RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 CWF19L2Q2TBE0 894 aaKnown RBP12.13□□□□□ -0.47
TRIM39-208ENST00000428555 DPP8Q6V1X1 898 aaPredicted RBP12.13□□□□□ -0.47
TRIM39-208ENST00000428555 CCDC85AQ96PX6 553 aaPredicted RBP12.13□□□□□ -0.47
TRIM39-208ENST00000428555 RTFDC1Q9BY42 306 aaPredicted RBP12.13□□□□□ -0.47
TRIM39-208ENST00000428555 SEC31BQ9NQW1 1179 aa12.13□□□□□ -0.47
TRIM39-208ENST00000428555 ZNF521Q96K83 1311 aa12.12□□□□□ -0.47
TRIM39-208ENST00000428555 NEURL1BA8MQ27 555 aa12.12□□□□□ -0.47
TRIM39-208ENST00000428555 PPIP5K2O43314 1243 aa12.12□□□□□ -0.47
TRIM39-208ENST00000428555 PDE8AO60658 829 aa12.12□□□□□ -0.47
TRIM39-208ENST00000428555 HSP90B1P14625 803 aaKnown RBP12.12□□□□□ -0.47
TRIM39-208ENST00000428555 EIF6P56537 245 aaKnown RBP12.12□□□□□ -0.47
TRIM39-208ENST00000428555 FKBP5Q13451 457 aaPredicted RBP12.12□□□□□ -0.47
TRIM39-208ENST00000428555 AOC3Q16853 763 aa12.12□□□□□ -0.47
TRIM39-208ENST00000428555 SMC1BQ8NDV3 1235 aa12.12□□□□□ -0.47
TRIM39-208ENST00000428555 GJA3Q9Y6H8 435 aa12.12□□□□□ -0.47
TRIM39-208ENST00000428555 FER1L6Q2WGJ9 1857 aa12.12□□□□□ -0.47
TRIM39-208ENST00000428555 H7C1W4 665 aa12.11□□□□□ -0.47
TRIM39-208ENST00000428555 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
TRIM39-208ENST00000428555 POTEJP0CG39 1038 aa12.11□□□□□ -0.47
TRIM39-208ENST00000428555 APLP1P51693 650 aa12.11□□□□□ -0.47
TRIM39-208ENST00000428555 TMC4Q7Z404 712 aa12.11□□□□□ -0.47
TRIM39-208ENST00000428555 SUPT20HQ8NEM7 779 aa12.11□□□□□ -0.47
TRIM39-208ENST00000428555 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
TRIM39-208ENST00000428555 VPS33BQ9H267 617 aa12.11□□□□□ -0.47
TRIM39-208ENST00000428555 NSFL1CQ9UNZ2 370 aaKnown RBP12.11□□□□□ -0.47
TRIM39-208ENST00000428555 IQCA1LA6NCM1 817 aa12.1□□□□□ -0.47
TRIM39-208ENST00000428555 F6X3S4 739 aa12.1□□□□□ -0.47
TRIM39-208ENST00000428555 CCER2I3L3R5 266 aa12.1□□□□□ -0.47
TRIM39-208ENST00000428555 HTRA3P83110 453 aa12.1□□□□□ -0.47
TRIM39-208ENST00000428555 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
TRIM39-208ENST00000428555 NIM1KQ8IY84 436 aa12.1□□□□□ -0.47
TRIM39-208ENST00000428555 GPC2Q8N158 579 aa12.1□□□□□ -0.47
TRIM39-208ENST00000428555 DNAAF4Q8WXU2 420 aa12.1□□□□□ -0.47
TRIM39-208ENST00000428555 TAF1DQ9H5J8 278 aaPredicted RBP12.1□□□□□ -0.47
TRIM39-208ENST00000428555 GPSM2P81274 684 aa12.09□□□□□ -0.47
TRIM39-208ENST00000428555 CXCL9Q07325 125 aa12.09□□□□□ -0.47
TRIM39-208ENST00000428555 KIAA2012Q0VF49 1180 aa12.09□□□□□ -0.47
TRIM39-208ENST00000428555 GCKRQ14397 625 aa12.09□□□□□ -0.47
TRIM39-208ENST00000428555 UBE3BQ7Z3V4 1068 aa12.09□□□□□ -0.47
TRIM39-208ENST00000428555 DNAJC5GQ8N7S2 189 aa12.09□□□□□ -0.47
TRIM39-208ENST00000428555 TTLL11Q8NHH1 800 aa12.09□□□□□ -0.47
TRIM39-208ENST00000428555 DAXXQ9UER7 740 aaPredicted RBP12.09□□□□□ -0.47
TRIM39-208ENST00000428555 POLLQ9UGP5 575 aa12.09□□□□□ -0.47
TRIM39-208ENST00000428555 HACL1Q9UJ83 578 aa12.09□□□□□ -0.47
TRIM39-208ENST00000428555 ZNRF3Q9ULT6 936 aa12.09□□□□□ -0.47
TRIM39-208ENST00000428555 CDHR2Q9BYE9 1310 aa12.09□□□□□ -0.47
TRIM39-208ENST00000428555 E9PSI1 815 aa12.08□□□□□ -0.48
TRIM39-208ENST00000428555 C6orf229H3BNL8 230 aa12.08□□□□□ -0.48
TRIM39-208ENST00000428555 RIMBP2O15034 1052 aa12.08□□□□□ -0.48
TRIM39-208ENST00000428555 EPHX2P34913 555 aa12.08□□□□□ -0.48
TRIM39-208ENST00000428555 SLFN5Q08AF3 891 aa12.08□□□□□ -0.48
TRIM39-208ENST00000428555 WASHC4Q2M389 1173 aa12.08□□□□□ -0.48
TRIM39-208ENST00000428555 EAPPQ56P03 285 aaPredicted RBP12.08□□□□□ -0.48
TRIM39-208ENST00000428555 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
TRIM39-208ENST00000428555 LINS1Q8NG48 757 aa12.08□□□□□ -0.48
TRIM39-208ENST00000428555 CDCA7LQ96GN5 454 aa12.08□□□□□ -0.48
TRIM39-208ENST00000428555 CLEC11AQ9Y240 323 aa12.08□□□□□ -0.48
TRIM39-208ENST00000428555 CCDC88AQ3V6T2 1871 aa12.08□□□□□ -0.48
TRIM39-208ENST00000428555 COL4A5P29400 1685 aa12.07□□□□□ -0.48
TRIM39-208ENST00000428555 RAD17O75943 681 aa12.07□□□□□ -0.48
TRIM39-208ENST00000428555 EPS15P42566 896 aa12.07□□□□□ -0.48
TRIM39-208ENST00000428555 CASP7P55210 303 aa12.07□□□□□ -0.48
TRIM39-208ENST00000428555 CTSWP56202 376 aa12.07□□□□□ -0.48
TRIM39-208ENST00000428555 CACNA1SQ13698 1873 aa12.07□□□□□ -0.48
TRIM39-208ENST00000428555 BEND3Q5T5X7 828 aa12.07□□□□□ -0.48
TRIM39-208ENST00000428555 TBC1D16Q8TBP0 767 aa12.07□□□□□ -0.48
TRIM39-208ENST00000428555 GPR101Q96P66 508 aaPredicted RBP12.07□□□□□ -0.48
TRIM39-208ENST00000428555 GREM2Q9H772 168 aa12.07□□□□□ -0.48
TRIM39-208ENST00000428555 ARFGEF2Q9Y6D5 1785 aa12.07□□□□□ -0.48
TRIM39-208ENST00000428555 DOK7Q18PE1 504 aa12.06□□□□□ -0.48
TRIM39-208ENST00000428555 LDHDQ86WU2 507 aa12.06□□□□□ -0.48
TRIM39-208ENST00000428555 ANKRD18AQ8IVF6 992 aa12.06□□□□□ -0.48
TRIM39-208ENST00000428555 ANKIB1Q9P2G1 1089 aa12.06□□□□□ -0.48
TRIM39-208ENST00000428555 ANKRD36CQ5JPF3 1778 aa12.05□□□□□ -0.48
TRIM39-208ENST00000428555 YDJCA8MPS7 323 aa12.05□□□□□ -0.48
TRIM39-208ENST00000428555 SCNN1DP51172 638 aa12.05□□□□□ -0.48
TRIM39-208ENST00000428555 CIAPIN1Q6FI81 312 aa12.05□□□□□ -0.48
TRIM39-208ENST00000428555 PNMA8AQ86V59 439 aaPredicted RBP12.05□□□□□ -0.48
TRIM39-208ENST00000428555 MIER1Q8N108 512 aa12.05□□□□□ -0.48
TRIM39-208ENST00000428555 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
TRIM39-208ENST00000428555 PLA2G12BQ9BX93 195 aa12.05□□□□□ -0.48
TRIM39-208ENST00000428555 ZC3H12CQ9C0D7 883 aaKnown RBP12.05□□□□□ -0.48
TRIM39-208ENST00000428555 DBNDD1Q9H9R9 158 aa12.05□□□□□ -0.48
TRIM39-208ENST00000428555 KCNQ5Q9NR82 932 aa12.05□□□□□ -0.48
TRIM39-208ENST00000428555 PODXL2Q9NZ53 605 aa12.05□□□□□ -0.48
TRIM39-208ENST00000428555 WDR90Q96KV7 1748 aa12.05□□□□□ -0.48
TRIM39-208ENST00000428555 DICER1Q9UPY3 1922 aaKnown RBP12.04□□□□□ -0.48
TRIM39-208ENST00000428555 WTIPA6NIX2 430 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-208ENST00000428555 UFL1O94874 794 aa12.04□□□□□ -0.48
TRIM39-208ENST00000428555 CSF1RP07333 972 aa12.04□□□□□ -0.48
TRIM39-208ENST00000428555 LMOD1P29536 600 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-208ENST00000428555 GMPSP49915 693 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-208ENST00000428555 TNIP1Q15025 636 aa12.04□□□□□ -0.48
TRIM39-208ENST00000428555 DIEXFQ68CQ4 756 aaKnown RBP12.04□□□□□ -0.48
TRIM39-208ENST00000428555 SLC4A10Q6U841 1118 aa12.04□□□□□ -0.48
TRIM39-208ENST00000428555 TRMT2AQ8IZ69 625 aaKnown RBP12.04□□□□□ -0.48
TRIM39-208ENST00000428555 SSH1Q8WYL5 1049 aa12.04□□□□□ -0.48
TRIM39-208ENST00000428555 CDC5LQ99459 802 aaKnown RBP12.04□□□□□ -0.48
TRIM39-208ENST00000428555 EYA3Q99504 573 aa12.04□□□□□ -0.48
TRIM39-208ENST00000428555 BSDC1Q9NW68 430 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms