RNA–Protein interactions for RNA: ENST00000422998.1

DENND1B-205, Transcript of DENN domain containing 1B, humanhuman

TSL 3

Gene DENND1B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-205ENST00000422998 FOXO4P98177 505 aa22.67■■□□□ 1.22
DENND1B-205ENST00000422998 RPGRQ92834 1020 aaKnown RBP22.67■■□□□ 1.22
DENND1B-205ENST00000422998 KAZALD1Q96I82 304 aa22.67■■□□□ 1.22
DENND1B-205ENST00000422998 GNAI3P08754 354 aa22.66■■□□□ 1.22
DENND1B-205ENST00000422998 RLBP1P12271 317 aa22.66■■□□□ 1.22
DENND1B-205ENST00000422998 GRIPAP1Q4V328 841 aa22.66■■□□□ 1.22
DENND1B-205ENST00000422998 CC2D2BQ6DHV5 1058 aa22.66■■□□□ 1.22
DENND1B-205ENST00000422998 FTSJ3Q8IY81 847 aaKnown RBP22.66■■□□□ 1.22
DENND1B-205ENST00000422998 TMEM57Q8N5G2 664 aa22.66■■□□□ 1.22
DENND1B-205ENST00000422998 TNNQ9UQP3 1299 aa22.66■■□□□ 1.22
DENND1B-205ENST00000422998 SLX4Q8IY92 1834 aa22.66■■□□□ 1.22
DENND1B-205ENST00000422998 GRIN3BO60391 1043 aa22.65■■□□□ 1.22
DENND1B-205ENST00000422998 RTL5Q5HYW3 569 aaPredicted RBP22.65■■□□□ 1.22
DENND1B-205ENST00000422998 SOGA3Q5TF21 947 aa22.65■■□□□ 1.22
DENND1B-205ENST00000422998 DDX46Q7L014 1031 aaKnown RBP22.65■■□□□ 1.22
DENND1B-205ENST00000422998 ZNF622Q969S3 477 aaKnown RBP eCLIP22.65■■□□□ 1.22
DENND1B-205ENST00000422998 GRAPQ13588 217 aa22.64■■□□□ 1.21
DENND1B-205ENST00000422998 PRPF40BQ6NWY9 871 aaKnown RBP22.64■■□□□ 1.21
DENND1B-205ENST00000422998 GRAPLQ8TC17 118 aaPredicted RBP22.64■■□□□ 1.21
DENND1B-205ENST00000422998 UTRNP46939 3433 aa22.64■■□□□ 1.21
DENND1B-205ENST00000422998 JARID2Q92833 1246 aaPredicted RBP22.63■■□□□ 1.21
DENND1B-205ENST00000422998 CLUAP1Q96AJ1 413 aa22.63■■□□□ 1.21
DENND1B-205ENST00000422998 SNED1Q8TER0 1413 aa22.63■■□□□ 1.21
DENND1B-205ENST00000422998 ZBTB7BO15156 539 aaPredicted RBP22.62■■□□□ 1.21
DENND1B-205ENST00000422998 YBX3P16989 372 aaKnown RBP eCLIP22.62■■□□□ 1.21
DENND1B-205ENST00000422998 SUCLG2Q96I99 432 aa22.62■■□□□ 1.21
DENND1B-205ENST00000422998 UBTFL1P0CB47 393 aaPredicted RBP22.61■■□□□ 1.21
DENND1B-205ENST00000422998 RRP1P56182 461 aaKnown RBP22.61■■□□□ 1.21
DENND1B-205ENST00000422998 EPHA10Q5JZY3 1008 aa22.61■■□□□ 1.21
DENND1B-205ENST00000422998 MEIS3Q99687 375 aa22.61■■□□□ 1.21
DENND1B-205ENST00000422998 CHMP4BQ9H444 224 aaKnown RBP22.61■■□□□ 1.21
DENND1B-205ENST00000422998 BCS1LQ9Y276 419 aa22.61■■□□□ 1.21
DENND1B-205ENST00000422998 RPS8P62241 208 aaKnown RBP22.6■■□□□ 1.21
DENND1B-205ENST00000422998 MTX1Q13505 466 aa22.6■■□□□ 1.21
DENND1B-205ENST00000422998 MVPQ14764 893 aaKnown RBP22.6■■□□□ 1.21
DENND1B-205ENST00000422998 ANKRD44Q8N8A2 993 aa22.6■■□□□ 1.21
DENND1B-205ENST00000422998 CDC5LQ99459 802 aaKnown RBP22.6■■□□□ 1.21
DENND1B-205ENST00000422998 ATP6V0A2Q9Y487 856 aa22.6■■□□□ 1.21
DENND1B-205ENST00000422998 LTBP3Q9NS15 1303 aa22.59■■□□□ 1.21
DENND1B-205ENST00000422998 DCAF8L1A6NGE4 600 aa22.59■■□□□ 1.21
DENND1B-205ENST00000422998 SP8Q8IXZ3 490 aa22.59■■□□□ 1.21
DENND1B-205ENST00000422998 GREM2Q9H772 168 aa22.59■■□□□ 1.21
DENND1B-205ENST00000422998 DDX19BQ9UMR2 479 aa22.59■■□□□ 1.21
DENND1B-205ENST00000422998 FER1L6Q2WGJ9 1857 aa22.59■■□□□ 1.21
DENND1B-205ENST00000422998 LRRC37AA6NMS7 1700 aa22.59■■□□□ 1.21
DENND1B-205ENST00000422998 GPR162Q16538 588 aa22.58■■□□□ 1.21
DENND1B-205ENST00000422998 LMBR1LQ6UX01 489 aa22.58■■□□□ 1.21
DENND1B-205ENST00000422998 PANK1Q8TE04 598 aa22.58■■□□□ 1.21
DENND1B-205ENST00000422998 BICC1Q9H694 974 aaKnown RBP22.58■■□□□ 1.21
DENND1B-205ENST00000422998 PLIN1O60240 522 aa22.57■■□□□ 1.2
DENND1B-205ENST00000422998 CELF1Q92879 486 aaKnown RBP22.57■■□□□ 1.2
DENND1B-205ENST00000422998 TAF1P21675 1872 aa22.56■■□□□ 1.2
DENND1B-205ENST00000422998 CACNA1SQ13698 1873 aa22.56■■□□□ 1.2
DENND1B-205ENST00000422998 PPEF1O14829 653 aaPredicted RBP22.56■■□□□ 1.2
DENND1B-205ENST00000422998 GNAI2P04899 355 aa22.56■■□□□ 1.2
DENND1B-205ENST00000422998 ITGA6P23229 1130 aa22.56■■□□□ 1.2
DENND1B-205ENST00000422998 FAM161AQ3B820 660 aa22.56■■□□□ 1.2
DENND1B-205ENST00000422998 ITPRIPQ8IWB1 547 aa22.56■■□□□ 1.2
DENND1B-205ENST00000422998 RTKN2Q8IZC4 609 aa22.56■■□□□ 1.2
DENND1B-205ENST00000422998 SEC31BQ9NQW1 1179 aa22.56■■□□□ 1.2
DENND1B-205ENST00000422998 BSDC1Q9NW68 430 aaPredicted RBP22.56■■□□□ 1.2
DENND1B-205ENST00000422998 IFIT5Q13325 482 aaKnown RBP22.55■■□□□ 1.2
DENND1B-205ENST00000422998 CCDC93Q567U6 631 aa22.55■■□□□ 1.2
DENND1B-205ENST00000422998 ANKRD18BA2A2Z9 1011 aa22.54■■□□□ 1.2
DENND1B-205ENST00000422998 ANKRD18AQ8IVF6 992 aa22.54■■□□□ 1.2
DENND1B-205ENST00000422998 PSMD1Q99460 953 aa22.54■■□□□ 1.2
DENND1B-205ENST00000422998 RTFDC1Q9BY42 306 aaPredicted RBP22.54■■□□□ 1.2
DENND1B-205ENST00000422998 ZBTB40Q9NUA8 1239 aa22.54■■□□□ 1.2
DENND1B-205ENST00000422998 FBXO3Q9UK99 471 aa22.54■■□□□ 1.2
DENND1B-205ENST00000422998 LRRFIP2Q9Y608 721 aaKnown RBP22.54■■□□□ 1.2
DENND1B-205ENST00000422998 COL4A1P02462 1669 aa22.53■■□□□ 1.2
DENND1B-205ENST00000422998 C21orf2O43822 256 aa22.53■■□□□ 1.2
DENND1B-205ENST00000422998 CCDC57Q2TAC2 916 aa22.53■■□□□ 1.2
DENND1B-205ENST00000422998 VPS33BQ9H267 617 aa22.53■■□□□ 1.2
DENND1B-205ENST00000422998 PODXL2Q9NZ53 605 aa22.53■■□□□ 1.2
DENND1B-205ENST00000422998 RFX5P48382 616 aaPredicted RBP22.52■■□□□ 1.2
DENND1B-205ENST00000422998 C20orf194Q5TEA3 1177 aa22.52■■□□□ 1.2
DENND1B-205ENST00000422998 LTBP1Q14766 1721 aa22.51■■□□□ 1.19
DENND1B-205ENST00000422998 CHD4Q14839 1912 aa22.51■■□□□ 1.19
DENND1B-205ENST00000422998 NFKBIEO00221 500 aa22.51■■□□□ 1.19
DENND1B-205ENST00000422998 IGHMBP2P38935 993 aaKnown RBP22.51■■□□□ 1.19
DENND1B-205ENST00000422998 AAMPQ13685 434 aa22.51■■□□□ 1.19
DENND1B-205ENST00000422998 TMX4Q9H1E5 349 aaPredicted RBP22.51■■□□□ 1.19
DENND1B-205ENST00000422998 COG6Q9Y2V7 657 aa22.51■■□□□ 1.19
DENND1B-205ENST00000422998 SBF1O95248 1867 aa22.5■■□□□ 1.19
DENND1B-205ENST00000422998 FKBP4Q02790 459 aaKnown RBP eCLIP22.49■■□□□ 1.19
DENND1B-205ENST00000422998 CCDC85AQ96PX6 553 aaPredicted RBP22.49■■□□□ 1.19
DENND1B-205ENST00000422998 COPRSQ9NQ92 184 aa22.49■■□□□ 1.19
DENND1B-205ENST00000422998 TAOK3Q9H2K8 898 aa22.48■■□□□ 1.19
DENND1B-205ENST00000422998 MINPP1Q9UNW1 487 aa22.48■■□□□ 1.19
DENND1B-205ENST00000422998 ATP8B2P98198 1209 aa22.47■■□□□ 1.19
DENND1B-205ENST00000422998 PTPN12Q05209 780 aaKnown RBP22.47■■□□□ 1.19
DENND1B-205ENST00000422998 ARHGAP27Q6ZUM4 889 aa22.47■■□□□ 1.19
DENND1B-205ENST00000422998 PELP1Q8IZL8 1130 aaKnown RBP22.47■■□□□ 1.19
DENND1B-205ENST00000422998 SUPT20HQ8NEM7 779 aa22.47■■□□□ 1.19
DENND1B-205ENST00000422998 SSH3Q8TE77 659 aa22.47■■□□□ 1.19
DENND1B-205ENST00000422998 MPHOSPH8Q99549 860 aa22.47■■□□□ 1.19
DENND1B-205ENST00000422998 DICER1Q9UPY3 1922 aaKnown RBP22.47■■□□□ 1.19
DENND1B-205ENST00000422998 POLA2Q14181 598 aa22.46■■□□□ 1.19
DENND1B-205ENST00000422998 RPAP2Q8IXW5 612 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms