RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 LNPKQ9C0E8 428 aa19.57■□□□□ 0.72
SCRN1-205ENST00000425819 SIL1Q9H173 461 aa19.57■□□□□ 0.72
SCRN1-205ENST00000425819 NOP58Q9Y2X3 529 aaKnown RBP19.57■□□□□ 0.72
SCRN1-205ENST00000425819 POLRMTO00411 1230 aaKnown RBP19.56■□□□□ 0.72
SCRN1-205ENST00000425819 SMARCA5O60264 1052 aaPredicted RBP19.56■□□□□ 0.72
SCRN1-205ENST00000425819 PTPN12Q05209 780 aaKnown RBP19.56■□□□□ 0.72
SCRN1-205ENST00000425819 OS9Q13438 667 aaPredicted RBP19.56■□□□□ 0.72
SCRN1-205ENST00000425819 CHD1LQ86WJ1 897 aa19.56■□□□□ 0.72
SCRN1-205ENST00000425819 GREM2Q9H772 168 aa19.56■□□□□ 0.72
SCRN1-205ENST00000425819 RGS3P49796 1198 aa19.55■□□□□ 0.72
SCRN1-205ENST00000425819 CCDC57Q2TAC2 916 aa19.55■□□□□ 0.72
SCRN1-205ENST00000425819 SLC10A5Q5PT55 438 aa19.55■□□□□ 0.72
SCRN1-205ENST00000425819 C3orf67Q6ZVT6 689 aa19.55■□□□□ 0.72
SCRN1-205ENST00000425819 ILDR2Q71H61 639 aa19.55■□□□□ 0.72
SCRN1-205ENST00000425819 ZNF594Q96JF6 807 aaPredicted RBP19.55■□□□□ 0.72
SCRN1-205ENST00000425819 PDGFDQ9GZP0 370 aaPredicted RBP19.55■□□□□ 0.72
SCRN1-205ENST00000425819 COPRSQ9NQ92 184 aa19.55■□□□□ 0.72
SCRN1-205ENST00000425819 ZBTB47Q9UFB7 747 aaPredicted RBP19.55■□□□□ 0.72
SCRN1-205ENST00000425819 G3BP1Q13283 466 aaKnown RBP eCLIP19.54■□□□□ 0.722e-7■■■□□ 14.6
SCRN1-205ENST00000425819 IFIT5Q13325 482 aaKnown RBP19.54■□□□□ 0.72
SCRN1-205ENST00000425819 HSP90AB4PQ58FF6 505 aa19.54■□□□□ 0.72
SCRN1-205ENST00000425819 PRR5LQ6MZQ0 368 aa19.54■□□□□ 0.72
SCRN1-205ENST00000425819 DDX60Q8IY21 1712 aaKnown RBP19.54■□□□□ 0.72
SCRN1-205ENST00000425819 RAB11FIP3O75154 756 aa19.53■□□□□ 0.72
SCRN1-205ENST00000425819 MMP10P09238 476 aa19.53■□□□□ 0.72
SCRN1-205ENST00000425819 ITGA6P23229 1130 aa19.53■□□□□ 0.72
SCRN1-205ENST00000425819 LRRCC1Q9C099 1032 aa19.53■□□□□ 0.72
SCRN1-205ENST00000425819 QSER1Q2KHR3 1735 aa19.53■□□□□ 0.72
SCRN1-205ENST00000425819 ANKRD18BA2A2Z9 1011 aa19.53■□□□□ 0.72
SCRN1-205ENST00000425819 PDE4AP27815 886 aa19.53■□□□□ 0.72
SCRN1-205ENST00000425819 CCDC152Q4G0S7 254 aa19.53■□□□□ 0.72
SCRN1-205ENST00000425819 TAF7LQ5H9L4 462 aa19.53■□□□□ 0.72
SCRN1-205ENST00000425819 ST5P78524 1137 aa19.52■□□□□ 0.71
SCRN1-205ENST00000425819 RHPN1Q8TCX5 695 aa19.52■□□□□ 0.71
SCRN1-205ENST00000425819 NLRP3Q96P20 1036 aa19.52■□□□□ 0.71
SCRN1-205ENST00000425819 LAMB2P55268 1798 aa19.51■□□□□ 0.71
SCRN1-205ENST00000425819 KIF1BPQ96EK5 621 aa19.51■□□□□ 0.71
SCRN1-205ENST00000425819 IL1RAPL2Q9NP60 686 aa19.51■□□□□ 0.71
SCRN1-205ENST00000425819 PARP3Q9Y6F1 533 aa19.51■□□□□ 0.71
SCRN1-205ENST00000425819 SF3B3Q15393 1217 aaKnown RBP19.5■□□□□ 0.71
SCRN1-205ENST00000425819 ERC1Q8IUD2 1116 aa19.5■□□□□ 0.71
SCRN1-205ENST00000425819 SEC31BQ9NQW1 1179 aa19.5■□□□□ 0.71
SCRN1-205ENST00000425819 MYH3P11055 1940 aa19.5■□□□□ 0.71
SCRN1-205ENST00000425819 SASH1O94885 1247 aa19.49■□□□□ 0.71
SCRN1-205ENST00000425819 C16orf71Q8IYS4 520 aaPredicted RBP19.49■□□□□ 0.71
SCRN1-205ENST00000425819 PUS3Q9BZE2 481 aaKnown RBP19.49■□□□□ 0.71
SCRN1-205ENST00000425819 EYA2O00167 538 aa19.49■□□□□ 0.71
SCRN1-205ENST00000425819 LRRC24Q50LG9 513 aa19.49■□□□□ 0.71
SCRN1-205ENST00000425819 RTL9Q8NET4 1388 aa19.48■□□□□ 0.71
SCRN1-205ENST00000425819 R3HDM1Q15032 1099 aaKnown RBP19.48■□□□□ 0.71
SCRN1-205ENST00000425819 ATG9AQ7Z3C6 839 aa19.48■□□□□ 0.71
SCRN1-205ENST00000425819 OTUD7AQ8TE49 926 aaPredicted RBP19.47■□□□□ 0.71
SCRN1-205ENST00000425819 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.47■□□□□ 0.71
SCRN1-205ENST00000425819 TNRC6CQ9HCJ0 1690 aaKnown RBP19.47■□□□□ 0.71
SCRN1-205ENST00000425819 CIAO1O76071 339 aa19.46■□□□□ 0.71
SCRN1-205ENST00000425819 IL15P40933 162 aaPredicted RBP19.46■□□□□ 0.71
SCRN1-205ENST00000425819 TFCP2Q12800 502 aa19.46■□□□□ 0.71
SCRN1-205ENST00000425819 LDHAL6AQ6ZMR3 332 aa19.46■□□□□ 0.71
SCRN1-205ENST00000425819 SLC16A10Q8TF71 515 aa19.46■□□□□ 0.71
SCRN1-205ENST00000425819 RIC1Q4ADV7 1423 aa19.46■□□□□ 0.7
SCRN1-205ENST00000425819 CNNM1Q9NRU3 951 aa19.45■□□□□ 0.7
SCRN1-205ENST00000425819 IGHMBP2P38935 993 aaKnown RBP19.44■□□□□ 0.7
SCRN1-205ENST00000425819 CLASRPQ8N2M8 674 aaKnown RBP19.44■□□□□ 0.7
SCRN1-205ENST00000425819 CDC5LQ99459 802 aaKnown RBP19.44■□□□□ 0.7
SCRN1-205ENST00000425819 FBXO3Q9UK99 471 aa19.44■□□□□ 0.7
SCRN1-205ENST00000425819 ZBTB7AO95365 584 aa19.44■□□□□ 0.7
SCRN1-205ENST00000425819 DDX46Q7L014 1031 aaKnown RBP19.44■□□□□ 0.7
SCRN1-205ENST00000425819 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
SCRN1-205ENST00000425819 MPHOSPH8Q99549 860 aa19.44■□□□□ 0.7
SCRN1-205ENST00000425819 PSDA5PKW4 1024 aaPredicted RBP19.43■□□□□ 0.7
SCRN1-205ENST00000425819 AACSQ86V21 672 aa19.43■□□□□ 0.7
SCRN1-205ENST00000425819 ANKRD18AQ8IVF6 992 aa19.43■□□□□ 0.7
SCRN1-205ENST00000425819 PLEKHM2Q8IWE5 1019 aa19.43■□□□□ 0.7
SCRN1-205ENST00000425819 CELF1Q92879 486 aaKnown RBP19.43■□□□□ 0.7
SCRN1-205ENST00000425819 BRIP1Q9BX63 1249 aa19.43■□□□□ 0.7
SCRN1-205ENST00000425819 RIPOR2Q9Y4F9 1068 aa19.43■□□□□ 0.7
SCRN1-205ENST00000425819 NRXN2Q9P2S2 1712 aa19.43■□□□□ 0.7
SCRN1-205ENST00000425819 COL4A1P02462 1669 aa19.42■□□□□ 0.7
SCRN1-205ENST00000425819 RPGRQ92834 1020 aaKnown RBP19.42■□□□□ 0.7
SCRN1-205ENST00000425819 CEP126Q9P2H0 1117 aa19.42■□□□□ 0.7
SCRN1-205ENST00000425819 CRY2Q49AN0 593 aa19.41■□□□□ 0.7
SCRN1-205ENST00000425819 METTL24Q5JXM2 366 aa19.41■□□□□ 0.7
SCRN1-205ENST00000425819 EAF2Q96CJ1 260 aaPredicted RBP19.41■□□□□ 0.7
SCRN1-205ENST00000425819 LRP5O75197 1615 aa19.41■□□□□ 0.7
SCRN1-205ENST00000425819 IFIT2P09913 472 aaKnown RBP19.4■□□□□ 0.7
SCRN1-205ENST00000425819 TNNI3KQ59H18 835 aa19.4■□□□□ 0.7
SCRN1-205ENST00000425819 CASZ1Q86V15 1759 aa19.4■□□□□ 0.7
SCRN1-205ENST00000425819 CCDC8Q9H0W5 538 aaPredicted RBP19.4■□□□□ 0.7
SCRN1-205ENST00000425819 ATF5Q9Y2D1 282 aaPredicted RBP19.4■□□□□ 0.7
SCRN1-205ENST00000425819 FPGT-TNNI3KV9GXZ4 949 aa19.4■□□□□ 0.7
SCRN1-205ENST00000425819 SALL3Q9BXA9 1300 aa19.4■□□□□ 0.7
SCRN1-205ENST00000425819 KLRG2A4D1S0 409 aaPredicted RBP19.4■□□□□ 0.7
SCRN1-205ENST00000425819 MX1P20591 662 aa19.4■□□□□ 0.7
SCRN1-205ENST00000425819 RPS8P62241 208 aaKnown RBP19.4■□□□□ 0.7
SCRN1-205ENST00000425819 TSHZ3Q63HK5 1081 aa19.4■□□□□ 0.7
SCRN1-205ENST00000425819 PDE6BP35913 854 aa19.39■□□□□ 0.69
SCRN1-205ENST00000425819 PDE1AP54750 535 aa19.39■□□□□ 0.69
SCRN1-205ENST00000425819 HELBQ8NG08 1087 aaPredicted RBP19.39■□□□□ 0.69
SCRN1-205ENST00000425819 RBM17Q96I25 401 aaKnown RBP19.39■□□□□ 0.69
SCRN1-205ENST00000425819 MTFR1LQ9H019 292 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms