RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 ATG9AQ7Z3C6 839 aa23.05■■□□□ 1.28
SNX17-202ENST00000427123 ZNF589Q86UQ0 364 aaPredicted RBP23.05■■□□□ 1.28
SNX17-202ENST00000427123 VSIG10Q8N0Z9 540 aa23.04■■□□□ 1.28
SNX17-202ENST00000427123 LARP6Q9BRS8 491 aaKnown RBP23.04■■□□□ 1.28
SNX17-202ENST00000427123 ISCA1Q9BUE6 129 aa23.04■■□□□ 1.28
SNX17-202ENST00000427123 TEX13AQ9BXU3 409 aaPredicted RBP23.04■■□□□ 1.28
SNX17-202ENST00000427123 ATG3Q9NT62 314 aa23.04■■□□□ 1.28
SNX17-202ENST00000427123 ZNF609O15014 1411 aa23.04■■□□□ 1.28
SNX17-202ENST00000427123 TAF5LO75529 589 aa23.04■■□□□ 1.28
SNX17-202ENST00000427123 ZSCAN22P10073 491 aaPredicted RBP23.04■■□□□ 1.28
SNX17-202ENST00000427123 DNAJC2Q99543 621 aaKnown RBP23.04■■□□□ 1.28
SNX17-202ENST00000427123 SPEF2Q9C093 1822 aa23.03■■□□□ 1.28
SNX17-202ENST00000427123 STX6O43752 255 aa23.03■■□□□ 1.28
SNX17-202ENST00000427123 NASPP49321 788 aaPredicted RBP23.03■■□□□ 1.28
SNX17-202ENST00000427123 TSGA10IPQ3SY00 556 aa23.03■■□□□ 1.28
SNX17-202ENST00000427123 CCDC83Q8IWF9 413 aa23.03■■□□□ 1.28
SNX17-202ENST00000427123 ALDH8A1Q9H2A2 487 aaPredicted RBP23.03■■□□□ 1.28
SNX17-202ENST00000427123 RBM27Q9P2N5 1060 aaKnown RBP23.03■■□□□ 1.28
SNX17-202ENST00000427123 LRP6O75581 1613 aa23.03■■□□□ 1.28
SNX17-202ENST00000427123 PALLDQ8WX93 1383 aa23.03■■□□□ 1.28
SNX17-202ENST00000427123 CIAO1O76071 339 aa23.03■■□□□ 1.28
SNX17-202ENST00000427123 USPL1Q5W0Q7 1092 aa23.03■■□□□ 1.28
SNX17-202ENST00000427123 BLOC1S2Q6QNY1 142 aa23.03■■□□□ 1.28
SNX17-202ENST00000427123 DISP2A7MBM2 1401 aa23.02■■□□□ 1.28
SNX17-202ENST00000427123 EYA2O00167 538 aa23.02■■□□□ 1.28
SNX17-202ENST00000427123 SYT1P21579 422 aa23.02■■□□□ 1.28
SNX17-202ENST00000427123 ANKRD1Q15327 319 aa23.02■■□□□ 1.28
SNX17-202ENST00000427123 TICAM2Q86XR7 235 aa23.02■■□□□ 1.28
SNX17-202ENST00000427123 TMEM87AQ8NBN3 555 aa23.02■■□□□ 1.28
SNX17-202ENST00000427123 TMEM63CQ9P1W3 806 aa23.02■■□□□ 1.28
SNX17-202ENST00000427123 TCIRG1Q13488 830 aa23.01■■□□□ 1.27
SNX17-202ENST00000427123 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.01■■□□□ 1.27
SNX17-202ENST00000427123 RPS6KB1P23443 525 aa23.01■■□□□ 1.27
SNX17-202ENST00000427123 KRT32Q14532 448 aa23.01■■□□□ 1.27
SNX17-202ENST00000427123 KBTBD3Q8NAB2 608 aa23.01■■□□□ 1.27
SNX17-202ENST00000427123 BTG4Q9NY30 223 aa23.01■■□□□ 1.27
SNX17-202ENST00000427123 NSFL1CQ9UNZ2 370 aaKnown RBP23.01■■□□□ 1.27
SNX17-202ENST00000427123 WNK3Q9BYP7 1800 aa23.01■■□□□ 1.27
SNX17-202ENST00000427123 ME3Q16798 604 aa23■■□□□ 1.27
SNX17-202ENST00000427123 KIF6Q6ZMV9 814 aa23■■□□□ 1.27
SNX17-202ENST00000427123 SH3TC1Q8TE82 1336 aa23■■□□□ 1.27
SNX17-202ENST00000427123 GJB2P29033 226 aa22.99■■□□□ 1.27
SNX17-202ENST00000427123 TRIM28Q13263 835 aaKnown RBP22.99■■□□□ 1.27
SNX17-202ENST00000427123 MCMDC2Q4G0Z9 681 aa22.99■■□□□ 1.27
SNX17-202ENST00000427123 PIGBQ92521 554 aa22.99■■□□□ 1.27
SNX17-202ENST00000427123 SYAP1Q96A49 352 aaPredicted RBP22.99■■□□□ 1.27
SNX17-202ENST00000427123 ATP6V1DQ9Y5K8 247 aa22.99■■□□□ 1.27
SNX17-202ENST00000427123 NDUFB9Q9Y6M9 179 aa22.99■■□□□ 1.27
SNX17-202ENST00000427123 U3KPZ7 1027 aaPredicted RBP22.99■■□□□ 1.27
SNX17-202ENST00000427123 F13A1P00488 732 aa22.99■■□□□ 1.27
SNX17-202ENST00000427123 CCDC173Q0VFZ6 552 aa22.99■■□□□ 1.27
SNX17-202ENST00000427123 ST3GAL1Q11201 340 aa22.99■■□□□ 1.27
SNX17-202ENST00000427123 DDX46Q7L014 1031 aaKnown RBP22.99■■□□□ 1.27
SNX17-202ENST00000427123 NEUROD6Q96NK8 337 aa22.99■■□□□ 1.27
SNX17-202ENST00000427123 TPCN1Q9ULQ1 816 aa22.99■■□□□ 1.27
SNX17-202ENST00000427123 COL22A1Q8NFW1 1626 aaPredicted RBP22.99■■□□□ 1.27
SNX17-202ENST00000427123 TCHHQ07283 1943 aa22.99■■□□□ 1.27
SNX17-202ENST00000427123 DNAJC10Q8IXB1 793 aa22.98■■□□□ 1.27
SNX17-202ENST00000427123 ANP32BQ92688 251 aaKnown RBP22.98■■□□□ 1.27
SNX17-202ENST00000427123 ASAP1Q9ULH1 1129 aa22.98■■□□□ 1.27
SNX17-202ENST00000427123 ANKRD36CQ5JPF3 1778 aa22.98■■□□□ 1.27
SNX17-202ENST00000427123 STARD3NLO95772 234 aa22.98■■□□□ 1.27
SNX17-202ENST00000427123 LRSAM1Q6UWE0 723 aa22.98■■□□□ 1.27
SNX17-202ENST00000427123 RRAGDQ9NQL2 400 aaPredicted RBP22.98■■□□□ 1.27
SNX17-202ENST00000427123 LRRC24Q50LG9 513 aa22.97■■□□□ 1.27
SNX17-202ENST00000427123 USP48Q86UV5 1035 aa22.97■■□□□ 1.27
SNX17-202ENST00000427123 PAG1Q9NWQ8 432 aa22.97■■□□□ 1.27
SNX17-202ENST00000427123 FBXO3Q9UK99 471 aa22.97■■□□□ 1.27
SNX17-202ENST00000427123 PCCAP05165 728 aaPredicted RBP22.96■■□□□ 1.27
SNX17-202ENST00000427123 PDIA4P13667 645 aaKnown RBP22.96■■□□□ 1.27
SNX17-202ENST00000427123 PRIM1P49642 420 aaKnown RBP22.96■■□□□ 1.27
SNX17-202ENST00000427123 FOXD4L6Q3SYB3 417 aaPredicted RBP22.96■■□□□ 1.27
SNX17-202ENST00000427123 FOXD4L3Q6VB84 417 aaPredicted RBP22.96■■□□□ 1.27
SNX17-202ENST00000427123 ZNF594Q96JF6 807 aaPredicted RBP22.96■■□□□ 1.27
SNX17-202ENST00000427123 PPP1R9BQ96SB3 815 aa22.96■■□□□ 1.27
SNX17-202ENST00000427123 TAF6LQ9Y6J9 622 aa22.96■■□□□ 1.27
SNX17-202ENST00000427123 COL16A1Q07092 1604 aaPredicted RBP22.96■■□□□ 1.27
SNX17-202ENST00000427123 PLA2G12BQ9BX93 195 aa22.96■■□□□ 1.27
SNX17-202ENST00000427123 ZNF330Q9Y3S2 320 aaPredicted RBP22.96■■□□□ 1.27
SNX17-202ENST00000427123 BCL9O00512 1426 aa22.95■■□□□ 1.26
SNX17-202ENST00000427123 SYCE3A1L190 88 aa22.95■■□□□ 1.26
SNX17-202ENST00000427123 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.95■■□□□ 1.26
SNX17-202ENST00000427123 HELLSQ9NRZ9 838 aa22.95■■□□□ 1.26
SNX17-202ENST00000427123 MTMR6Q9Y217 621 aa22.95■■□□□ 1.26
SNX17-202ENST00000427123 AHDC1Q5TGY3 1603 aaPredicted RBP22.95■■□□□ 1.26
SNX17-202ENST00000427123 GOLIM4O00461 696 aa22.94■■□□□ 1.26
SNX17-202ENST00000427123 TIMM10P62072 90 aa22.94■■□□□ 1.26
SNX17-202ENST00000427123 CCDC57Q2TAC2 916 aa22.94■■□□□ 1.26
SNX17-202ENST00000427123 NECAB1Q8N987 351 aa22.94■■□□□ 1.26
SNX17-202ENST00000427123 TRIM44Q96DX7 344 aaPredicted RBP22.94■■□□□ 1.26
SNX17-202ENST00000427123 RBSNQ9H1K0 784 aa22.94■■□□□ 1.26
SNX17-202ENST00000427123 GDPD2Q9HCC8 539 aa22.94■■□□□ 1.26
SNX17-202ENST00000427123 ROBO1Q9Y6N7 1651 aa22.94■■□□□ 1.26
SNX17-202ENST00000427123 MAP3K15Q6ZN16 1313 aa22.94■■□□□ 1.26
SNX17-202ENST00000427123 A0A1B0GUL7 405 aa22.94■■□□□ 1.26
SNX17-202ENST00000427123 TOB2Q14106 344 aaPredicted RBP22.94■■□□□ 1.26
SNX17-202ENST00000427123 CCDC129Q6ZRS4 1044 aa22.94■■□□□ 1.26
SNX17-202ENST00000427123 CNPY2Q9Y2B0 182 aa22.94■■□□□ 1.26
SNX17-202ENST00000427123 CCDC9Q9Y3X0 531 aaKnown RBP22.94■■□□□ 1.26
SNX17-202ENST00000427123 GADD45BO75293 160 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms