621 OFD1O75665 1012 aa9.58□□□□□ -0.88
CLHC1-207ENST00000428621 TERF1P54274 439 aa9.58□□□□□ -0.88
CLHC1-207ENST00000428621 TOB2Q14106 344 aaPredicted RBP9.58□□□□□ -0.88
CLHC1-207ENST00000428621 FOXD4L6Q3SYB3 417 aaPredicted RBP9.58□□□□□ -0.88
CLHC1-207ENST00000428621 FOXD4L3Q6VB84 417 aaPredicted RBP9.58□□□□□ -0.88
CLHC1-207ENST00000428621 KBTBD3Q8NAB2 608 aa9.58□□□□□ -0.88
CLHC1-207ENST00000428621 LARP6Q9BRS8 491 aaKnown RBP9.58□□□□□ -0.88
CLHC1-207ENST00000428621 ATG3Q9NT62 314 aa9.58□□□□□ -0.88
CLHC1-207ENST00000428621 CWC25Q9NXE8 425 aaPredicted RBP9.58□□□□□ -0.88
CLHC1-207ENST00000428621 VPS37CA5D8V6 355 aaPredicted RBP9.57□□□□□ -0.88
CLHC1-207ENST00000428621 NBPF26B4DH59 902 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 KRT85P78386 507 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 FOXO4P98177 505 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 DNM1Q05193 864 aaKnown RBP9.57□□□□□ -0.88
CLHC1-207ENST00000428621 NBPF14Q5TI25 921 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 NBPF10Q6P3W6 841 aaKnown RBP9.57□□□□□ -0.88
CLHC1-207ENST00000428621 NBPF15Q8N660 670 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 CCDC191Q8NCU4 936 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 RNF214Q8ND24 703 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 DBNDD2Q9BQY9 259 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.57□□□□□ -0.88
CLHC1-207ENST00000428621 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 PTCD1O75127 700 aaKnown RBP9.57□□□□□ -0.88
CLHC1-207ENST00000428621 CIAO1O76071 339 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 TPM2P07951 284 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 HMGB1P09429 215 aaKnown RBP9.57□□□□□ -0.88
CLHC1-207ENST00000428621 IL15P40933 162 aaPredicted RBP9.57□□□□□ -0.88
CLHC1-207ENST00000428621 MCMDC2Q4G0Z9 681 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 LARP1BQ659C4 914 aaKnown RBP9.57□□□□□ -0.88
CLHC1-207ENST00000428621 LMBR1LQ6UX01 489 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 BRINP3Q76B58 766 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 NECAB1Q8N987 351 aa9.57□□□□□ -0.88
CLHC1-207ENST00000428621 ZCRB1Q8TBF4 217 aaKnown RBP9.57□□□□□ -0.88
CLHC1-207ENST00000428621 GTF3C6Q969F1 213 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms