RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 TIGD1Q96MW7 591 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 CASTP20810 708 aaKnown RBP12.67□□□□□ -0.38
SCN5A-205ENST00000423572 SMC1BQ8NDV3 1235 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 CSPG5O95196 566 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 DNA2P51530 1060 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 SETD1BQ9UPS6 1966 aaKnown RBP12.66□□□□□ -0.38
SCN5A-205ENST00000423572 VIMP08670 466 aaKnown RBP12.66□□□□□ -0.38
SCN5A-205ENST00000423572 IL1RAPL2Q9NP60 686 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 IRAK4Q9NWZ3 460 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 CD2APQ9Y5K6 639 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 RAB11FIP3O75154 756 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 MYCP01106 439 aaPredicted RBP12.66□□□□□ -0.38
SCN5A-205ENST00000423572 MTIF2P46199 727 aaKnown RBP12.66□□□□□ -0.38
SCN5A-205ENST00000423572 SPC24Q8NBT2 197 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 C8orf76Q96K31 380 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 HMGB1P09429 215 aaKnown RBP12.66□□□□□ -0.38
SCN5A-205ENST00000423572 UBA7P41226 1012 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 IFIT1BQ5T764 474 aaKnown RBP12.66□□□□□ -0.38
SCN5A-205ENST00000423572 CDAN1Q8IWY9 1227 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 DDX12PQ92771 950 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 HS1BP3Q53T59 392 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 TXNDC16Q9P2K2 825 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 MRVI1Q9Y6F6 885 aa12.66□□□□□ -0.38
SCN5A-205ENST00000423572 HEATR3Q7Z4Q2 680 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 KIAA1524Q8TCG1 905 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 MAK16Q9BXY0 300 aaKnown RBP12.65□□□□□ -0.38
SCN5A-205ENST00000423572 TMCO5BA8MYB1 307 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 NAA16Q6N069 864 aaPredicted RBP12.65□□□□□ -0.38
SCN5A-205ENST00000423572 FAM114A1Q8IWE2 563 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 CFAP57Q96MR6 1250 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 TSPY26PQ9H489 355 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 FAM13AO94988 1023 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 PSMC4P43686 418 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 HSPA2P54652 639 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 KRT23Q9C075 422 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 C9orf84Q5VXU9 1444 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 MRE11P49959 708 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 DUSP27Q5VZP5 1158 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 ZNF772Q68DY9 489 aaPredicted RBP12.65□□□□□ -0.38
SCN5A-205ENST00000423572 CCT6BQ92526 530 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 UPF3BQ9BZI7 483 aaKnown RBP12.65□□□□□ -0.38
SCN5A-205ENST00000423572 DBF4Q9UBU7 674 aaPredicted RBP12.65□□□□□ -0.38
SCN5A-205ENST00000423572 SYNJ1O43426 1573 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 CRCPO75575 148 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 MCM3P25205 808 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 PABPC4Q13310 644 aaKnown RBP eCLIP12.65□□□□□ -0.38
SCN5A-205ENST00000423572 CCDC144CPQ8IYA2 1237 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 PFDN4Q9NQP4 134 aa12.65□□□□□ -0.38
SCN5A-205ENST00000423572 SNRPA1P09661 255 aaKnown RBP12.65□□□□□ -0.39
SCN5A-205ENST00000423572 UQCRFS1P1P0C7P4 283 aa12.65□□□□□ -0.39
SCN5A-205ENST00000423572 AKNAD1Q5T1N1 836 aa12.65□□□□□ -0.39
SCN5A-205ENST00000423572 RNF214Q8ND24 703 aa12.65□□□□□ -0.39
SCN5A-205ENST00000423572 NSMCE1Q8WV22 266 aa12.65□□□□□ -0.39
SCN5A-205ENST00000423572 CCDC114Q96M63 670 aa12.65□□□□□ -0.39
SCN5A-205ENST00000423572 USO1O60763 962 aaKnown RBP12.64□□□□□ -0.39
SCN5A-205ENST00000423572 CFAP100Q494V2 611 aa12.64□□□□□ -0.39
SCN5A-205ENST00000423572 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.64□□□□□ -0.39
SCN5A-205ENST00000423572 IQCGQ9H095 443 aaKnown RBP12.64□□□□□ -0.39
SCN5A-205ENST00000423572 PYM1Q9BRP8 204 aaKnown RBP12.64□□□□□ -0.39
SCN5A-205ENST00000423572 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCN5A-205ENST00000423572 SNAPC4Q5SXM2 1469 aa12.64□□□□□ -0.39
SCN5A-205ENST00000423572 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
SCN5A-205ENST00000423572 ANKRD2Q9GZV1 360 aa12.64□□□□□ -0.39
SCN5A-205ENST00000423572 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
SCN5A-205ENST00000423572 IL2RBP14784 551 aa12.64□□□□□ -0.39
SCN5A-205ENST00000423572 CYP7A1P22680 504 aa12.64□□□□□ -0.39
SCN5A-205ENST00000423572 EXOC1Q9NV70 894 aa12.64□□□□□ -0.39
SCN5A-205ENST00000423572 WDR33Q9C0J8 1336 aaKnown RBP12.64□□□□□ -0.39
SCN5A-205ENST00000423572 NOP9Q86U38 636 aaKnown RBP12.64□□□□□ -0.39
SCN5A-205ENST00000423572 ZSCAN31Q96LW9 406 aaPredicted RBP12.64□□□□□ -0.39
SCN5A-205ENST00000423572 NUP88Q99567 741 aaPredicted RBP12.64□□□□□ -0.39
SCN5A-205ENST00000423572 MCM10Q7L590 875 aa12.63□□□□□ -0.39
SCN5A-205ENST00000423572 GTPBP4Q9BZE4 634 aaKnown RBP12.63□□□□□ -0.39
SCN5A-205ENST00000423572 UTP14CQ5TAP6 766 aaKnown RBP12.63□□□□□ -0.39
SCN5A-205ENST00000423572 RXRBP28702 533 aa12.63□□□□□ -0.39
SCN5A-205ENST00000423572 C1orf228Q6PIY5 440 aa12.63□□□□□ -0.39
SCN5A-205ENST00000423572 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
SCN5A-205ENST00000423572 ANO3Q9BYT9 981 aa12.63□□□□□ -0.39
SCN5A-205ENST00000423572 AZI2Q9H6S1 392 aa12.63□□□□□ -0.39
SCN5A-205ENST00000423572 EIF4G3O43432 1585 aaKnown RBP12.63□□□□□ -0.39
SCN5A-205ENST00000423572 LDHBP07195 334 aaKnown RBP12.63□□□□□ -0.39
SCN5A-205ENST00000423572 PPP1R9BQ96SB3 815 aa12.63□□□□□ -0.39
SCN5A-205ENST00000423572 DNM2P50570 870 aa12.63□□□□□ -0.39
SCN5A-205ENST00000423572 NBPF7P0C2Y1 421 aaPredicted RBP12.63□□□□□ -0.39
SCN5A-205ENST00000423572 MAP7D1Q3KQU3 841 aa12.63□□□□□ -0.39
SCN5A-205ENST00000423572 ABI1Q8IZP0 508 aa12.63□□□□□ -0.39
SCN5A-205ENST00000423572 EXOC6Q8TAG9 804 aa12.63□□□□□ -0.39
SCN5A-205ENST00000423572 TTC30AQ86WT1 665 aa12.62□□□□□ -0.39
SCN5A-205ENST00000423572 GEN1Q17RS7 908 aa12.62□□□□□ -0.39
SCN5A-205ENST00000423572 PTPDC1A2A3K4 754 aa12.62□□□□□ -0.39
SCN5A-205ENST00000423572 EEF2P13639 858 aaKnown RBP12.62□□□□□ -0.39
SCN5A-205ENST00000423572 DPP8Q6V1X1 898 aaPredicted RBP12.62□□□□□ -0.39
SCN5A-205ENST00000423572 GADL1Q6ZQY3 521 aa12.62□□□□□ -0.39
SCN5A-205ENST00000423572 CCDC125Q86Z20 511 aa12.62□□□□□ -0.39
SCN5A-205ENST00000423572 RNF169Q8NCN4 708 aa12.62□□□□□ -0.39
SCN5A-205ENST00000423572 SERPINA10Q9UK55 444 aa12.62□□□□□ -0.39
SCN5A-205ENST00000423572 DAPK3O43293 454 aa12.62□□□□□ -0.39
SCN5A-205ENST00000423572 UBE3BQ7Z3V4 1068 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms