RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 TMC4Q7Z404 712 aa18.84■□□□□ 0.61
KDM3A-204ENST00000427678 TTLL11Q8NHH1 800 aa18.84■□□□□ 0.61
KDM3A-204ENST00000427678 FRAT1Q92837 279 aaPredicted RBP18.84■□□□□ 0.61
KDM3A-204ENST00000427678 TAOK3Q9H2K8 898 aa18.84■□□□□ 0.61
KDM3A-204ENST00000427678 ATP6V0A2Q9Y487 856 aa18.84■□□□□ 0.61
KDM3A-204ENST00000427678 LMNB1P20700 586 aa18.83■□□□□ 0.6
KDM3A-204ENST00000427678 C9orf131Q5VYM1 1079 aa18.83■□□□□ 0.6
KDM3A-204ENST00000427678 OLFM4Q6UX06 510 aa18.83■□□□□ 0.6
KDM3A-204ENST00000427678 SP8Q8IXZ3 490 aa18.83■□□□□ 0.6
KDM3A-204ENST00000427678 NFKBIEO00221 500 aa18.82■□□□□ 0.6
KDM3A-204ENST00000427678 CCDC85AQ96PX6 553 aaPredicted RBP18.82■□□□□ 0.6
KDM3A-204ENST00000427678 BRCA1P38398 1863 aaKnown RBP18.82■□□□□ 0.6
KDM3A-204ENST00000427678 LTBP3Q9NS15 1303 aa18.81■□□□□ 0.6
KDM3A-204ENST00000427678 RASSF7Q02833 373 aa18.81■□□□□ 0.6
KDM3A-204ENST00000427678 ZKSCAN2Q63HK3 967 aa18.81■□□□□ 0.6
KDM3A-204ENST00000427678 ATF7IPQ6VMQ6 1270 aa18.81■□□□□ 0.6
KDM3A-204ENST00000427678 CELF1Q92879 486 aaKnown RBP18.81■□□□□ 0.6
KDM3A-204ENST00000427678 YTHDC1Q96MU7 727 aaKnown RBP18.81■□□□□ 0.6
KDM3A-204ENST00000427678 SEC31BQ9NQW1 1179 aa18.81■□□□□ 0.6
KDM3A-204ENST00000427678 RNF181Q9P0P0 153 aa18.81■□□□□ 0.6
KDM3A-204ENST00000427678 TNRC6CQ9HCJ0 1690 aaKnown RBP18.81■□□□□ 0.6
KDM3A-204ENST00000427678 COL11A2P13942 1736 aaPredicted RBP18.8■□□□□ 0.6
KDM3A-204ENST00000427678 CSF1RP07333 972 aa18.8■□□□□ 0.6
KDM3A-204ENST00000427678 FKBP4Q02790 459 aaKnown RBP eCLIP18.8■□□□□ 0.6
KDM3A-204ENST00000427678 CDC5LQ99459 802 aaKnown RBP18.8■□□□□ 0.6
KDM3A-204ENST00000427678 USP44Q9H0E7 712 aa18.8■□□□□ 0.6
KDM3A-204ENST00000427678 DLEC1Q9Y238 1755 aa18.8■□□□□ 0.6
KDM3A-204ENST00000427678 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
KDM3A-204ENST00000427678 UTYO14607 1347 aa18.79■□□□□ 0.6
KDM3A-204ENST00000427678 NBPF7P0C2Y1 421 aaPredicted RBP18.79■□□□□ 0.6
KDM3A-204ENST00000427678 FOXO4P98177 505 aa18.79■□□□□ 0.6
KDM3A-204ENST00000427678 ANKRD18AQ8IVF6 992 aa18.79■□□□□ 0.6
KDM3A-204ENST00000427678 PSMD1Q99460 953 aa18.79■□□□□ 0.6
KDM3A-204ENST00000427678 GREM2Q9H772 168 aa18.79■□□□□ 0.6
KDM3A-204ENST00000427678 TRIM27P14373 513 aa18.78■□□□□ 0.6
KDM3A-204ENST00000427678 MPNDQ8N594 471 aa18.78■□□□□ 0.6
KDM3A-204ENST00000427678 ARFGEF1Q9Y6D6 1849 aa18.78■□□□□ 0.6
KDM3A-204ENST00000427678 PRELPP51888 382 aa18.77■□□□□ 0.6
KDM3A-204ENST00000427678 INTS3Q68E01 1043 aaKnown RBP18.77■□□□□ 0.6
KDM3A-204ENST00000427678 LMBR1LQ6UX01 489 aa18.77■□□□□ 0.6
KDM3A-204ENST00000427678 DPP8Q6V1X1 898 aaPredicted RBP18.77■□□□□ 0.6
KDM3A-204ENST00000427678 ZNF277Q9NRM2 450 aaPredicted RBP18.77■□□□□ 0.6
KDM3A-204ENST00000427678 RCAN3Q9UKA8 241 aa18.77■□□□□ 0.6
KDM3A-204ENST00000427678 HDAC5Q9UQL6 1122 aa18.77■□□□□ 0.6
KDM3A-204ENST00000427678 RTL9Q8NET4 1388 aa18.77■□□□□ 0.6
KDM3A-204ENST00000427678 ITGA6P23229 1130 aa18.76■□□□□ 0.59
KDM3A-204ENST00000427678 IFIT5Q13325 482 aaKnown RBP18.76■□□□□ 0.59
KDM3A-204ENST00000427678 SUPT20HQ8NEM7 779 aa18.76■□□□□ 0.59
KDM3A-204ENST00000427678 CLUAP1Q96AJ1 413 aa18.76■□□□□ 0.59
KDM3A-204ENST00000427678 NSFL1CQ9UNZ2 370 aaKnown RBP18.76■□□□□ 0.59
KDM3A-204ENST00000427678 CHMP3Q9Y3E7 222 aa18.76■□□□□ 0.59
KDM3A-204ENST00000427678 ANKRD18BA2A2Z9 1011 aa18.75■□□□□ 0.59
KDM3A-204ENST00000427678 IGHMBP2P38935 993 aaKnown RBP18.75■□□□□ 0.59
KDM3A-204ENST00000427678 CCDC57Q2TAC2 916 aa18.75■□□□□ 0.59
KDM3A-204ENST00000427678 FAM161AQ3B820 660 aa18.75■□□□□ 0.59
KDM3A-204ENST00000427678 EPHA10Q5JZY3 1008 aa18.75■□□□□ 0.59
KDM3A-204ENST00000427678 ZNF784Q8NCA9 323 aaPredicted RBP18.75■□□□□ 0.59
KDM3A-204ENST00000427678 SUCLG2Q96I99 432 aa18.75■□□□□ 0.59
KDM3A-204ENST00000427678 BSDC1Q9NW68 430 aaPredicted RBP18.75■□□□□ 0.59
KDM3A-204ENST00000427678 IARSP41252 1262 aaKnown RBP18.74■□□□□ 0.59
KDM3A-204ENST00000427678 KAZALD1Q96I82 304 aa18.74■□□□□ 0.59
KDM3A-204ENST00000427678 RTFDC1Q9BY42 306 aaPredicted RBP18.74■□□□□ 0.59
KDM3A-204ENST00000427678 VPS33BQ9H267 617 aa18.74■□□□□ 0.59
KDM3A-204ENST00000427678 ZC3H4Q9UPT8 1303 aaKnown RBP18.74■□□□□ 0.59
KDM3A-204ENST00000427678 UBTFL1P0CB47 393 aaPredicted RBP18.73■□□□□ 0.59
KDM3A-204ENST00000427678 SLC51AQ86UW1 340 aa18.73■□□□□ 0.59
KDM3A-204ENST00000427678 FTSJ3Q8IY81 847 aaKnown RBP18.73■□□□□ 0.59
KDM3A-204ENST00000427678 JDP2Q8WYK2 163 aa18.73■□□□□ 0.59
KDM3A-204ENST00000427678 MPHOSPH8Q99549 860 aa18.73■□□□□ 0.59
KDM3A-204ENST00000427678 ANKIB1Q9P2G1 1089 aa18.73■□□□□ 0.59
KDM3A-204ENST00000427678 DDX60Q8IY21 1712 aaKnown RBP18.73■□□□□ 0.59
KDM3A-204ENST00000427678 GPSM2P81274 684 aa18.72■□□□□ 0.59
KDM3A-204ENST00000427678 DZIP1LQ8IYY4 767 aaKnown RBP18.72■□□□□ 0.59
KDM3A-204ENST00000427678 BICC1Q9H694 974 aaKnown RBP18.72■□□□□ 0.59
KDM3A-204ENST00000427678 CHD4Q14839 1912 aa18.72■□□□□ 0.59
KDM3A-204ENST00000427678 GNAI3P08754 354 aa18.71■□□□□ 0.59
KDM3A-204ENST00000427678 MS4A1P11836 297 aa18.71■□□□□ 0.59
KDM3A-204ENST00000427678 RABL6Q3YEC7 729 aaPredicted RBP18.71■□□□□ 0.59
KDM3A-204ENST00000427678 TAF7LQ5H9L4 462 aa18.71■□□□□ 0.59
KDM3A-204ENST00000427678 DPY19L2Q6NUT2 758 aa18.71■□□□□ 0.59
KDM3A-204ENST00000427678 LARGE2Q8N3Y3 721 aa18.71■□□□□ 0.59
KDM3A-204ENST00000427678 PODXL2Q9NZ53 605 aa18.71■□□□□ 0.59
KDM3A-204ENST00000427678 MINPP1Q9UNW1 487 aa18.71■□□□□ 0.59
KDM3A-204ENST00000427678 TNNQ9UQP3 1299 aa18.71■□□□□ 0.59
KDM3A-204ENST00000427678 C6orf229H3BNL8 230 aa18.7■□□□□ 0.58
KDM3A-204ENST00000427678 PPIP5K2O43314 1243 aa18.7■□□□□ 0.58
KDM3A-204ENST00000427678 SNED1Q8TER0 1413 aa18.7■□□□□ 0.58
KDM3A-204ENST00000427678 TMEM57Q8N5G2 664 aa18.69■□□□□ 0.58
KDM3A-204ENST00000427678 ANKRD44Q8N8A2 993 aa18.69■□□□□ 0.58
KDM3A-204ENST00000427678 ZNF526Q8TF50 670 aaPredicted RBP18.69■□□□□ 0.58
KDM3A-204ENST00000427678 MEIS3Q99687 375 aa18.69■□□□□ 0.58
KDM3A-204ENST00000427678 ANKRD2Q9GZV1 360 aa18.69■□□□□ 0.58
KDM3A-204ENST00000427678 GPBP1L1Q9HC44 474 aaPredicted RBP18.69■□□□□ 0.58
KDM3A-204ENST00000427678 KDM2BQ8NHM5 1336 aa18.69■□□□□ 0.58
KDM3A-204ENST00000427678 WASHC4Q2M389 1173 aa18.68■□□□□ 0.58
KDM3A-204ENST00000427678 LDHAL6AQ6ZMR3 332 aa18.68■□□□□ 0.58
KDM3A-204ENST00000427678 TBC1D16Q8TBP0 767 aa18.68■□□□□ 0.58
KDM3A-204ENST00000427678 EYA3Q99504 573 aa18.68■□□□□ 0.58
KDM3A-204ENST00000427678 POLLQ9UGP5 575 aa18.68■□□□□ 0.58
KDM3A-204ENST00000427678 GGA1Q9UJY5 639 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms