RNA–Protein interactions for RNA: ENST00000427217.5

ARPC1B-205, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-205ENST00000427217 SOGA3Q5TF21 947 aa25.38■■□□□ 1.65
ARPC1B-205ENST00000427217 ATF7IPQ6VMQ6 1270 aa25.38■■□□□ 1.65
ARPC1B-205ENST00000427217 JARID2Q92833 1246 aaPredicted RBP25.38■■□□□ 1.65
ARPC1B-205ENST00000427217 COL4A1P02462 1669 aa25.37■■□□□ 1.65
ARPC1B-205ENST00000427217 RTL9Q8NET4 1388 aa25.37■■□□□ 1.65
ARPC1B-205ENST00000427217 DDX46Q7L014 1031 aaKnown RBP25.37■■□□□ 1.65
ARPC1B-205ENST00000427217 C7orf43Q8WVR3 580 aa25.37■■□□□ 1.65
ARPC1B-205ENST00000427217 TRIM27P14373 513 aa25.36■■□□□ 1.65
ARPC1B-205ENST00000427217 CTSWP56202 376 aa25.36■■□□□ 1.65
ARPC1B-205ENST00000427217 CCDC152Q4G0S7 254 aa25.36■■□□□ 1.65
ARPC1B-205ENST00000427217 ZKSCAN2Q63HK3 967 aa25.36■■□□□ 1.65
ARPC1B-205ENST00000427217 C9orf78Q9NZ63 289 aaPredicted RBP25.36■■□□□ 1.65
ARPC1B-205ENST00000427217 GRAPQ13588 217 aa25.35■■□□□ 1.65
ARPC1B-205ENST00000427217 GRAPLQ8TC17 118 aaPredicted RBP25.35■■□□□ 1.65
ARPC1B-205ENST00000427217 FRAT1Q92837 279 aaPredicted RBP25.35■■□□□ 1.65
ARPC1B-205ENST00000427217 RCAN3Q9UKA8 241 aa25.35■■□□□ 1.65
ARPC1B-205ENST00000427217 SNED1Q8TER0 1413 aa25.35■■□□□ 1.65
ARPC1B-205ENST00000427217 C21orf2O43822 256 aa25.34■■□□□ 1.65
ARPC1B-205ENST00000427217 INTS3Q68E01 1043 aaKnown RBP25.34■■□□□ 1.65
ARPC1B-205ENST00000427217 TIAM2Q8IVF5 1701 aa25.34■■□□□ 1.65
ARPC1B-205ENST00000427217 BBOX1O75936 387 aa25.33■■□□□ 1.65
ARPC1B-205ENST00000427217 LTBP1Q14766 1721 aa25.33■■□□□ 1.65
ARPC1B-205ENST00000427217 TMC4Q7Z404 712 aa25.33■■□□□ 1.65
ARPC1B-205ENST00000427217 TTLL11Q8NHH1 800 aa25.33■■□□□ 1.65
ARPC1B-205ENST00000427217 A0A1B0GUL6 1792 aa25.33■■□□□ 1.65
ARPC1B-205ENST00000427217 PPEF1O14829 653 aaPredicted RBP25.32■■□□□ 1.64
ARPC1B-205ENST00000427217 CCDC93Q567U6 631 aa25.32■■□□□ 1.64
ARPC1B-205ENST00000427217 CC2D2BQ6DHV5 1058 aa25.32■■□□□ 1.64
ARPC1B-205ENST00000427217 ARHGAP27Q6ZUM4 889 aa25.32■■□□□ 1.64
ARPC1B-205ENST00000427217 LTBP3Q9NS15 1303 aa25.32■■□□□ 1.64
ARPC1B-205ENST00000427217 CSF1RP07333 972 aa25.31■■□□□ 1.64
ARPC1B-205ENST00000427217 GRIPAP1Q4V328 841 aa25.31■■□□□ 1.64
ARPC1B-205ENST00000427217 USP44Q9H0E7 712 aa25.31■■□□□ 1.64
ARPC1B-205ENST00000427217 NBPF7P0C2Y1 421 aaPredicted RBP25.3■■□□□ 1.64
ARPC1B-205ENST00000427217 FOXO4P98177 505 aa25.29■■□□□ 1.64
ARPC1B-205ENST00000427217 ZNF219Q9P2Y4 722 aaPredicted RBP25.29■■□□□ 1.64
ARPC1B-205ENST00000427217 ATP6V0A2Q9Y487 856 aa25.29■■□□□ 1.64
ARPC1B-205ENST00000427217 NFKBIEO00221 500 aa25.28■■□□□ 1.64
ARPC1B-205ENST00000427217 RTKN2Q8IZC4 609 aa25.28■■□□□ 1.64
ARPC1B-205ENST00000427217 CELF1Q92879 486 aaKnown RBP25.28■■□□□ 1.64
ARPC1B-205ENST00000427217 SP8Q8IXZ3 490 aa25.27■■□□□ 1.64
ARPC1B-205ENST00000427217 CDC5LQ99459 802 aaKnown RBP25.27■■□□□ 1.64
ARPC1B-205ENST00000427217 GREM2Q9H772 168 aa25.27■■□□□ 1.64
ARPC1B-205ENST00000427217 SEC31BQ9NQW1 1179 aa25.27■■□□□ 1.64
ARPC1B-205ENST00000427217 TNNQ9UQP3 1299 aa25.27■■□□□ 1.64
ARPC1B-205ENST00000427217 RPS8P62241 208 aaKnown RBP25.26■■□□□ 1.63
ARPC1B-205ENST00000427217 DZIP1LQ8IYY4 767 aaKnown RBP25.26■■□□□ 1.63
ARPC1B-205ENST00000427217 CLUAP1Q96AJ1 413 aa25.26■■□□□ 1.63
ARPC1B-205ENST00000427217 KAZALD1Q96I82 304 aa25.26■■□□□ 1.63
ARPC1B-205ENST00000427217 SUCLG2Q96I99 432 aa25.26■■□□□ 1.63
ARPC1B-205ENST00000427217 DUOX1Q9NRD9 1551 aa25.26■■□□□ 1.63
ARPC1B-205ENST00000427217 FTSJ3Q8IY81 847 aaKnown RBP25.25■■□□□ 1.63
ARPC1B-205ENST00000427217 CCDC85AQ96PX6 553 aaPredicted RBP25.25■■□□□ 1.63
ARPC1B-205ENST00000427217 TMX4Q9H1E5 349 aaPredicted RBP25.25■■□□□ 1.63
ARPC1B-205ENST00000427217 TAOK3Q9H2K8 898 aa25.25■■□□□ 1.63
ARPC1B-205ENST00000427217 HDAC5Q9UQL6 1122 aa25.25■■□□□ 1.63
ARPC1B-205ENST00000427217 MS4A1P11836 297 aa25.24■■□□□ 1.63
ARPC1B-205ENST00000427217 FKBP4Q02790 459 aaKnown RBP eCLIP25.24■■□□□ 1.63
ARPC1B-205ENST00000427217 RASSF7Q02833 373 aa25.24■■□□□ 1.63
ARPC1B-205ENST00000427217 FAM161AQ3B820 660 aa25.24■■□□□ 1.63
ARPC1B-205ENST00000427217 RABL6Q3YEC7 729 aaPredicted RBP25.24■■□□□ 1.63
ARPC1B-205ENST00000427217 EPHA10Q5JZY3 1008 aa25.24■■□□□ 1.63
ARPC1B-205ENST00000427217 OLFM4Q6UX06 510 aa25.24■■□□□ 1.63
ARPC1B-205ENST00000427217 ANKRD18AQ8IVF6 992 aa25.24■■□□□ 1.63
ARPC1B-205ENST00000427217 PSMD1Q99460 953 aa25.24■■□□□ 1.63
ARPC1B-205ENST00000427217 UBTFL1P0CB47 393 aaPredicted RBP25.23■■□□□ 1.63
ARPC1B-205ENST00000427217 ITGA6P23229 1130 aa25.23■■□□□ 1.63
ARPC1B-205ENST00000427217 LMBR1LQ6UX01 489 aa25.23■■□□□ 1.63
ARPC1B-205ENST00000427217 TMEM57Q8N5G2 664 aa25.23■■□□□ 1.63
ARPC1B-205ENST00000427217 LMNB1P20700 586 aa25.22■■□□□ 1.63
ARPC1B-205ENST00000427217 ANKRD18BA2A2Z9 1011 aa25.21■■□□□ 1.63
ARPC1B-205ENST00000427217 GNAI3P08754 354 aa25.21■■□□□ 1.63
ARPC1B-205ENST00000427217 MEIS3Q99687 375 aa25.21■■□□□ 1.63
ARPC1B-205ENST00000427217 BICC1Q9H694 974 aaKnown RBP25.21■■□□□ 1.63
ARPC1B-205ENST00000427217 RLBP1P12271 317 aa25.2■■□□□ 1.62
ARPC1B-205ENST00000427217 IFIT5Q13325 482 aaKnown RBP25.2■■□□□ 1.62
ARPC1B-205ENST00000427217 ANKRD44Q8N8A2 993 aa25.2■■□□□ 1.62
ARPC1B-205ENST00000427217 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.2■■□□□ 1.62
ARPC1B-205ENST00000427217 ZC3H4Q9UPT8 1303 aaKnown RBP25.19■■□□□ 1.62
ARPC1B-205ENST00000427217 PRELPP51888 382 aa25.19■■□□□ 1.62
ARPC1B-205ENST00000427217 SLC51AQ86UW1 340 aa25.19■■□□□ 1.62
ARPC1B-205ENST00000427217 RTFDC1Q9BY42 306 aaPredicted RBP25.19■■□□□ 1.62
ARPC1B-205ENST00000427217 BSDC1Q9NW68 430 aaPredicted RBP25.19■■□□□ 1.62
ARPC1B-205ENST00000427217 IGHMBP2P38935 993 aaKnown RBP25.18■■□□□ 1.62
ARPC1B-205ENST00000427217 CCDC57Q2TAC2 916 aa25.18■■□□□ 1.62
ARPC1B-205ENST00000427217 C9orf131Q5VYM1 1079 aa25.18■■□□□ 1.62
ARPC1B-205ENST00000427217 CHMP3Q9Y3E7 222 aa25.18■■□□□ 1.62
ARPC1B-205ENST00000427217 MPNDQ8N594 471 aa25.17■■□□□ 1.62
ARPC1B-205ENST00000427217 SUPT20HQ8NEM7 779 aa25.17■■□□□ 1.62
ARPC1B-205ENST00000427217 RNF181Q9P0P0 153 aa25.17■■□□□ 1.62
ARPC1B-205ENST00000427217 DPP8Q6V1X1 898 aaPredicted RBP25.16■■□□□ 1.62
ARPC1B-205ENST00000427217 ITPRIPQ8IWB1 547 aa25.16■■□□□ 1.62
ARPC1B-205ENST00000427217 VPS33BQ9H267 617 aa25.16■■□□□ 1.62
ARPC1B-205ENST00000427217 PODXL2Q9NZ53 605 aa25.16■■□□□ 1.62
ARPC1B-205ENST00000427217 MPHOSPH8Q99549 860 aa25.15■■□□□ 1.62
ARPC1B-205ENST00000427217 LRRFIP2Q9Y608 721 aaKnown RBP25.15■■□□□ 1.62
ARPC1B-205ENST00000427217 IARSP41252 1262 aaKnown RBP25.14■■□□□ 1.62
ARPC1B-205ENST00000427217 PDE3AQ14432 1141 aa25.14■■□□□ 1.62
ARPC1B-205ENST00000427217 PANK1Q8TE04 598 aa25.14■■□□□ 1.62
ARPC1B-205ENST00000427217 PSME4Q14997 1843 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms