RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 TLR7Q9NYK1 1049 aaKnown RBP15.96■□□□□ 0.15
USP42-203ENST00000426246 ISY1Q9ULR0 285 aaKnown RBP15.96■□□□□ 0.15
USP42-203ENST00000426246 MYD88Q99836 296 aa15.95■□□□□ 0.14
USP42-203ENST00000426246 LIMCH1Q9UPQ0 1083 aa15.95■□□□□ 0.14
USP42-203ENST00000426246 EVA1CP58658 441 aa15.95■□□□□ 0.14
USP42-203ENST00000426246 CCT2P78371 535 aaKnown RBP15.95■□□□□ 0.14
USP42-203ENST00000426246 HSP90AB3PQ58FF7 597 aa15.95■□□□□ 0.14
USP42-203ENST00000426246 BEND3Q5T5X7 828 aa15.95■□□□□ 0.14
USP42-203ENST00000426246 DDX46Q7L014 1031 aaKnown RBP15.95■□□□□ 0.14
USP42-203ENST00000426246 LRP6O75581 1613 aa15.95■□□□□ 0.14
USP42-203ENST00000426246 PHF14O94880 888 aa15.95■□□□□ 0.14
USP42-203ENST00000426246 FAM184AQ8NB25 1140 aa15.94■□□□□ 0.14
USP42-203ENST00000426246 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.94■□□□□ 0.14
USP42-203ENST00000426246 ERVV-2B6SEH9 535 aa15.94■□□□□ 0.14
USP42-203ENST00000426246 BRD1O95696 1058 aa15.94■□□□□ 0.14
USP42-203ENST00000426246 RUFY2Q8WXA3 655 aa15.94■□□□□ 0.14
USP42-203ENST00000426246 RUFY3Q7L099 469 aa15.94■□□□□ 0.14
USP42-203ENST00000426246 SNRKQ9NRH2 765 aa15.94■□□□□ 0.14
USP42-203ENST00000426246 MCM2P49736 904 aa15.93■□□□□ 0.14
USP42-203ENST00000426246 ZNF445P59923 1031 aa15.93■□□□□ 0.14
USP42-203ENST00000426246 CHMP4AQ9BY43 222 aa15.93■□□□□ 0.14
USP42-203ENST00000426246 TRIM5Q9C035 493 aa15.93■□□□□ 0.14
USP42-203ENST00000426246 ZKSCAN5Q9Y2L8 839 aa15.93■□□□□ 0.14
USP42-203ENST00000426246 RBM8AQ9Y5S9 174 aaKnown RBP15.93■□□□□ 0.14
USP42-203ENST00000426246 SPDYE4A6NLX3 237 aa15.93■□□□□ 0.14
USP42-203ENST00000426246 NMIQ13287 307 aaPredicted RBP15.93■□□□□ 0.14
USP42-203ENST00000426246 CHMP4CQ96CF2 233 aa15.93■□□□□ 0.14
USP42-203ENST00000426246 SEC62Q99442 399 aaKnown RBP15.93■□□□□ 0.14
USP42-203ENST00000426246 DDX21Q9NR30 783 aaKnown RBP eCLIP15.93■□□□□ 0.14
USP42-203ENST00000426246 ARFGEF2Q9Y6D5 1785 aa15.93■□□□□ 0.14
USP42-203ENST00000426246 ZSCAN22P10073 491 aaPredicted RBP15.93■□□□□ 0.14
USP42-203ENST00000426246 CABP4P57796 275 aa15.93■□□□□ 0.14
USP42-203ENST00000426246 SLIT2O94813 1529 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 GORABQ5T7V8 394 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 UBE3BQ7Z3V4 1068 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 USP16Q9Y5T5 823 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 TAF6LQ9Y6J9 622 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 RRP9O43818 475 aaKnown RBP15.92■□□□□ 0.14
USP42-203ENST00000426246 CBX1P83916 185 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 NEXNQ0ZGT2 675 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 ISM2Q6H9L7 571 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 LUZP1Q86V48 1076 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 NUP188Q5SRE5 1749 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.92■□□□□ 0.14
USP42-203ENST00000426246 TUBGCP6Q96RT7 1819 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 BLOC1S2Q6QNY1 142 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 BICC1Q9H694 974 aaKnown RBP15.92■□□□□ 0.14
USP42-203ENST00000426246 ECHDC1Q9NTX5 307 aa15.92■□□□□ 0.14
USP42-203ENST00000426246 OFD1O75665 1012 aa15.91■□□□□ 0.14
USP42-203ENST00000426246 SGSM2O43147 1006 aa15.91■□□□□ 0.14
USP42-203ENST00000426246 GLRX3O76003 335 aaKnown RBP15.91■□□□□ 0.14
USP42-203ENST00000426246 HYPKQ9NX55 129 aa15.91■□□□□ 0.14
USP42-203ENST00000426246 TOM1O60784 492 aa15.9■□□□□ 0.14
USP42-203ENST00000426246 HAND2P61296 217 aa15.9■□□□□ 0.14
USP42-203ENST00000426246 FILIP1Q7Z7B0 1213 aa15.9■□□□□ 0.14
USP42-203ENST00000426246 SYTL4Q96C24 671 aaPredicted RBP15.9■□□□□ 0.14
USP42-203ENST00000426246 PKNOX2Q96KN3 472 aa15.9■□□□□ 0.14
USP42-203ENST00000426246 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.9■□□□□ 0.14
USP42-203ENST00000426246 IBTKQ9P2D0 1353 aaPredicted RBP15.9■□□□□ 0.14
USP42-203ENST00000426246 SNRPA1P09661 255 aaKnown RBP15.9■□□□□ 0.14
USP42-203ENST00000426246 COPS6Q7L5N1 327 aa15.9■□□□□ 0.14
USP42-203ENST00000426246 PPP1R9BQ96SB3 815 aa15.9■□□□□ 0.14
USP42-203ENST00000426246 JAK2O60674 1132 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 TPM2P07951 284 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 ME3Q16798 604 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 KSR2Q6VAB6 950 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 CDC37L1Q7L3B6 337 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 C16orf45Q96MC5 204 aaPredicted RBP15.89■□□□□ 0.13
USP42-203ENST00000426246 F13A1P00488 732 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 TTC5Q8N0Z6 440 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 ZHX1Q9UKY1 873 aaPredicted RBP15.89■□□□□ 0.13
USP42-203ENST00000426246 FKBP4Q02790 459 aaKnown RBP eCLIP15.89■□□□□ 0.13
USP42-203ENST00000426246 ZRSR1Q15695 479 aaKnown RBP15.89■□□□□ 0.13
USP42-203ENST00000426246 SUCLG2Q96I99 432 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 SPATA32Q96LK8 384 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 TNMDQ9H2S6 317 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 DACT1Q9NYF0 836 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 NOL7Q9UMY1 257 aaKnown RBP15.89■□□□□ 0.13
USP42-203ENST00000426246 ATP6V1DQ9Y5K8 247 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 DOT1LQ8TEK3 1739 aa15.89■□□□□ 0.13
USP42-203ENST00000426246 PIP4K2BP78356 416 aa15.88■□□□□ 0.13
USP42-203ENST00000426246 EAF2Q96CJ1 260 aaPredicted RBP15.88■□□□□ 0.13
USP42-203ENST00000426246 CYP2E1P05181 493 aaPredicted RBP15.88■□□□□ 0.13
USP42-203ENST00000426246 HSPA4P34932 840 aa15.88■□□□□ 0.13
USP42-203ENST00000426246 CCDC183Q5T5S1 534 aa15.88■□□□□ 0.13
USP42-203ENST00000426246 XAGE3Q8WTP9 111 aa15.88■□□□□ 0.13
USP42-203ENST00000426246 A0A0D9SFI3 127 aa15.88■□□□□ 0.13
USP42-203ENST00000426246 CHAF1AQ13111 956 aaPredicted RBP15.88■□□□□ 0.13
USP42-203ENST00000426246 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.88■□□□□ 0.13
USP42-203ENST00000426246 V9GYY5 206 aaPredicted RBP15.88■□□□□ 0.13
USP42-203ENST00000426246 SPATA31A1Q5TZJ5 1347 aa15.88■□□□□ 0.13
USP42-203ENST00000426246 WASHC4Q2M389 1173 aa15.87■□□□□ 0.13
USP42-203ENST00000426246 FTOQ9C0B1 505 aaKnown RBP eCLIP15.87■□□□□ 0.13
USP42-203ENST00000426246 LIG1P18858 919 aa15.87■□□□□ 0.13
USP42-203ENST00000426246 ZBTB3Q9H5J0 574 aa15.87■□□□□ 0.13
USP42-203ENST00000426246 AFDNP55196 1824 aaKnown RBP15.86■□□□□ 0.13
USP42-203ENST00000426246 ADAMTS2O95450 1211 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 HSP90AB4PQ58FF6 505 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 BRF1Q92994 677 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 TPCN1Q9ULQ1 816 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms