RNA–Protein interactions for RNA: ENST00000428007.1

PAICSP3-201, Transcript of phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 3, humanhuman

BASIC

Gene PAICSP3, Length 1,168 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAICSP3-201ENST00000428007 ZBTB38Q8NAP3 1195 aaPredicted RBP11.31□□□□□ -0.6
PAICSP3-201ENST00000428007 ARHGAP45Q92619 1136 aa11.31□□□□□ -0.6
PAICSP3-201ENST00000428007 CWC25Q9NXE8 425 aaPredicted RBP11.31□□□□□ -0.6
PAICSP3-201ENST00000428007 TRMT112Q9UI30 125 aaKnown RBP11.31□□□□□ -0.6
PAICSP3-201ENST00000428007 NRXN2Q9P2S2 1712 aa11.31□□□□□ -0.6
PAICSP3-201ENST00000428007 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
PAICSP3-201ENST00000428007 DPEP1P16444 411 aa11.3□□□□□ -0.6
PAICSP3-201ENST00000428007 HOXA10P31260 410 aaPredicted RBP11.3□□□□□ -0.6
PAICSP3-201ENST00000428007 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
PAICSP3-201ENST00000428007 SUSD4Q5VX71 490 aa11.3□□□□□ -0.6
PAICSP3-201ENST00000428007 LINS1Q8NG48 757 aa11.3□□□□□ -0.6
PAICSP3-201ENST00000428007 DNAAF4Q8WXU2 420 aa11.3□□□□□ -0.6
PAICSP3-201ENST00000428007 RBM17Q96I25 401 aaKnown RBP11.3□□□□□ -0.6
PAICSP3-201ENST00000428007 CRAMP1Q96RY5 1269 aa11.3□□□□□ -0.6
PAICSP3-201ENST00000428007 CRISPLD2Q9H0B8 497 aa11.3□□□□□ -0.6
PAICSP3-201ENST00000428007 BCORQ6W2J9 1755 aa11.3□□□□□ -0.6
PAICSP3-201ENST00000428007 PXDNLA1KZ92 1463 aa11.3□□□□□ -0.6
PAICSP3-201ENST00000428007 A0A0G2JLW4 131 aa11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 PI4KAP2A4QPH2 592 aa11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 BBOX1O75936 387 aa11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 NTSR2O95665 410 aa11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 PCCAP05165 728 aaPredicted RBP11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 PDE4AP27815 886 aa11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 MFSD10Q14728 455 aa11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 PI4KAP1Q8N8J0 262 aa11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 NLGN2Q8NFZ4 835 aa11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 RPGRQ92834 1020 aaKnown RBP11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 VPS33BQ9H267 617 aa11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 PHAXQ9H814 394 aaKnown RBP11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 KIF16BQ96L93 1317 aa11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 ZC3H4Q9UPT8 1303 aaKnown RBP11.29□□□□□ -0.6
PAICSP3-201ENST00000428007 TTLL13PA6NNM8 815 aa11.28□□□□□ -0.6
PAICSP3-201ENST00000428007 ALDH1L1O75891 902 aa11.28□□□□□ -0.6
PAICSP3-201ENST00000428007 ANXA1P04083 346 aa11.28□□□□□ -0.6
PAICSP3-201ENST00000428007 KCNA3P22001 575 aa11.28□□□□□ -0.6
PAICSP3-201ENST00000428007 RTKN2Q8IZC4 609 aa11.28□□□□□ -0.6
PAICSP3-201ENST00000428007 BCS1LQ9Y276 419 aa11.28□□□□□ -0.6
PAICSP3-201ENST00000428007 MAP3K2Q9Y2U5 619 aa11.28□□□□□ -0.6
PAICSP3-201ENST00000428007 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
PAICSP3-201ENST00000428007 TESPA1A2RU30 521 aaPredicted RBP11.27□□□□□ -0.61
PAICSP3-201ENST00000428007 MS4A1P11836 297 aa11.27□□□□□ -0.61
PAICSP3-201ENST00000428007 GPTP24298 496 aa11.27□□□□□ -0.61
PAICSP3-201ENST00000428007 SF3B3Q15393 1217 aaKnown RBP11.27□□□□□ -0.61
PAICSP3-201ENST00000428007 DDX46Q7L014 1031 aaKnown RBP11.27□□□□□ -0.61
PAICSP3-201ENST00000428007 ZNF622Q969S3 477 aaKnown RBP eCLIP11.27□□□□□ -0.61
PAICSP3-201ENST00000428007 DDX27Q96GQ7 796 aaKnown RBP11.27□□□□□ -0.61
PAICSP3-201ENST00000428007 API5Q9BZZ5 524 aaKnown RBP11.27□□□□□ -0.61
PAICSP3-201ENST00000428007 UBN2Q6ZU65 1347 aa11.27□□□□□ -0.61
PAICSP3-201ENST00000428007 PDE8AO60658 829 aa11.26□□□□□ -0.61
PAICSP3-201ENST00000428007 CCDC152Q4G0S7 254 aa11.26□□□□□ -0.61
PAICSP3-201ENST00000428007 PELP1Q8IZL8 1130 aaKnown RBP11.26□□□□□ -0.61
PAICSP3-201ENST00000428007 MYD88Q99836 296 aa11.26□□□□□ -0.61
PAICSP3-201ENST00000428007 LTBP3Q9NS15 1303 aa11.26□□□□□ -0.61
PAICSP3-201ENST00000428007 IRS4O14654 1257 aaPredicted RBP11.25□□□□□ -0.61
PAICSP3-201ENST00000428007 CCT4P50991 539 aaKnown RBP11.25□□□□□ -0.61
PAICSP3-201ENST00000428007 ERFEQ4G0M1 354 aa11.25□□□□□ -0.61
PAICSP3-201ENST00000428007 MRPL50Q8N5N7 158 aaKnown RBP11.25□□□□□ -0.61
PAICSP3-201ENST00000428007 SUPT20HQ8NEM7 779 aa11.25□□□□□ -0.61
PAICSP3-201ENST00000428007 ZC3H15Q8WU90 426 aaKnown RBP11.25□□□□□ -0.61
PAICSP3-201ENST00000428007 PLA2G12BQ9BX93 195 aa11.25□□□□□ -0.61
PAICSP3-201ENST00000428007 SRCIN1Q9C0H9 1055 aa11.25□□□□□ -0.61
PAICSP3-201ENST00000428007 BMP2KQ9NSY1 1161 aaPredicted RBP11.25□□□□□ -0.61
PAICSP3-201ENST00000428007 SMC4Q9NTJ3 1288 aa11.25□□□□□ -0.61
PAICSP3-201ENST00000428007 NUP98P52948 1817 aa11.25□□□□□ -0.61
PAICSP3-201ENST00000428007 NEURL1BA8MQ27 555 aa11.24□□□□□ -0.61
PAICSP3-201ENST00000428007 GALR2O43603 387 aaPredicted RBP11.24□□□□□ -0.61
PAICSP3-201ENST00000428007 GCKRQ14397 625 aa11.24□□□□□ -0.61
PAICSP3-201ENST00000428007 CCDC93Q567U6 631 aa11.24□□□□□ -0.61
PAICSP3-201ENST00000428007 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
PAICSP3-201ENST00000428007 CHMP4BQ9H444 224 aaKnown RBP11.24□□□□□ -0.61
PAICSP3-201ENST00000428007 FAM177BA6PVY3 158 aa11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 ATP5J2-PTCD1G3V325 749 aa11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 H7C1W4 665 aa11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 YBX3P16989 372 aaKnown RBP eCLIP11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 CHRNA5P30532 468 aa11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 TIE1P35590 1138 aa11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 RARSP54136 660 aaKnown RBP11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 BEND3Q5T5X7 828 aa11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 PRPF40BQ6NWY9 871 aaKnown RBP11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 ARHGAP27Q6ZUM4 889 aa11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 NUTM1Q86Y26 1132 aa11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 CDC5LQ99459 802 aaKnown RBP11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 ADCY9O60503 1353 aa11.23□□□□□ -0.61
PAICSP3-201ENST00000428007 TULP1O00294 542 aaPredicted RBP11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 IGKV5-2P06315 115 aa11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 LMNB1P20700 586 aa11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 YY1P25490 414 aa11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 AFDNP55196 1824 aaKnown RBP11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 GRAPQ13588 217 aa11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 SP8Q8IXZ3 490 aa11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 RTL9Q8NET4 1388 aa11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 GRAPLQ8TC17 118 aaPredicted RBP11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 FAM89AQ96GI7 184 aa11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 PSMD1Q99460 953 aa11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 C9orf78Q9NZ63 289 aaPredicted RBP11.22□□□□□ -0.61
PAICSP3-201ENST00000428007 G2E3Q7L622 706 aa11.21□□□□□ -0.61
PAICSP3-201ENST00000428007 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.21□□□□□ -0.61
PAICSP3-201ENST00000428007 C7orf43Q8WVR3 580 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms