RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 CWF19L2Q2TBE0 894 aaKnown RBP18.56■□□□□ 0.56
NCKIPSD-205ENST00000426678 TMC4Q7Z404 712 aa18.56■□□□□ 0.56
NCKIPSD-205ENST00000426678 DNAAF4Q8WXU2 420 aa18.56■□□□□ 0.56
NCKIPSD-205ENST00000426678 CDHR2Q9BYE9 1310 aa18.55■□□□□ 0.56
NCKIPSD-205ENST00000426678 NEURL1BA8MQ27 555 aa18.55■□□□□ 0.56
NCKIPSD-205ENST00000426678 PDE8AO60658 829 aa18.55■□□□□ 0.56
NCKIPSD-205ENST00000426678 SLC51AQ86UW1 340 aa18.55■□□□□ 0.56
NCKIPSD-205ENST00000426678 SP8Q8IXZ3 490 aa18.55■□□□□ 0.56
NCKIPSD-205ENST00000426678 JDP2Q8WYK2 163 aa18.55■□□□□ 0.56
NCKIPSD-205ENST00000426678 WDR90Q96KV7 1748 aa18.54■□□□□ 0.56
NCKIPSD-205ENST00000426678 VEGFAP15692 232 aaPredicted RBP18.54■□□□□ 0.56
NCKIPSD-205ENST00000426678 SUPT20HQ8NEM7 779 aa18.54■□□□□ 0.56
NCKIPSD-205ENST00000426678 JARID2Q92833 1246 aaPredicted RBP18.54■□□□□ 0.56
NCKIPSD-205ENST00000426678 LRRC37AA6NMS7 1700 aa18.54■□□□□ 0.56
NCKIPSD-205ENST00000426678 SLFN5Q08AF3 891 aa18.53■□□□□ 0.56
NCKIPSD-205ENST00000426678 CCDC152Q4G0S7 254 aa18.53■□□□□ 0.56
NCKIPSD-205ENST00000426678 DPP8Q6V1X1 898 aaPredicted RBP18.53■□□□□ 0.56
NCKIPSD-205ENST00000426678 MIER1Q8N108 512 aa18.53■□□□□ 0.56
NCKIPSD-205ENST00000426678 LARGE2Q8N3Y3 721 aa18.53■□□□□ 0.56
NCKIPSD-205ENST00000426678 MPNDQ8N594 471 aa18.53■□□□□ 0.56
NCKIPSD-205ENST00000426678 CELF1Q92879 486 aaKnown RBP18.53■□□□□ 0.56
NCKIPSD-205ENST00000426678 MYH3P11055 1940 aa18.53■□□□□ 0.56
NCKIPSD-205ENST00000426678 DDNO94850 711 aaPredicted RBP18.52■□□□□ 0.56
NCKIPSD-205ENST00000426678 LINS1Q8NG48 757 aa18.52■□□□□ 0.56
NCKIPSD-205ENST00000426678 RBM46Q8TBY0 533 aaKnown RBP18.52■□□□□ 0.56
NCKIPSD-205ENST00000426678 ZNF541Q9H0D2 1346 aa18.51■□□□□ 0.55
NCKIPSD-205ENST00000426678 PPIP5K2O43314 1243 aa18.51■□□□□ 0.55
NCKIPSD-205ENST00000426678 GCKRQ14397 625 aa18.51■□□□□ 0.55
NCKIPSD-205ENST00000426678 UBE3BQ7Z3V4 1068 aa18.51■□□□□ 0.55
NCKIPSD-205ENST00000426678 NIM1KQ8IY84 436 aa18.51■□□□□ 0.55
NCKIPSD-205ENST00000426678 F6X3S4 739 aa18.5■□□□□ 0.55
NCKIPSD-205ENST00000426678 FZD9O00144 591 aa18.5■□□□□ 0.55
NCKIPSD-205ENST00000426678 CTSWP56202 376 aa18.5■□□□□ 0.55
NCKIPSD-205ENST00000426678 CDCA7LQ96GN5 454 aa18.5■□□□□ 0.55
NCKIPSD-205ENST00000426678 CCDC85AQ96PX6 553 aaPredicted RBP18.5■□□□□ 0.55
NCKIPSD-205ENST00000426678 RTFDC1Q9BY42 306 aaPredicted RBP18.5■□□□□ 0.55
NCKIPSD-205ENST00000426678 VPS33BQ9H267 617 aa18.5■□□□□ 0.55
NCKIPSD-205ENST00000426678 EIF6P56537 245 aaKnown RBP18.49■□□□□ 0.55
NCKIPSD-205ENST00000426678 RPS8P62241 208 aaKnown RBP18.49■□□□□ 0.55
NCKIPSD-205ENST00000426678 AOC3Q16853 763 aa18.49■□□□□ 0.55
NCKIPSD-205ENST00000426678 SEC31BQ9NQW1 1179 aa18.49■□□□□ 0.55
NCKIPSD-205ENST00000426678 COL4A1P02462 1669 aa18.49■□□□□ 0.55
NCKIPSD-205ENST00000426678 COL4A5P29400 1685 aa18.49■□□□□ 0.55
NCKIPSD-205ENST00000426678 IQCA1LA6NCM1 817 aa18.48■□□□□ 0.55
NCKIPSD-205ENST00000426678 H7C1W4 665 aa18.48■□□□□ 0.55
NCKIPSD-205ENST00000426678 NSFL1CQ9UNZ2 370 aaKnown RBP18.48■□□□□ 0.55
NCKIPSD-205ENST00000426678 SCN4AP35499 1836 aa18.47■□□□□ 0.55
NCKIPSD-205ENST00000426678 HSPA6P17066 643 aa18.47■□□□□ 0.55
NCKIPSD-205ENST00000426678 BEND3Q5T5X7 828 aa18.47■□□□□ 0.55
NCKIPSD-205ENST00000426678 ANKRD18AQ8IVF6 992 aa18.47■□□□□ 0.55
NCKIPSD-205ENST00000426678 SMC1BQ8NDV3 1235 aa18.47■□□□□ 0.55
NCKIPSD-205ENST00000426678 L3MBTL3Q96JM7 780 aaPredicted RBP18.47■□□□□ 0.55
NCKIPSD-205ENST00000426678 CDC5LQ99459 802 aaKnown RBP18.47■□□□□ 0.55
NCKIPSD-205ENST00000426678 DUOX1Q9NRD9 1551 aa18.47■□□□□ 0.55
NCKIPSD-205ENST00000426678 POTECB2RU33 542 aa18.46■□□□□ 0.55
NCKIPSD-205ENST00000426678 KIAA2012Q0VF49 1180 aa18.46■□□□□ 0.55
NCKIPSD-205ENST00000426678 FSTL1Q12841 308 aa18.46■□□□□ 0.55
NCKIPSD-205ENST00000426678 SLC4A10Q6U841 1118 aa18.46■□□□□ 0.55
NCKIPSD-205ENST00000426678 GPC2Q8N158 579 aa18.46■□□□□ 0.55
NCKIPSD-205ENST00000426678 MRPL50Q8N5N7 158 aaKnown RBP18.46■□□□□ 0.55
NCKIPSD-205ENST00000426678 TTLL11Q8NHH1 800 aa18.46■□□□□ 0.55
NCKIPSD-205ENST00000426678 GPSM2P81274 684 aa18.45■□□□□ 0.54
NCKIPSD-205ENST00000426678 SSH1Q8WYL5 1049 aa18.45■□□□□ 0.54
NCKIPSD-205ENST00000426678 PLA2G12BQ9BX93 195 aa18.45■□□□□ 0.54
NCKIPSD-205ENST00000426678 GJA3Q9Y6H8 435 aa18.45■□□□□ 0.54
NCKIPSD-205ENST00000426678 PTPRCP08575 1304 aa18.45■□□□□ 0.54
NCKIPSD-205ENST00000426678 SPEF2Q9C093 1822 aa18.44■□□□□ 0.54
NCKIPSD-205ENST00000426678 RTL9Q8NET4 1388 aa18.44■□□□□ 0.54
NCKIPSD-205ENST00000426678 LTBP1Q14766 1721 aa18.44■□□□□ 0.54
NCKIPSD-205ENST00000426678 C6orf229H3BNL8 230 aa18.44■□□□□ 0.54
NCKIPSD-205ENST00000426678 CT47B1P0C2W7 299 aaPredicted RBP18.44■□□□□ 0.54
NCKIPSD-205ENST00000426678 CASP7P55210 303 aa18.44■□□□□ 0.54
NCKIPSD-205ENST00000426678 ALDH1L2Q3SY69 923 aa18.44■□□□□ 0.54
NCKIPSD-205ENST00000426678 TRMT2AQ8IZ69 625 aaKnown RBP18.44■□□□□ 0.54
NCKIPSD-205ENST00000426678 BCL2L13Q9BXK5 485 aa18.44■□□□□ 0.54
NCKIPSD-205ENST00000426678 GREM2Q9H772 168 aa18.44■□□□□ 0.54
NCKIPSD-205ENST00000426678 ANKIB1Q9P2G1 1089 aa18.44■□□□□ 0.54
NCKIPSD-205ENST00000426678 ZNRF3Q9ULT6 936 aa18.44■□□□□ 0.54
NCKIPSD-205ENST00000426678 ALDH1L1O75891 902 aa18.43■□□□□ 0.54
NCKIPSD-205ENST00000426678 WASHC4Q2M389 1173 aa18.43■□□□□ 0.54
NCKIPSD-205ENST00000426678 EYA3Q99504 573 aa18.43■□□□□ 0.54
NCKIPSD-205ENST00000426678 SRCIN1Q9C0H9 1055 aa18.43■□□□□ 0.54
NCKIPSD-205ENST00000426678 SMC4Q9NTJ3 1288 aa18.43■□□□□ 0.54
NCKIPSD-205ENST00000426678 HACL1Q9UJ83 578 aa18.43■□□□□ 0.54
NCKIPSD-205ENST00000426678 GRM8O00222 908 aa18.42■□□□□ 0.54
NCKIPSD-205ENST00000426678 TAF1DQ9H5J8 278 aaPredicted RBP18.42■□□□□ 0.54
NCKIPSD-205ENST00000426678 C9orf78Q9NZ63 289 aaPredicted RBP18.42■□□□□ 0.54
NCKIPSD-205ENST00000426678 POLLQ9UGP5 575 aa18.42■□□□□ 0.54
NCKIPSD-205ENST00000426678 UFL1O94874 794 aa18.41■□□□□ 0.54
NCKIPSD-205ENST00000426678 LMOD1P29536 600 aaPredicted RBP18.41■□□□□ 0.54
NCKIPSD-205ENST00000426678 IGHMBP2P38935 993 aaKnown RBP18.41■□□□□ 0.54
NCKIPSD-205ENST00000426678 HNRNPUQ00839 825 aaKnown RBP eCLIP18.41■□□□□ 0.54
NCKIPSD-205ENST00000426678 FAM161AQ3B820 660 aa18.41■□□□□ 0.54
NCKIPSD-205ENST00000426678 TBC1D16Q8TBP0 767 aa18.41■□□□□ 0.54
NCKIPSD-205ENST00000426678 PODXL2Q9NZ53 605 aa18.41■□□□□ 0.54
NCKIPSD-205ENST00000426678 GGA1Q9UJY5 639 aa18.41■□□□□ 0.54
NCKIPSD-205ENST00000426678 RIMBP2O15034 1052 aa18.4■□□□□ 0.54
NCKIPSD-205ENST00000426678 ITGA6P23229 1130 aa18.4■□□□□ 0.54
NCKIPSD-205ENST00000426678 EPHX2P34913 555 aa18.4■□□□□ 0.54
NCKIPSD-205ENST00000426678 APLP1P51693 650 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms