RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
USP49-204ENST00000423567 RTL5Q5HYW3 569 aaPredicted RBP13.96□□□□□ -0.17
USP49-204ENST00000423567 G2E3Q7L622 706 aa13.96□□□□□ -0.17
USP49-204ENST00000423567 SYNE4Q8N205 404 aa13.96□□□□□ -0.17
USP49-204ENST00000423567 C7orf43Q8WVR3 580 aa13.96□□□□□ -0.17
USP49-204ENST00000423567 PCCAP05165 728 aaPredicted RBP13.95□□□□□ -0.18
USP49-204ENST00000423567 DNAAF4Q8WXU2 420 aa13.95□□□□□ -0.18
USP49-204ENST00000423567 ABCC4O15439 1325 aa13.94□□□□□ -0.18
USP49-204ENST00000423567 KDM2BQ8NHM5 1336 aa13.94□□□□□ -0.18
USP49-204ENST00000423567 ARFGEF2Q9Y6D5 1785 aa13.94□□□□□ -0.18
USP49-204ENST00000423567 BBOX1O75936 387 aa13.94□□□□□ -0.18
USP49-204ENST00000423567 FKBP4Q02790 459 aaKnown RBP eCLIP13.94□□□□□ -0.18
USP49-204ENST00000423567 SLX4Q8IY92 1834 aa13.94□□□□□ -0.18
USP49-204ENST00000423567 GRAPQ13588 217 aa13.93□□□□□ -0.18
USP49-204ENST00000423567 SF3B3Q15393 1217 aaKnown RBP13.93□□□□□ -0.18
USP49-204ENST00000423567 OLFM4Q6UX06 510 aa13.93□□□□□ -0.18
USP49-204ENST00000423567 TMC4Q7Z404 712 aa13.93□□□□□ -0.18
USP49-204ENST00000423567 GRAPLQ8TC17 118 aaPredicted RBP13.93□□□□□ -0.18
USP49-204ENST00000423567 NEURL1BA8MQ27 555 aa13.92□□□□□ -0.18
USP49-204ENST00000423567 IGKV5-2P06315 115 aa13.92□□□□□ -0.18
USP49-204ENST00000423567 CWF19L2Q2TBE0 894 aaKnown RBP13.92□□□□□ -0.18
USP49-204ENST00000423567 DPY19L2Q6NUT2 758 aa13.92□□□□□ -0.18
USP49-204ENST00000423567 CDCA7LQ96GN5 454 aa13.92□□□□□ -0.18
USP49-204ENST00000423567 PSMD1Q99460 953 aa13.92□□□□□ -0.18
USP49-204ENST00000423567 ATP6V0A2Q9Y487 856 aa13.92□□□□□ -0.18
USP49-204ENST00000423567 CDHR2Q9BYE9 1310 aa13.91□□□□□ -0.18
USP49-204ENST00000423567 PDE8AO60658 829 aa13.91□□□□□ -0.18
USP49-204ENST00000423567 CT47B1P0C2W7 299 aaPredicted RBP13.91□□□□□ -0.18
USP49-204ENST00000423567 PRELPP51888 382 aa13.91□□□□□ -0.18
USP49-204ENST00000423567 CCDC152Q4G0S7 254 aa13.91□□□□□ -0.18
USP49-204ENST00000423567 LINS1Q8NG48 757 aa13.91□□□□□ -0.18
USP49-204ENST00000423567 ZNF277Q9NRM2 450 aaPredicted RBP13.91□□□□□ -0.18
USP49-204ENST00000423567 HNRNPUQ00839 825 aaKnown RBP eCLIP13.9□□□□□ -0.18
USP49-204ENST00000423567 GCKRQ14397 625 aa13.9□□□□□ -0.18
USP49-204ENST00000423567 SP8Q8IXZ3 490 aa13.9□□□□□ -0.18
USP49-204ENST00000423567 SUPT20HQ8NEM7 779 aa13.9□□□□□ -0.18
USP49-204ENST00000423567 JDP2Q8WYK2 163 aa13.9□□□□□ -0.18
USP49-204ENST00000423567 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
USP49-204ENST00000423567 CACNA1SQ13698 1873 aa13.9□□□□□ -0.18
USP49-204ENST00000423567 GLTPD2A6NH11 291 aa13.89□□□□□ -0.19
USP49-204ENST00000423567 F6X3S4 739 aa13.89□□□□□ -0.19
USP49-204ENST00000423567 IARSP41252 1262 aaKnown RBP13.89□□□□□ -0.19
USP49-204ENST00000423567 ALDH1L2Q3SY69 923 aa13.89□□□□□ -0.19
USP49-204ENST00000423567 CHADLQ6NUI6 762 aa13.89□□□□□ -0.19
USP49-204ENST00000423567 DPP8Q6V1X1 898 aaPredicted RBP13.89□□□□□ -0.19
USP49-204ENST00000423567 UBE3BQ7Z3V4 1068 aa13.89□□□□□ -0.19
USP49-204ENST00000423567 C16orf71Q8IYS4 520 aaPredicted RBP13.89□□□□□ -0.19
USP49-204ENST00000423567 TRMT2AQ8IZ69 625 aaKnown RBP13.89□□□□□ -0.19
USP49-204ENST00000423567 H7C1W4 665 aa13.88□□□□□ -0.19
USP49-204ENST00000423567 SLC4A10Q6U841 1118 aa13.88□□□□□ -0.19
USP49-204ENST00000423567 MPNDQ8N594 471 aa13.88□□□□□ -0.19
USP49-204ENST00000423567 MRPL50Q8N5N7 158 aaKnown RBP13.88□□□□□ -0.19
USP49-204ENST00000423567 SSH1Q8WYL5 1049 aa13.88□□□□□ -0.19
USP49-204ENST00000423567 CELF1Q92879 486 aaKnown RBP13.88□□□□□ -0.19
USP49-204ENST00000423567 NMRK2Q9NPI5 230 aa13.88□□□□□ -0.19
USP49-204ENST00000423567 SMC4Q9NTJ3 1288 aa13.88□□□□□ -0.19
USP49-204ENST00000423567 FER1L6Q2WGJ9 1857 aa13.88□□□□□ -0.19
USP49-204ENST00000423567 PTPRCP08575 1304 aa13.88□□□□□ -0.19
USP49-204ENST00000423567 CTSWP56202 376 aa13.87□□□□□ -0.19
USP49-204ENST00000423567 C1QTNF8P60827 252 aa13.87□□□□□ -0.19
USP49-204ENST00000423567 RPS8P62241 208 aaKnown RBP13.87□□□□□ -0.19
USP49-204ENST00000423567 BEND3Q5T5X7 828 aa13.87□□□□□ -0.19
USP49-204ENST00000423567 LARGE2Q8N3Y3 721 aa13.87□□□□□ -0.19
USP49-204ENST00000423567 CCDC85AQ96PX6 553 aaPredicted RBP13.87□□□□□ -0.19
USP49-204ENST00000423567 SRCIN1Q9C0H9 1055 aa13.87□□□□□ -0.19
USP49-204ENST00000423567 VPS33BQ9H267 617 aa13.87□□□□□ -0.19
USP49-204ENST00000423567 CACNA1FO60840 1977 aa13.87□□□□□ -0.19
USP49-204ENST00000423567 SBF1O95248 1867 aa13.87□□□□□ -0.19
USP49-204ENST00000423567 KIF3CO14782 793 aa13.86□□□□□ -0.19
USP49-204ENST00000423567 PPIP5K2O43314 1243 aa13.86□□□□□ -0.19
USP49-204ENST00000423567 ALDH1L1O75891 902 aa13.86□□□□□ -0.19
USP49-204ENST00000423567 ANKRD18AQ8IVF6 992 aa13.86□□□□□ -0.19
USP49-204ENST00000423567 CDC5LQ99459 802 aaKnown RBP13.86□□□□□ -0.19
USP49-204ENST00000423567 BCL2L13Q9BXK5 485 aa13.86□□□□□ -0.19
USP49-204ENST00000423567 RRAGCQ9HB90 399 aa13.86□□□□□ -0.19
USP49-204ENST00000423567 C9orf78Q9NZ63 289 aaPredicted RBP13.86□□□□□ -0.19
USP49-204ENST00000423567 DDX60Q8IY21 1712 aaKnown RBP13.86□□□□□ -0.19
USP49-204ENST00000423567 SNED1Q8TER0 1413 aa13.85□□□□□ -0.19
USP49-204ENST00000423567 HAX1O00165 279 aa13.85□□□□□ -0.19
USP49-204ENST00000423567 VEGFAP15692 232 aaPredicted RBP13.85□□□□□ -0.19
USP49-204ENST00000423567 EIF6P56537 245 aaKnown RBP13.85□□□□□ -0.19
USP49-204ENST00000423567 NIM1KQ8IY84 436 aa13.85□□□□□ -0.19
USP49-204ENST00000423567 TTLL11Q8NHH1 800 aa13.85□□□□□ -0.19
USP49-204ENST00000423567 PLA2G12BQ9BX93 195 aa13.85□□□□□ -0.19
USP49-204ENST00000423567 RTFDC1Q9BY42 306 aaPredicted RBP13.85□□□□□ -0.19
USP49-204ENST00000423567 SEC31BQ9NQW1 1179 aa13.85□□□□□ -0.19
USP49-204ENST00000423567 NSFL1CQ9UNZ2 370 aaKnown RBP13.85□□□□□ -0.19
USP49-204ENST00000423567 TIAM2Q8IVF5 1701 aa13.84□□□□□ -0.19
USP49-204ENST00000423567 LAMB2P55268 1798 aa13.84□□□□□ -0.19
USP49-204ENST00000423567 TOMM70O94826 608 aa13.84□□□□□ -0.19
USP49-204ENST00000423567 C6orf229H3BNL8 230 aa13.83□□□□□ -0.2
USP49-204ENST00000423567 FZD9O00144 591 aa13.83□□□□□ -0.2
USP49-204ENST00000423567 GRM8O00222 908 aa13.83□□□□□ -0.2
USP49-204ENST00000423567 CASP7P55210 303 aa13.83□□□□□ -0.2
USP49-204ENST00000423567 AOC3Q16853 763 aa13.83□□□□□ -0.2
USP49-204ENST00000423567 SLC51AQ86UW1 340 aa13.83□□□□□ -0.2
USP49-204ENST00000423567 EYA3Q99504 573 aa13.83□□□□□ -0.2
USP49-204ENST00000423567 GREM2Q9H772 168 aa13.83□□□□□ -0.2
USP49-204ENST00000423567 ANKIB1Q9P2G1 1089 aa13.83□□□□□ -0.2
USP49-204ENST00000423567 RTL9Q8NET4 1388 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms