RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 IFIT5Q13325 482 aaKnown RBP32.22■■■□□ 2.75
LDB1-202ENST00000425280 SEPT12Q8IYM1 358 aa32.22■■■□□ 2.75
LDB1-202ENST00000425280 CNTNAP4Q9C0A0 1308 aa32.21■■■□□ 2.75
LDB1-202ENST00000425280 FBXO3Q9UK99 471 aa32.21■■■□□ 2.75
LDB1-202ENST00000425280 SUSD4Q5VX71 490 aa32.2■■■□□ 2.75
LDB1-202ENST00000425280 SBF2Q86WG5 1849 aa32.2■■■□□ 2.75
LDB1-202ENST00000425280 CD2BP2O95400 341 aaKnown RBP32.2■■■□□ 2.74
LDB1-202ENST00000425280 BCORQ6W2J9 1755 aa32.19■■■□□ 2.74
LDB1-202ENST00000425280 PDE8AO60658 829 aa32.19■■■□□ 2.74
LDB1-202ENST00000425280 DIAPH3Q9NSV4 1193 aa32.19■■■□□ 2.74
LDB1-202ENST00000425280 SLKQ9H2G2 1235 aaPredicted RBP32.19■■■□□ 2.74
LDB1-202ENST00000425280 GREM2Q9H772 168 aa32.19■■■□□ 2.74
LDB1-202ENST00000425280 QTRT2Q9H974 415 aaKnown RBP32.19■■■□□ 2.74
LDB1-202ENST00000425280 CWC27Q6UX04 472 aaKnown RBP32.18■■■□□ 2.74
LDB1-202ENST00000425280 ZNF609O15014 1411 aa32.18■■■□□ 2.74
LDB1-202ENST00000425280 EPB41L2O43491 1005 aaKnown RBP32.17■■■□□ 2.74
LDB1-202ENST00000425280 PARP10Q53GL7 1025 aa32.17■■■□□ 2.74
LDB1-202ENST00000425280 TAF7LQ5H9L4 462 aa32.17■■■□□ 2.74
LDB1-202ENST00000425280 ANTXR1Q9H6X2 564 aa32.17■■■□□ 2.74
LDB1-202ENST00000425280 ITGA6P23229 1130 aa32.16■■■□□ 2.74
LDB1-202ENST00000425280 UTP14AQ9BVJ6 771 aaKnown RBP32.16■■■□□ 2.74
LDB1-202ENST00000425280 MCCP23508 829 aa32.15■■■□□ 2.74
LDB1-202ENST00000425280 NBR1Q14596 966 aa32.15■■■□□ 2.74
LDB1-202ENST00000425280 SPRYD3Q8NCJ5 442 aa32.15■■■□□ 2.74
LDB1-202ENST00000425280 AK7Q96M32 723 aa32.15■■■□□ 2.74
LDB1-202ENST00000425280 NEUROD6Q96NK8 337 aa32.15■■■□□ 2.74
LDB1-202ENST00000425280 CEP126Q9P2H0 1117 aa32.15■■■□□ 2.74
LDB1-202ENST00000425280 SH3TC1Q8TE82 1336 aa32.15■■■□□ 2.74
LDB1-202ENST00000425280 TIMM10P62072 90 aa32.15■■■□□ 2.74
LDB1-202ENST00000425280 RC3H1Q5TC82 1133 aaKnown RBP32.15■■■□□ 2.74
LDB1-202ENST00000425280 RUFY2Q8WXA3 655 aa32.15■■■□□ 2.74
LDB1-202ENST00000425280 NIP7Q9Y221 180 aaKnown RBP eCLIP32.15■■■□□ 2.74
LDB1-202ENST00000425280 ZNF652Q9Y2D9 606 aa32.14■■■□□ 2.74
LDB1-202ENST00000425280 ANKRD18BA2A2Z9 1011 aa32.14■■■□□ 2.74
LDB1-202ENST00000425280 LY75O60449 1722 aa32.13■■■□□ 2.73
LDB1-202ENST00000425280 FAM177BA6PVY3 158 aa32.13■■■□□ 2.73
LDB1-202ENST00000425280 LSG1Q9H089 658 aaKnown RBP32.13■■■□□ 2.73
LDB1-202ENST00000425280 CCNL1Q9UK58 526 aaPredicted RBP32.13■■■□□ 2.73
LDB1-202ENST00000425280 HIP1O00291 1037 aa32.12■■■□□ 2.73
LDB1-202ENST00000425280 CLEC4GQ6UXB4 293 aa32.12■■■□□ 2.73
LDB1-202ENST00000425280 A0A1B0GUL7 405 aa32.12■■■□□ 2.73
LDB1-202ENST00000425280 HAUS7Q99871 368 aa32.12■■■□□ 2.73
LDB1-202ENST00000425280 FSD1Q9BTV5 496 aa32.12■■■□□ 2.73
LDB1-202ENST00000425280 PALD1Q9ULE6 856 aa32.12■■■□□ 2.73
LDB1-202ENST00000425280 RAD50Q92878 1312 aa32.11■■■□□ 2.73
LDB1-202ENST00000425280 K7ELQ4 463 aaPredicted RBP32.11■■■□□ 2.73
LDB1-202ENST00000425280 NTSR2O95665 410 aa32.11■■■□□ 2.73
LDB1-202ENST00000425280 EDC3Q96F86 508 aaKnown RBP32.11■■■□□ 2.73
LDB1-202ENST00000425280 HCLS1P14317 486 aaPredicted RBP32.11■■■□□ 2.73
LDB1-202ENST00000425280 ANAPC15P60006 121 aa32.11■■■□□ 2.73
LDB1-202ENST00000425280 RIPOR2Q9Y4F9 1068 aa32.11■■■□□ 2.73
LDB1-202ENST00000425280 RIC1Q4ADV7 1423 aa32.1■■■□□ 2.73
LDB1-202ENST00000425280 RPS6KA4O75676 772 aa32.09■■■□□ 2.73
LDB1-202ENST00000425280 IL17RAQ96F46 866 aa32.09■■■□□ 2.73
LDB1-202ENST00000425280 DDX60Q8IY21 1712 aaKnown RBP32.09■■■□□ 2.73
LDB1-202ENST00000425280 NMIQ13287 307 aaPredicted RBP32.09■■■□□ 2.73
LDB1-202ENST00000425280 LDHAL6AQ6ZMR3 332 aa32.09■■■□□ 2.73
LDB1-202ENST00000425280 KIAA1211Q6ZU35 1233 aa32.09■■■□□ 2.73
LDB1-202ENST00000425280 AKAP2Q9Y2D5 859 aa32.09■■■□□ 2.73
LDB1-202ENST00000425280 SCN7AQ01118 1682 aa32.08■■■□□ 2.73
LDB1-202ENST00000425280 HSPA4P34932 840 aa32.08■■■□□ 2.73
LDB1-202ENST00000425280 SMIM5Q71RC9 77 aa32.08■■■□□ 2.73
LDB1-202ENST00000425280 FAM227BQ96M60 508 aa32.08■■■□□ 2.73
LDB1-202ENST00000425280 NDUFB9Q9Y6M9 179 aa32.08■■■□□ 2.73
LDB1-202ENST00000425280 TAF1LQ8IZX4 1826 aa32.08■■■□□ 2.73
LDB1-202ENST00000425280 DNAJC2Q99543 621 aaKnown RBP32.07■■■□□ 2.73
LDB1-202ENST00000425280 LAMB2P55268 1798 aa32.07■■■□□ 2.72
LDB1-202ENST00000425280 RGL2O15211 777 aa32.06■■■□□ 2.72
LDB1-202ENST00000425280 BCL11BQ9C0K0 894 aaPredicted RBP32.06■■■□□ 2.72
LDB1-202ENST00000425280 LRP5O75197 1615 aa32.05■■■□□ 2.72
LDB1-202ENST00000425280 GNPATO15228 680 aa32.05■■■□□ 2.72
LDB1-202ENST00000425280 CNNM1Q9NRU3 951 aa32.05■■■□□ 2.72
LDB1-202ENST00000425280 ST18O60284 1047 aa32.04■■■□□ 2.72
LDB1-202ENST00000425280 METTL24Q5JXM2 366 aa32.04■■■□□ 2.72
LDB1-202ENST00000425280 SNRKQ9NRH2 765 aa32.04■■■□□ 2.72
LDB1-202ENST00000425280 A0A0D9SFI3 127 aa32.04■■■□□ 2.72
LDB1-202ENST00000425280 BCL2L12Q9HB09 334 aa32.04■■■□□ 2.72
LDB1-202ENST00000425280 RFX7Q2KHR2 1363 aa32.03■■■□□ 2.72
LDB1-202ENST00000425280 NARFQ9UHQ1 456 aa32.03■■■□□ 2.72
LDB1-202ENST00000425280 HSP90B1P14625 803 aaKnown RBP32.03■■■□□ 2.72
LDB1-202ENST00000425280 ADORA1P30542 326 aa32.03■■■□□ 2.72
LDB1-202ENST00000425280 PTH1RQ03431 593 aa32.03■■■□□ 2.72
LDB1-202ENST00000425280 XAGE2Q96GT9 111 aa32.03■■■□□ 2.72
LDB1-202ENST00000425280 BRWD3Q6RI45 1802 aa32.02■■■□□ 2.72
LDB1-202ENST00000425280 VGLL2Q8N8G2 317 aa32.01■■■□□ 2.72
LDB1-202ENST00000425280 DDX46Q7L014 1031 aaKnown RBP32.01■■■□□ 2.71
LDB1-202ENST00000425280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.01■■■□□ 2.71
LDB1-202ENST00000425280 RTCBQ9Y3I0 505 aaKnown RBP32.01■■■□□ 2.71
LDB1-202ENST00000425280 NFKBIBQ15653 356 aa32■■■□□ 2.71
LDB1-202ENST00000425280 USPL1Q5W0Q7 1092 aa32■■■□□ 2.71
LDB1-202ENST00000425280 SRP68Q9UHB9 627 aaKnown RBP32■■■□□ 2.71
LDB1-202ENST00000425280 C4BP0C0L5 1744 aa32■■■□□ 2.71
LDB1-202ENST00000425280 IFIT1P09914 478 aaKnown RBP31.99■■■□□ 2.71
LDB1-202ENST00000425280 DDIT3P35638 169 aa31.99■■■□□ 2.71
LDB1-202ENST00000425280 NEK4P51957 841 aa31.99■■■□□ 2.71
LDB1-202ENST00000425280 ATP2B3Q16720 1220 aa31.99■■■□□ 2.71
LDB1-202ENST00000425280 AMIGO3Q86WK7 504 aa31.99■■■□□ 2.71
LDB1-202ENST00000425280 KBTBD3Q8NAB2 608 aa31.99■■■□□ 2.71
LDB1-202ENST00000425280 PAG1Q9NWQ8 432 aa31.99■■■□□ 2.71
LDB1-202ENST00000425280 CCDC171Q6TFL3 1326 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms