RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 G2E3Q7L622 706 aa26.41■■□□□ 1.82
HSPG2-205ENST00000427897 MPNDQ8N594 471 aa26.41■■□□□ 1.82
HSPG2-205ENST00000427897 DDX60Q8IY21 1712 aaKnown RBP26.4■■□□□ 1.82
HSPG2-205ENST00000427897 FLIIQ13045 1269 aa26.4■■□□□ 1.82
HSPG2-205ENST00000427897 SMC1BQ8NDV3 1235 aa26.4■■□□□ 1.82
HSPG2-205ENST00000427897 JARID2Q92833 1246 aaPredicted RBP26.4■■□□□ 1.82
HSPG2-205ENST00000427897 SPINK5Q9NQ38 1064 aaPredicted RBP26.4■■□□□ 1.82
HSPG2-205ENST00000427897 PPIP5K2O43314 1243 aa26.39■■□□□ 1.82
HSPG2-205ENST00000427897 PDE8AO60658 829 aa26.39■■□□□ 1.82
HSPG2-205ENST00000427897 NIM1KQ8IY84 436 aa26.39■■□□□ 1.82
HSPG2-205ENST00000427897 IQCA1LA6NCM1 817 aa26.38■■□□□ 1.81
HSPG2-205ENST00000427897 CCER2I3L3R5 266 aa26.38■■□□□ 1.81
HSPG2-205ENST00000427897 CCDC152Q4G0S7 254 aa26.37■■□□□ 1.81
HSPG2-205ENST00000427897 VPS33BQ9H267 617 aa26.37■■□□□ 1.81
HSPG2-205ENST00000427897 WDR90Q96KV7 1748 aa26.36■■□□□ 1.81
HSPG2-205ENST00000427897 GJA3Q9Y6H8 435 aa26.36■■□□□ 1.81
HSPG2-205ENST00000427897 FZD9O00144 591 aa26.35■■□□□ 1.81
HSPG2-205ENST00000427897 IGKV5-2P06315 115 aa26.35■■□□□ 1.81
HSPG2-205ENST00000427897 APLP1P51693 650 aa26.35■■□□□ 1.81
HSPG2-205ENST00000427897 AOC3Q16853 763 aa26.35■■□□□ 1.81
HSPG2-205ENST00000427897 CWF19L2Q2TBE0 894 aaKnown RBP26.35■■□□□ 1.81
HSPG2-205ENST00000427897 DNAAF4Q8WXU2 420 aa26.35■■□□□ 1.81
HSPG2-205ENST00000427897 CELF1Q92879 486 aaKnown RBP26.35■■□□□ 1.81
HSPG2-205ENST00000427897 ZNF541Q9H0D2 1346 aa26.35■■□□□ 1.81
HSPG2-205ENST00000427897 CACNA1FO60840 1977 aa26.35■■□□□ 1.81
HSPG2-205ENST00000427897 TAF1P21675 1872 aa26.34■■□□□ 1.81
HSPG2-205ENST00000427897 POTECB2RU33 542 aa26.34■■□□□ 1.81
HSPG2-205ENST00000427897 RPS8P62241 208 aaKnown RBP26.34■■□□□ 1.81
HSPG2-205ENST00000427897 SLC51AQ86UW1 340 aa26.34■■□□□ 1.81
HSPG2-205ENST00000427897 CCDC85AQ96PX6 553 aaPredicted RBP26.34■■□□□ 1.81
HSPG2-205ENST00000427897 NSFL1CQ9UNZ2 370 aaKnown RBP26.34■■□□□ 1.81
HSPG2-205ENST00000427897 SNED1Q8TER0 1413 aa26.33■■□□□ 1.81
HSPG2-205ENST00000427897 NEURL1BA8MQ27 555 aa26.33■■□□□ 1.81
HSPG2-205ENST00000427897 GPC2Q8N158 579 aa26.33■■□□□ 1.81
HSPG2-205ENST00000427897 E9PSI1 815 aa26.32■■□□□ 1.8
HSPG2-205ENST00000427897 RTFDC1Q9BY42 306 aaPredicted RBP26.32■■□□□ 1.8
HSPG2-205ENST00000427897 CDHR2Q9BYE9 1310 aa26.32■■□□□ 1.8
HSPG2-205ENST00000427897 C6orf229H3BNL8 230 aa26.31■■□□□ 1.8
HSPG2-205ENST00000427897 HACL1Q9UJ83 578 aa26.31■■□□□ 1.8
HSPG2-205ENST00000427897 LMOD1P29536 600 aaPredicted RBP26.3■■□□□ 1.8
HSPG2-205ENST00000427897 EAPPQ56P03 285 aaPredicted RBP26.3■■□□□ 1.8
HSPG2-205ENST00000427897 DIEXFQ68CQ4 756 aaKnown RBP26.3■■□□□ 1.8
HSPG2-205ENST00000427897 UBE3BQ7Z3V4 1068 aa26.3■■□□□ 1.8
HSPG2-205ENST00000427897 LINS1Q8NG48 757 aa26.3■■□□□ 1.8
HSPG2-205ENST00000427897 L3MBTL3Q96JM7 780 aaPredicted RBP26.3■■□□□ 1.8
HSPG2-205ENST00000427897 SEC31BQ9NQW1 1179 aa26.3■■□□□ 1.8
HSPG2-205ENST00000427897 CLEC11AQ9Y240 323 aa26.3■■□□□ 1.8
HSPG2-205ENST00000427897 ZNF521Q96K83 1311 aa26.3■■□□□ 1.8
HSPG2-205ENST00000427897 ANKRD18AQ8IVF6 992 aa26.29■■□□□ 1.8
HSPG2-205ENST00000427897 CTSWP56202 376 aa26.28■■□□□ 1.8
HSPG2-205ENST00000427897 GCKRQ14397 625 aa26.28■■□□□ 1.8
HSPG2-205ENST00000427897 WASHC4Q2M389 1173 aa26.28■■□□□ 1.8
HSPG2-205ENST00000427897 ANKIB1Q9P2G1 1089 aa26.28■■□□□ 1.8
HSPG2-205ENST00000427897 ZNRF3Q9ULT6 936 aa26.28■■□□□ 1.8
HSPG2-205ENST00000427897 G3V3G9 751 aa26.27■■□□□ 1.8
HSPG2-205ENST00000427897 DCAF8Q5TAQ9 597 aa26.27■■□□□ 1.8
HSPG2-205ENST00000427897 CDC5LQ99459 802 aaKnown RBP26.27■■□□□ 1.8
HSPG2-205ENST00000427897 EYA3Q99504 573 aa26.27■■□□□ 1.8
HSPG2-205ENST00000427897 TAF1DQ9H5J8 278 aaPredicted RBP26.27■■□□□ 1.8
HSPG2-205ENST00000427897 SCN4AP35499 1836 aa26.27■■□□□ 1.8
HSPG2-205ENST00000427897 F6X3S4 739 aa26.26■■□□□ 1.79
HSPG2-205ENST00000427897 H7C1W4 665 aa26.26■■□□□ 1.79
HSPG2-205ENST00000427897 RIMBP2O15034 1052 aa26.26■■□□□ 1.79
HSPG2-205ENST00000427897 EPHX2P34913 555 aa26.26■■□□□ 1.79
HSPG2-205ENST00000427897 GPSM2P81274 684 aa26.26■■□□□ 1.79
HSPG2-205ENST00000427897 KIAA2012Q0VF49 1180 aa26.26■■□□□ 1.79
HSPG2-205ENST00000427897 CHADLQ6NUI6 762 aa26.26■■□□□ 1.79
HSPG2-205ENST00000427897 SLC4A10Q6U841 1118 aa26.25■■□□□ 1.79
HSPG2-205ENST00000427897 PNMA8AQ86V59 439 aaPredicted RBP26.25■■□□□ 1.79
HSPG2-205ENST00000427897 SLFN5Q08AF3 891 aa26.24■■□□□ 1.79
HSPG2-205ENST00000427897 TNIP1Q15025 636 aa26.24■■□□□ 1.79
HSPG2-205ENST00000427897 TTLL11Q8NHH1 800 aa26.24■■□□□ 1.79
HSPG2-205ENST00000427897 LDHDQ86WU2 507 aa26.23■■□□□ 1.79
HSPG2-205ENST00000427897 ZC3H12CQ9C0D7 883 aaKnown RBP26.23■■□□□ 1.79
HSPG2-205ENST00000427897 COL4A5P29400 1685 aa26.22■■□□□ 1.79
HSPG2-205ENST00000427897 CIAPIN1Q6FI81 312 aa26.22■■□□□ 1.79
HSPG2-205ENST00000427897 GGA1Q9UJY5 639 aa26.22■■□□□ 1.79
HSPG2-205ENST00000427897 CXCL9Q07325 125 aa26.21■■□□□ 1.79
HSPG2-205ENST00000427897 BCL2L13Q9BXK5 485 aa26.21■■□□□ 1.79
HSPG2-205ENST00000427897 GREM2Q9H772 168 aa26.21■■□□□ 1.79
HSPG2-205ENST00000427897 C9orf78Q9NZ63 289 aaPredicted RBP26.21■■□□□ 1.79
HSPG2-205ENST00000427897 LRRC37AA6NMS7 1700 aa26.21■■□□□ 1.79
HSPG2-205ENST00000427897 MYH3P11055 1940 aa26.2■■□□□ 1.79
HSPG2-205ENST00000427897 RAD17O75943 681 aa26.2■■□□□ 1.78
HSPG2-205ENST00000427897 UFL1O94874 794 aa26.2■■□□□ 1.78
HSPG2-205ENST00000427897 POTEIP0CG38 1075 aa26.2■■□□□ 1.78
HSPG2-205ENST00000427897 POTEJP0CG39 1038 aa26.2■■□□□ 1.78
HSPG2-205ENST00000427897 IGHMBP2P38935 993 aaKnown RBP26.2■■□□□ 1.78
HSPG2-205ENST00000427897 TBC1D16Q8TBP0 767 aa26.2■■□□□ 1.78
HSPG2-205ENST00000427897 POLLQ9UGP5 575 aa26.2■■□□□ 1.78
HSPG2-205ENST00000427897 BEND3Q5T5X7 828 aa26.19■■□□□ 1.78
HSPG2-205ENST00000427897 CDCA7LQ96GN5 454 aa26.19■■□□□ 1.78
HSPG2-205ENST00000427897 CHMP3Q9Y3E7 222 aa26.19■■□□□ 1.78
HSPG2-205ENST00000427897 MPHOSPH8Q99549 860 aa26.18■■□□□ 1.78
HSPG2-205ENST00000427897 SRCIN1Q9C0H9 1055 aa26.18■■□□□ 1.78
HSPG2-205ENST00000427897 DBNDD1Q9H9R9 158 aa26.18■■□□□ 1.78
HSPG2-205ENST00000427897 PODXL2Q9NZ53 605 aa26.18■■□□□ 1.78
HSPG2-205ENST00000427897 HTRA3P83110 453 aa26.17■■□□□ 1.78
HSPG2-205ENST00000427897 DOK7Q18PE1 504 aa26.17■■□□□ 1.78
HSPG2-205ENST00000427897 PLA2G12BQ9BX93 195 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms