RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 TRIM27P14373 513 aa27.23■■□□□ 1.95
RPUSD3-205ENST00000427174 ATF7IPQ6VMQ6 1270 aa27.23■■□□□ 1.95
RPUSD3-205ENST00000427174 TNNQ9UQP3 1299 aa27.22■■□□□ 1.95
RPUSD3-205ENST00000427174 SPEF2Q9C093 1822 aa27.21■■□□□ 1.95
RPUSD3-205ENST00000427174 CTSWP56202 376 aa27.21■■□□□ 1.95
RPUSD3-205ENST00000427174 DICER1Q9UPY3 1922 aaKnown RBP27.21■■□□□ 1.95
RPUSD3-205ENST00000427174 C21orf2O43822 256 aa27.2■■□□□ 1.94
RPUSD3-205ENST00000427174 CCT4P50991 539 aaKnown RBP27.2■■□□□ 1.94
RPUSD3-205ENST00000427174 INTS3Q68E01 1043 aaKnown RBP27.2■■□□□ 1.94
RPUSD3-205ENST00000427174 TTLL11Q8NHH1 800 aa27.2■■□□□ 1.94
RPUSD3-205ENST00000427174 FRAT1Q92837 279 aaPredicted RBP27.2■■□□□ 1.94
RPUSD3-205ENST00000427174 USP44Q9H0E7 712 aa27.2■■□□□ 1.94
RPUSD3-205ENST00000427174 RTL9Q8NET4 1388 aa27.2■■□□□ 1.94
RPUSD3-205ENST00000427174 NBPF7P0C2Y1 421 aaPredicted RBP27.19■■□□□ 1.94
RPUSD3-205ENST00000427174 ZKSCAN2Q63HK3 967 aa27.19■■□□□ 1.94
RPUSD3-205ENST00000427174 DDX46Q7L014 1031 aaKnown RBP27.19■■□□□ 1.94
RPUSD3-205ENST00000427174 C9orf78Q9NZ63 289 aaPredicted RBP27.19■■□□□ 1.94
RPUSD3-205ENST00000427174 RCAN3Q9UKA8 241 aa27.19■■□□□ 1.94
RPUSD3-205ENST00000427174 CSF1RP07333 972 aa27.18■■□□□ 1.94
RPUSD3-205ENST00000427174 FOXO4P98177 505 aa27.18■■□□□ 1.94
RPUSD3-205ENST00000427174 GRAPQ13588 217 aa27.18■■□□□ 1.94
RPUSD3-205ENST00000427174 CCDC152Q4G0S7 254 aa27.18■■□□□ 1.94
RPUSD3-205ENST00000427174 GRAPLQ8TC17 118 aaPredicted RBP27.18■■□□□ 1.94
RPUSD3-205ENST00000427174 OLFM4Q6UX06 510 aa27.17■■□□□ 1.94
RPUSD3-205ENST00000427174 ARHGAP27Q6ZUM4 889 aa27.17■■□□□ 1.94
RPUSD3-205ENST00000427174 KAZALD1Q96I82 304 aa27.17■■□□□ 1.94
RPUSD3-205ENST00000427174 ZNF219Q9P2Y4 722 aaPredicted RBP27.17■■□□□ 1.94
RPUSD3-205ENST00000427174 NFKBIEO00221 500 aa27.16■■□□□ 1.94
RPUSD3-205ENST00000427174 PPEF1O14829 653 aaPredicted RBP27.16■■□□□ 1.94
RPUSD3-205ENST00000427174 BBOX1O75936 387 aa27.16■■□□□ 1.94
RPUSD3-205ENST00000427174 SOGA3Q5TF21 947 aa27.16■■□□□ 1.94
RPUSD3-205ENST00000427174 SLC51AQ86UW1 340 aa27.16■■□□□ 1.94
RPUSD3-205ENST00000427174 CELF1Q92879 486 aaKnown RBP27.16■■□□□ 1.94
RPUSD3-205ENST00000427174 SEC31BQ9NQW1 1179 aa27.16■■□□□ 1.94
RPUSD3-205ENST00000427174 LTBP1Q14766 1721 aa27.16■■□□□ 1.94
RPUSD3-205ENST00000427174 EPHA10Q5JZY3 1008 aa27.15■■□□□ 1.94
RPUSD3-205ENST00000427174 SUCLG2Q96I99 432 aa27.14■■□□□ 1.94
RPUSD3-205ENST00000427174 GREM2Q9H772 168 aa27.14■■□□□ 1.94
RPUSD3-205ENST00000427174 ATP6V0A2Q9Y487 856 aa27.14■■□□□ 1.94
RPUSD3-205ENST00000427174 LTBP3Q9NS15 1303 aa27.14■■□□□ 1.93
RPUSD3-205ENST00000427174 PRELPP51888 382 aa27.13■■□□□ 1.93
RPUSD3-205ENST00000427174 CCDC93Q567U6 631 aa27.13■■□□□ 1.93
RPUSD3-205ENST00000427174 CC2D2BQ6DHV5 1058 aa27.13■■□□□ 1.93
RPUSD3-205ENST00000427174 CLUAP1Q96AJ1 413 aa27.13■■□□□ 1.93
RPUSD3-205ENST00000427174 CCDC85AQ96PX6 553 aaPredicted RBP27.13■■□□□ 1.93
RPUSD3-205ENST00000427174 TMC4Q7Z404 712 aa27.12■■□□□ 1.93
RPUSD3-205ENST00000427174 RPS8P62241 208 aaKnown RBP27.11■■□□□ 1.93
RPUSD3-205ENST00000427174 RASSF7Q02833 373 aa27.11■■□□□ 1.93
RPUSD3-205ENST00000427174 SP8Q8IXZ3 490 aa27.11■■□□□ 1.93
RPUSD3-205ENST00000427174 A0A1B0GUL6 1792 aa27.11■■□□□ 1.93
RPUSD3-205ENST00000427174 RLBP1P12271 317 aa27.1■■□□□ 1.93
RPUSD3-205ENST00000427174 TIAM2Q8IVF5 1701 aa27.1■■□□□ 1.93
RPUSD3-205ENST00000427174 DUOX1Q9NRD9 1551 aa27.09■■□□□ 1.93
RPUSD3-205ENST00000427174 FAM161AQ3B820 660 aa27.09■■□□□ 1.93
RPUSD3-205ENST00000427174 RABL6Q3YEC7 729 aaPredicted RBP27.09■■□□□ 1.93
RPUSD3-205ENST00000427174 RTKN2Q8IZC4 609 aa27.09■■□□□ 1.93
RPUSD3-205ENST00000427174 TMEM57Q8N5G2 664 aa27.09■■□□□ 1.93
RPUSD3-205ENST00000427174 GRIPAP1Q4V328 841 aa27.08■■□□□ 1.93
RPUSD3-205ENST00000427174 LMBR1LQ6UX01 489 aa27.08■■□□□ 1.93
RPUSD3-205ENST00000427174 DZIP1LQ8IYY4 767 aaKnown RBP27.08■■□□□ 1.93
RPUSD3-205ENST00000427174 ANKRD44Q8N8A2 993 aa27.08■■□□□ 1.93
RPUSD3-205ENST00000427174 MEIS3Q99687 375 aa27.08■■□□□ 1.93
RPUSD3-205ENST00000427174 ITGA6P23229 1130 aa27.07■■□□□ 1.92
RPUSD3-205ENST00000427174 CDC5LQ99459 802 aaKnown RBP27.07■■□□□ 1.92
RPUSD3-205ENST00000427174 PSMD1Q99460 953 aa27.07■■□□□ 1.92
RPUSD3-205ENST00000427174 TAOK3Q9H2K8 898 aa27.07■■□□□ 1.92
RPUSD3-205ENST00000427174 BICC1Q9H694 974 aaKnown RBP27.07■■□□□ 1.92
RPUSD3-205ENST00000427174 FKBP4Q02790 459 aaKnown RBP eCLIP27.06■■□□□ 1.92
RPUSD3-205ENST00000427174 ANKRD18AQ8IVF6 992 aa27.05■■□□□ 1.92
RPUSD3-205ENST00000427174 UBTFL1P0CB47 393 aaPredicted RBP27.04■■□□□ 1.92
RPUSD3-205ENST00000427174 LMNB1P20700 586 aa27.04■■□□□ 1.92
RPUSD3-205ENST00000427174 FTSJ3Q8IY81 847 aaKnown RBP27.04■■□□□ 1.92
RPUSD3-205ENST00000427174 PLIN1O60240 522 aa27.03■■□□□ 1.92
RPUSD3-205ENST00000427174 C9orf131Q5VYM1 1079 aa27.03■■□□□ 1.92
RPUSD3-205ENST00000427174 RTFDC1Q9BY42 306 aaPredicted RBP27.03■■□□□ 1.92
RPUSD3-205ENST00000427174 BSDC1Q9NW68 430 aaPredicted RBP27.03■■□□□ 1.92
RPUSD3-205ENST00000427174 PANK1Q8TE04 598 aa27.02■■□□□ 1.92
RPUSD3-205ENST00000427174 ANKRD18BA2A2Z9 1011 aa27.01■■□□□ 1.91
RPUSD3-205ENST00000427174 GNAI3P08754 354 aa27.01■■□□□ 1.91
RPUSD3-205ENST00000427174 IFIT5Q13325 482 aaKnown RBP27.01■■□□□ 1.91
RPUSD3-205ENST00000427174 COL4A5P29400 1685 aa27.01■■□□□ 1.91
RPUSD3-205ENST00000427174 MS4A1P11836 297 aa27■■□□□ 1.91
RPUSD3-205ENST00000427174 MPNDQ8N594 471 aa27■■□□□ 1.91
RPUSD3-205ENST00000427174 TMX4Q9H1E5 349 aaPredicted RBP27■■□□□ 1.91
RPUSD3-205ENST00000427174 PODXL2Q9NZ53 605 aa27■■□□□ 1.91
RPUSD3-205ENST00000427174 RNF181Q9P0P0 153 aa27■■□□□ 1.91
RPUSD3-205ENST00000427174 LRRFIP2Q9Y608 721 aaKnown RBP27■■□□□ 1.91
RPUSD3-205ENST00000427174 GPSM2P81274 684 aa26.99■■□□□ 1.91
RPUSD3-205ENST00000427174 ZNF277Q9NRM2 450 aaPredicted RBP26.99■■□□□ 1.91
RPUSD3-205ENST00000427174 CHMP3Q9Y3E7 222 aa26.99■■□□□ 1.91
RPUSD3-205ENST00000427174 ZBTB7BO15156 539 aaPredicted RBP26.98■■□□□ 1.91
RPUSD3-205ENST00000427174 YY1P25490 414 aa26.98■■□□□ 1.91
RPUSD3-205ENST00000427174 IGHMBP2P38935 993 aaKnown RBP26.98■■□□□ 1.91
RPUSD3-205ENST00000427174 CCDC57Q2TAC2 916 aa26.98■■□□□ 1.91
RPUSD3-205ENST00000427174 DPP8Q6V1X1 898 aaPredicted RBP26.98■■□□□ 1.91
RPUSD3-205ENST00000427174 MINPP1Q9UNW1 487 aa26.98■■□□□ 1.91
RPUSD3-205ENST00000427174 HDAC5Q9UQL6 1122 aa26.98■■□□□ 1.91
RPUSD3-205ENST00000427174 IARSP41252 1262 aaKnown RBP26.97■■□□□ 1.91
RPUSD3-205ENST00000427174 ITPRIPQ8IWB1 547 aa26.97■■□□□ 1.91
RPUSD3-205ENST00000427174 ZC3H4Q9UPT8 1303 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms