RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 DPP8Q6V1X1 898 aaPredicted RBP22.15■■□□□ 1.14
CHCHD3-202ENST00000423635 MPNDQ8N594 471 aa22.15■■□□□ 1.14
CHCHD3-202ENST00000423635 NEFMP07197 916 aa22.14■■□□□ 1.14
CHCHD3-202ENST00000423635 PDIA6Q15084 440 aa22.14■■□□□ 1.14
CHCHD3-202ENST00000423635 PLEKHF1Q96S99 279 aa22.14■■□□□ 1.14
CHCHD3-202ENST00000423635 CASP8AP2Q9UKL3 1982 aa22.14■■□□□ 1.13
CHCHD3-202ENST00000423635 NOGQ13253 232 aa22.13■■□□□ 1.13
CHCHD3-202ENST00000423635 BCL2L13Q9BXK5 485 aa22.13■■□□□ 1.13
CHCHD3-202ENST00000423635 CNOT7Q9UIV1 285 aaKnown RBP22.13■■□□□ 1.13
CHCHD3-202ENST00000423635 RAD17O75943 681 aa22.12■■□□□ 1.13
CHCHD3-202ENST00000423635 DGKZQ13574 1117 aa22.12■■□□□ 1.13
CHCHD3-202ENST00000423635 TRPM4Q8TD43 1214 aa22.12■■□□□ 1.13
CHCHD3-202ENST00000423635 ZNF408Q9H9D4 720 aa22.12■■□□□ 1.13
CHCHD3-202ENST00000423635 DLG5Q8TDM6 1919 aa22.11■■□□□ 1.13
CHCHD3-202ENST00000423635 NFE2L2Q16236 605 aa22.1■■□□□ 1.13
CHCHD3-202ENST00000423635 CFAP44Q96MT7 982 aa22.1■■□□□ 1.13
CHCHD3-202ENST00000423635 ZIC5Q96T25 663 aa22.1■■□□□ 1.13
CHCHD3-202ENST00000423635 THUMPD2Q9BTF0 503 aaKnown RBP22.1■■□□□ 1.13
CHCHD3-202ENST00000423635 YDJCA8MPS7 323 aa22.09■■□□□ 1.13
CHCHD3-202ENST00000423635 H7C1D1 291 aa22.09■■□□□ 1.13
CHCHD3-202ENST00000423635 DPF2Q92785 391 aa22.09■■□□□ 1.13
CHCHD3-202ENST00000423635 GRAPQ13588 217 aa22.08■■□□□ 1.13
CHCHD3-202ENST00000423635 DDX46Q7L014 1031 aaKnown RBP22.08■■□□□ 1.13
CHCHD3-202ENST00000423635 USP48Q86UV5 1035 aa22.08■■□□□ 1.13
CHCHD3-202ENST00000423635 GRAPLQ8TC17 118 aaPredicted RBP22.08■■□□□ 1.13
CHCHD3-202ENST00000423635 SHTN1A0MZ66 631 aa22.07■■□□□ 1.12
CHCHD3-202ENST00000423635 HUNKP57058 714 aa22.07■■□□□ 1.12
CHCHD3-202ENST00000423635 HSP90AB3PQ58FF7 597 aa22.07■■□□□ 1.12
CHCHD3-202ENST00000423635 TMC4Q7Z404 712 aa22.07■■□□□ 1.12
CHCHD3-202ENST00000423635 NLRP10Q86W26 655 aa22.07■■□□□ 1.12
CHCHD3-202ENST00000423635 TNRC18O15417 2968 aaPredicted RBP22.07■■□□□ 1.12
CHCHD3-202ENST00000423635 FAM155AB1AL88 458 aaPredicted RBP22.06■■□□□ 1.12
CHCHD3-202ENST00000423635 HCLS1P14317 486 aaPredicted RBP22.06■■□□□ 1.12
CHCHD3-202ENST00000423635 MICALL2Q8IY33 904 aa22.06■■□□□ 1.12
CHCHD3-202ENST00000423635 ANKRD36CQ5JPF3 1778 aa22.06■■□□□ 1.12
CHCHD3-202ENST00000423635 EIF2S2P20042 333 aaKnown RBP22.06■■□□□ 1.12
CHCHD3-202ENST00000423635 PROSER3Q2NL68 480 aa22.06■■□□□ 1.12
CHCHD3-202ENST00000423635 RGMBQ6NW40 437 aa22.06■■□□□ 1.12
CHCHD3-202ENST00000423635 SAGE1Q9NXZ1 904 aa22.06■■□□□ 1.12
CHCHD3-202ENST00000423635 TCIRG1Q13488 830 aa22.05■■□□□ 1.12
CHCHD3-202ENST00000423635 DLK2Q6UY11 383 aa22.05■■□□□ 1.12
CHCHD3-202ENST00000423635 CCDC102AQ96A19 550 aa22.05■■□□□ 1.12
CHCHD3-202ENST00000423635 PNNQ9H307 717 aaKnown RBP22.05■■□□□ 1.12
CHCHD3-202ENST00000423635 BABAM1Q9NWV8 329 aa22.05■■□□□ 1.12
CHCHD3-202ENST00000423635 TSPYL4Q9UJ04 414 aa22.05■■□□□ 1.12
CHCHD3-202ENST00000423635 ZBTB12Q9Y330 459 aaPredicted RBP22.05■■□□□ 1.12
CHCHD3-202ENST00000423635 SH3TC1Q8TE82 1336 aa22.04■■□□□ 1.12
CHCHD3-202ENST00000423635 COPS6Q7L5N1 327 aa22.04■■□□□ 1.12
CHCHD3-202ENST00000423635 SAMD7Q7Z3H4 446 aa22.04■■□□□ 1.12
CHCHD3-202ENST00000423635 TRMT112Q9UI30 125 aaKnown RBP22.04■■□□□ 1.12
CHCHD3-202ENST00000423635 LAMB2P55268 1798 aa22.03■■□□□ 1.12
CHCHD3-202ENST00000423635 PSMD14O00487 310 aa22.03■■□□□ 1.12
CHCHD3-202ENST00000423635 ANXA1P04083 346 aa22.03■■□□□ 1.12
CHCHD3-202ENST00000423635 WASHC4Q2M389 1173 aa22.03■■□□□ 1.12
CHCHD3-202ENST00000423635 GBA2Q9HCG7 927 aaPredicted RBP22.03■■□□□ 1.12
CHCHD3-202ENST00000423635 KRT26Q7Z3Y9 468 aa22.02■■□□□ 1.12
CHCHD3-202ENST00000423635 C2orf69Q8N8R5 385 aa22.02■■□□□ 1.12
CHCHD3-202ENST00000423635 DUOX1Q9NRD9 1551 aa22.01■■□□□ 1.11
CHCHD3-202ENST00000423635 RPS12P25398 132 aaKnown RBP22.01■■□□□ 1.11
CHCHD3-202ENST00000423635 KIF23Q02241 960 aaPredicted RBP22.01■■□□□ 1.11
CHCHD3-202ENST00000423635 EGFRP00533 1210 aa22■■□□□ 1.11
CHCHD3-202ENST00000423635 AIMP1Q12904 312 aaKnown RBP22■■□□□ 1.11
CHCHD3-202ENST00000423635 TBC1D10BQ4KMP7 808 aaPredicted RBP22■■□□□ 1.11
CHCHD3-202ENST00000423635 XAGE3Q8WTP9 111 aa22■■□□□ 1.11
CHCHD3-202ENST00000423635 RNF186Q9NXI6 227 aa22■■□□□ 1.11
CHCHD3-202ENST00000423635 DCPSQ96C86 337 aaKnown RBP21.99■■□□□ 1.11
CHCHD3-202ENST00000423635 NSFL1CQ9UNZ2 370 aaKnown RBP21.99■■□□□ 1.11
CHCHD3-202ENST00000423635 MAPK8IP3Q9UPT6 1336 aa21.98■■□□□ 1.11
CHCHD3-202ENST00000423635 PDE4DIPQ5VU43 2346 aa21.98■■□□□ 1.11
CHCHD3-202ENST00000423635 POLR2AP24928 1970 aaKnown RBP21.98■■□□□ 1.11
CHCHD3-202ENST00000423635 ZNF157P51786 506 aaPredicted RBP21.98■■□□□ 1.11
CHCHD3-202ENST00000423635 SF3B3Q15393 1217 aaKnown RBP21.98■■□□□ 1.11
CHCHD3-202ENST00000423635 DBNDD1Q9H9R9 158 aa21.98■■□□□ 1.11
CHCHD3-202ENST00000423635 POLLQ9UGP5 575 aa21.98■■□□□ 1.11
CHCHD3-202ENST00000423635 TAF1P21675 1872 aa21.97■■□□□ 1.11
CHCHD3-202ENST00000423635 LRRC37AA6NMS7 1700 aa21.97■■□□□ 1.11
CHCHD3-202ENST00000423635 TRPA1O75762 1119 aa21.97■■□□□ 1.11
CHCHD3-202ENST00000423635 CELF1Q92879 486 aaKnown RBP21.97■■□□□ 1.11
CHCHD3-202ENST00000423635 ADM5C9JUS6 153 aa21.96■■□□□ 1.11
CHCHD3-202ENST00000423635 RIPK4P57078 832 aa21.96■■□□□ 1.11
CHCHD3-202ENST00000423635 CSRNP1Q96S65 589 aa21.96■■□□□ 1.11
CHCHD3-202ENST00000423635 KCNQ5Q9NR82 932 aa21.96■■□□□ 1.11
CHCHD3-202ENST00000423635 RTL9Q8NET4 1388 aa21.95■■□□□ 1.1
CHCHD3-202ENST00000423635 RIMBP2O15034 1052 aa21.95■■□□□ 1.1
CHCHD3-202ENST00000423635 SLC10A3P09131 477 aa21.95■■□□□ 1.1
CHCHD3-202ENST00000423635 RBM26Q5T8P6 1007 aaKnown RBP21.95■■□□□ 1.1
CHCHD3-202ENST00000423635 REM2Q8IYK8 340 aaPredicted RBP21.95■■□□□ 1.1
CHCHD3-202ENST00000423635 EYA3Q99504 573 aa21.95■■□□□ 1.1
CHCHD3-202ENST00000423635 C6orf229H3BNL8 230 aa21.94■■□□□ 1.1
CHCHD3-202ENST00000423635 ECE2O60344 883 aa21.94■■□□□ 1.1
CHCHD3-202ENST00000423635 VIL1P09327 827 aaKnown RBP21.94■■□□□ 1.1
CHCHD3-202ENST00000423635 GPSM2P81274 684 aa21.94■■□□□ 1.1
CHCHD3-202ENST00000423635 NECTIN2Q92692 538 aa21.94■■□□□ 1.1
CHCHD3-202ENST00000423635 SOX10P56693 466 aa21.93■■□□□ 1.1
CHCHD3-202ENST00000423635 KIF4BQ2VIQ3 1234 aa21.93■■□□□ 1.1
CHCHD3-202ENST00000423635 ISCA1Q9BUE6 129 aa21.93■■□□□ 1.1
CHCHD3-202ENST00000423635 DOK7Q18PE1 504 aa21.92■■□□□ 1.1
CHCHD3-202ENST00000423635 SULF1Q8IWU6 871 aa21.92■■□□□ 1.1
CHCHD3-202ENST00000423635 PLBD2Q8NHP8 589 aa21.92■■□□□ 1.1
CHCHD3-202ENST00000423635 TBC1D16Q8TBP0 767 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms