RNA–Protein interactions for RNA: ENST00000428020.5

TMEM40-203, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM40, Length 431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-203ENST00000428020 SSH3Q8TE77 659 aa12.74□□□□□ -0.37
TMEM40-203ENST00000428020 CCDC85AQ96PX6 553 aaPredicted RBP12.74□□□□□ -0.37
TMEM40-203ENST00000428020 PDGFDQ9GZP0 370 aaPredicted RBP12.74□□□□□ -0.37
TMEM40-203ENST00000428020 MYH3P11055 1940 aa12.74□□□□□ -0.37
TMEM40-203ENST00000428020 ABCC12Q96J65 1359 aa12.73□□□□□ -0.37
TMEM40-203ENST00000428020 CSF1RP07333 972 aa12.73□□□□□ -0.37
TMEM40-203ENST00000428020 POLD1P28340 1107 aa12.73□□□□□ -0.37
TMEM40-203ENST00000428020 IFIT5Q13325 482 aaKnown RBP12.73□□□□□ -0.37
TMEM40-203ENST00000428020 OS9Q13438 667 aaPredicted RBP12.73□□□□□ -0.37
TMEM40-203ENST00000428020 POLA2Q14181 598 aa12.73□□□□□ -0.37
TMEM40-203ENST00000428020 TTLL11Q8NHH1 800 aa12.73□□□□□ -0.37
TMEM40-203ENST00000428020 GCC1Q96CN9 775 aa12.73□□□□□ -0.37
TMEM40-203ENST00000428020 SPON1Q9HCB6 807 aa12.73□□□□□ -0.37
TMEM40-203ENST00000428020 LAMB2P55268 1798 aa12.73□□□□□ -0.37
TMEM40-203ENST00000428020 DDX60Q8IY21 1712 aaKnown RBP12.72□□□□□ -0.37
TMEM40-203ENST00000428020 ANKRD18BA2A2Z9 1011 aa12.72□□□□□ -0.37
TMEM40-203ENST00000428020 SURF6O75683 361 aaKnown RBP12.72□□□□□ -0.37
TMEM40-203ENST00000428020 ZBTB7AO95365 584 aa12.72□□□□□ -0.37
TMEM40-203ENST00000428020 G3BP1Q13283 466 aaKnown RBP eCLIP12.72□□□□□ -0.37
TMEM40-203ENST00000428020 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
TMEM40-203ENST00000428020 HSP90AB4PQ58FF6 505 aa12.72□□□□□ -0.37
TMEM40-203ENST00000428020 MTFR1LQ9H019 292 aa12.72□□□□□ -0.37
TMEM40-203ENST00000428020 SF3B3Q15393 1217 aaKnown RBP12.71□□□□□ -0.37
TMEM40-203ENST00000428020 GREM2Q9H772 168 aa12.71□□□□□ -0.37
TMEM40-203ENST00000428020 DCTPP1Q9H773 170 aa12.71□□□□□ -0.37
TMEM40-203ENST00000428020 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
TMEM40-203ENST00000428020 KDM2BQ8NHM5 1336 aa12.7□□□□□ -0.38
TMEM40-203ENST00000428020 APBB1O00213 710 aa12.7□□□□□ -0.38
TMEM40-203ENST00000428020 ITGA6P23229 1130 aa12.7□□□□□ -0.38
TMEM40-203ENST00000428020 PDE6BP35913 854 aa12.7□□□□□ -0.38
TMEM40-203ENST00000428020 DDX46Q7L014 1031 aaKnown RBP12.7□□□□□ -0.38
TMEM40-203ENST00000428020 RPGRQ92834 1020 aaKnown RBP12.7□□□□□ -0.38
TMEM40-203ENST00000428020 BRIP1Q9BX63 1249 aa12.7□□□□□ -0.38
TMEM40-203ENST00000428020 EXOC6BQ9Y2D4 811 aa12.7□□□□□ -0.38
TMEM40-203ENST00000428020 CASZ1Q86V15 1759 aa12.7□□□□□ -0.38
TMEM40-203ENST00000428020 RIC1Q4ADV7 1423 aa12.7□□□□□ -0.38
TMEM40-203ENST00000428020 RAB11FIP3O75154 756 aa12.69□□□□□ -0.38
TMEM40-203ENST00000428020 IGHMBP2P38935 993 aaKnown RBP12.69□□□□□ -0.38
TMEM40-203ENST00000428020 RFX5P48382 616 aaPredicted RBP12.69□□□□□ -0.38
TMEM40-203ENST00000428020 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
TMEM40-203ENST00000428020 ERC1Q8IUD2 1116 aa12.69□□□□□ -0.38
TMEM40-203ENST00000428020 SMC5Q8IY18 1101 aa12.69□□□□□ -0.38
TMEM40-203ENST00000428020 CDC5LQ99459 802 aaKnown RBP12.69□□□□□ -0.38
TMEM40-203ENST00000428020 SIL1Q9H173 461 aa12.69□□□□□ -0.38
TMEM40-203ENST00000428020 COPRSQ9NQ92 184 aa12.69□□□□□ -0.38
TMEM40-203ENST00000428020 PA2G4Q9UQ80 394 aaKnown RBP12.69□□□□□ -0.38
TMEM40-203ENST00000428020 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
TMEM40-203ENST00000428020 NRXN2Q9P2S2 1712 aa12.68□□□□□ -0.38
TMEM40-203ENST00000428020 PTPN12Q05209 780 aaKnown RBP12.68□□□□□ -0.38
TMEM40-203ENST00000428020 C3orf67Q6ZVT6 689 aa12.68□□□□□ -0.38
TMEM40-203ENST00000428020 ANKRD18AQ8IVF6 992 aa12.68□□□□□ -0.38
TMEM40-203ENST00000428020 KLHDC4Q8TBB5 520 aa12.68□□□□□ -0.38
TMEM40-203ENST00000428020 RBM17Q96I25 401 aaKnown RBP12.68□□□□□ -0.38
TMEM40-203ENST00000428020 ZNF594Q96JF6 807 aaPredicted RBP12.68□□□□□ -0.38
TMEM40-203ENST00000428020 MPHOSPH8Q99549 860 aa12.68□□□□□ -0.38
TMEM40-203ENST00000428020 BCL11AQ9H165 835 aa12.68□□□□□ -0.38
TMEM40-203ENST00000428020 CNNM1Q9NRU3 951 aa12.68□□□□□ -0.38
TMEM40-203ENST00000428020 NOP58Q9Y2X3 529 aaKnown RBP12.68□□□□□ -0.38
TMEM40-203ENST00000428020 LDHAL6AQ6ZMR3 332 aa12.67□□□□□ -0.38
TMEM40-203ENST00000428020 KIF1BPQ96EK5 621 aa12.67□□□□□ -0.38
TMEM40-203ENST00000428020 LRRCC1Q9C099 1032 aa12.67□□□□□ -0.38
TMEM40-203ENST00000428020 SEC31BQ9NQW1 1179 aa12.67□□□□□ -0.38
TMEM40-203ENST00000428020 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
TMEM40-203ENST00000428020 TNRC6CQ9HCJ0 1690 aaKnown RBP12.67□□□□□ -0.38
TMEM40-203ENST00000428020 H0YIN7 160 aa12.66□□□□□ -0.38
TMEM40-203ENST00000428020 EYA2O00167 538 aa12.66□□□□□ -0.38
TMEM40-203ENST00000428020 CIAO1O76071 339 aa12.66□□□□□ -0.38
TMEM40-203ENST00000428020 IL15P40933 162 aaPredicted RBP12.66□□□□□ -0.38
TMEM40-203ENST00000428020 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
TMEM40-203ENST00000428020 NUCB1Q02818 461 aa12.65□□□□□ -0.38
TMEM40-203ENST00000428020 GRAPQ13588 217 aa12.65□□□□□ -0.38
TMEM40-203ENST00000428020 CRY2Q49AN0 593 aa12.65□□□□□ -0.38
TMEM40-203ENST00000428020 CHD1LQ86WJ1 897 aa12.65□□□□□ -0.38
TMEM40-203ENST00000428020 C2CD5Q86YS7 1000 aa12.65□□□□□ -0.38
TMEM40-203ENST00000428020 GRAPLQ8TC17 118 aaPredicted RBP12.65□□□□□ -0.38
TMEM40-203ENST00000428020 RHPN1Q8TCX5 695 aa12.65□□□□□ -0.38
TMEM40-203ENST00000428020 ANKRD31Q8N7Z5 1873 aa12.64□□□□□ -0.39
TMEM40-203ENST00000428020 KLRG2A4D1S0 409 aaPredicted RBP12.64□□□□□ -0.39
TMEM40-203ENST00000428020 NPR1P16066 1061 aa12.64□□□□□ -0.39
TMEM40-203ENST00000428020 RPS8P62241 208 aaKnown RBP12.64□□□□□ -0.39
TMEM40-203ENST00000428020 LRRC24Q50LG9 513 aa12.64□□□□□ -0.39
TMEM40-203ENST00000428020 METTL24Q5JXM2 366 aa12.64□□□□□ -0.39
TMEM40-203ENST00000428020 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
TMEM40-203ENST00000428020 CLASRPQ8N2M8 674 aaKnown RBP12.64□□□□□ -0.39
TMEM40-203ENST00000428020 ZNF622Q969S3 477 aaKnown RBP eCLIP12.64□□□□□ -0.39
TMEM40-203ENST00000428020 MASTLQ96GX5 879 aa12.64□□□□□ -0.39
TMEM40-203ENST00000428020 PUS3Q9BZE2 481 aaKnown RBP12.64□□□□□ -0.39
TMEM40-203ENST00000428020 LNPKQ9C0E8 428 aa12.64□□□□□ -0.39
TMEM40-203ENST00000428020 IL1RAPL2Q9NP60 686 aa12.64□□□□□ -0.39
TMEM40-203ENST00000428020 CEP126Q9P2H0 1117 aa12.64□□□□□ -0.39
TMEM40-203ENST00000428020 MROH5Q6ZUA9 1318 aa12.63□□□□□ -0.39
TMEM40-203ENST00000428020 SMARCA5O60264 1052 aaPredicted RBP12.63□□□□□ -0.39
TMEM40-203ENST00000428020 SRGNP10124 158 aa12.63□□□□□ -0.39
TMEM40-203ENST00000428020 ALDH1B1P30837 517 aa12.63□□□□□ -0.39
TMEM40-203ENST00000428020 HOXA10P31260 410 aaPredicted RBP12.63□□□□□ -0.39
TMEM40-203ENST00000428020 CELF1Q92879 486 aaKnown RBP12.63□□□□□ -0.39
TMEM40-203ENST00000428020 CRAMP1Q96RY5 1269 aa12.63□□□□□ -0.39
TMEM40-203ENST00000428020 TMX4Q9H1E5 349 aaPredicted RBP12.63□□□□□ -0.39
TMEM40-203ENST00000428020 BSDC1Q9NW68 430 aaPredicted RBP12.63□□□□□ -0.39
TMEM40-203ENST00000428020 C10orf71Q711Q0 1435 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms