RNA–Protein interactions for RNA: ENST00000422465.6

RPS3-202, Transcript of ribosomal protein S3, humanhuman

TSL 2

Gene RPS3, Length 903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-202ENST00000422465 TBC1D9Q6ZT07 1266 aa12.86□□□□□ -0.35
RPS3-202ENST00000422465 COL23A1Q86Y22 540 aaPredicted RBP12.86□□□□□ -0.35
RPS3-202ENST00000422465 DDX54Q8TDD1 881 aaKnown RBP12.86□□□□□ -0.35
RPS3-202ENST00000422465 SNX21Q969T3 373 aa12.86□□□□□ -0.35
RPS3-202ENST00000422465 PRIM1P49642 420 aaKnown RBP12.85□□□□□ -0.35
RPS3-202ENST00000422465 ATP8B2P98198 1209 aa12.85□□□□□ -0.35
RPS3-202ENST00000422465 SIPA1L3O60292 1781 aaPredicted RBP12.84□□□□□ -0.35
RPS3-202ENST00000422465 HEG1Q9ULI3 1381 aa12.84□□□□□ -0.35
RPS3-202ENST00000422465 TOMM70O94826 608 aa12.84□□□□□ -0.35
RPS3-202ENST00000422465 NUDT7P0C024 238 aa12.84□□□□□ -0.35
RPS3-202ENST00000422465 ARHGEF1Q92888 912 aaKnown RBP12.84□□□□□ -0.35
RPS3-202ENST00000422465 OSBPL3Q9H4L5 887 aa12.84□□□□□ -0.35
RPS3-202ENST00000422465 DOT1LQ8TEK3 1739 aa12.83□□□□□ -0.36
RPS3-202ENST00000422465 BTBD11A6QL63 1104 aa12.83□□□□□ -0.36
RPS3-202ENST00000422465 KCNQ4P56696 695 aa12.83□□□□□ -0.36
RPS3-202ENST00000422465 TEFQ10587 303 aa12.83□□□□□ -0.36
RPS3-202ENST00000422465 C1orf141Q5JVX7 400 aa12.83□□□□□ -0.36
RPS3-202ENST00000422465 MSL1Q68DK7 614 aa12.83□□□□□ -0.36
RPS3-202ENST00000422465 C16orf71Q8IYS4 520 aaPredicted RBP12.83□□□□□ -0.36
RPS3-202ENST00000422465 DNAJC5GQ8N7S2 189 aa12.83□□□□□ -0.36
RPS3-202ENST00000422465 KCNQ3O43525 872 aa12.82□□□□□ -0.36
RPS3-202ENST00000422465 SMARCA5O60264 1052 aaPredicted RBP12.82□□□□□ -0.36
RPS3-202ENST00000422465 MPRIPQ6WCQ1 1025 aa12.82□□□□□ -0.36
RPS3-202ENST00000422465 OTUD7AQ8TE49 926 aaPredicted RBP12.82□□□□□ -0.36
RPS3-202ENST00000422465 NECTIN2Q92692 538 aa12.82□□□□□ -0.36
RPS3-202ENST00000422465 KIF2CQ99661 725 aa12.82□□□□□ -0.36
RPS3-202ENST00000422465 HSCBQ8IWL3 235 aa12.81□□□□□ -0.36
RPS3-202ENST00000422465 MARVELD3Q96A59 401 aa12.81□□□□□ -0.36
RPS3-202ENST00000422465 USP44Q9H0E7 712 aa12.81□□□□□ -0.36
RPS3-202ENST00000422465 PHAXQ9H814 394 aaKnown RBP12.81□□□□□ -0.36
RPS3-202ENST00000422465 SALL3Q9BXA9 1300 aa12.81□□□□□ -0.36
RPS3-202ENST00000422465 IBTKQ9P2D0 1353 aaPredicted RBP12.81□□□□□ -0.36
RPS3-202ENST00000422465 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
RPS3-202ENST00000422465 EVI5O60447 810 aa12.8□□□□□ -0.36
RPS3-202ENST00000422465 ZCRB1Q8TBF4 217 aaKnown RBP12.8□□□□□ -0.36
RPS3-202ENST00000422465 LRRFIP2Q9Y608 721 aaKnown RBP12.8□□□□□ -0.36
RPS3-202ENST00000422465 C5P01031 1676 aa12.8□□□□□ -0.36
RPS3-202ENST00000422465 FRAT2O75474 233 aaPredicted RBP12.79□□□□□ -0.36
RPS3-202ENST00000422465 UBTFL1P0CB47 393 aaPredicted RBP12.79□□□□□ -0.36
RPS3-202ENST00000422465 SDSP20132 328 aa12.79□□□□□ -0.36
RPS3-202ENST00000422465 SSH3Q8TE77 659 aa12.79□□□□□ -0.36
RPS3-202ENST00000422465 DNAAF4Q8WXU2 420 aa12.79□□□□□ -0.36
RPS3-202ENST00000422465 SRCIN1Q9C0H9 1055 aa12.79□□□□□ -0.36
RPS3-202ENST00000422465 SLKQ9H2G2 1235 aaPredicted RBP12.79□□□□□ -0.36
RPS3-202ENST00000422465 CHPF2Q9P2E5 772 aa12.79□□□□□ -0.36
RPS3-202ENST00000422465 PNMA6EA0A0J9YXQ4 647 aa12.78□□□□□ -0.36
RPS3-202ENST00000422465 EIF2S2P20042 333 aaKnown RBP12.78□□□□□ -0.36
RPS3-202ENST00000422465 PRELPP51888 382 aa12.78□□□□□ -0.36
RPS3-202ENST00000422465 PDE1AP54750 535 aa12.78□□□□□ -0.36
RPS3-202ENST00000422465 PDIA6Q15084 440 aa12.78□□□□□ -0.36
RPS3-202ENST00000422465 BEND3Q5T5X7 828 aa12.78□□□□□ -0.36
RPS3-202ENST00000422465 JMYQ8N9B5 988 aa12.78□□□□□ -0.36
RPS3-202ENST00000422465 KLRG1Q96E93 195 aa12.78□□□□□ -0.36
RPS3-202ENST00000422465 LRRCC1Q9C099 1032 aa12.78□□□□□ -0.36
RPS3-202ENST00000422465 DBF4Q9UBU7 674 aaPredicted RBP12.78□□□□□ -0.36
RPS3-202ENST00000422465 WDR90Q96KV7 1748 aa12.78□□□□□ -0.36
RPS3-202ENST00000422465 SCN11AQ9UI33 1791 aa12.78□□□□□ -0.36
RPS3-202ENST00000422465 DDIT3P35638 169 aa12.77□□□□□ -0.37
RPS3-202ENST00000422465 TNS4Q8IZW8 715 aa12.77□□□□□ -0.37
RPS3-202ENST00000422465 RBM46Q8TBY0 533 aaKnown RBP12.77□□□□□ -0.37
RPS3-202ENST00000422465 USP26Q9BXU7 913 aa12.77□□□□□ -0.37
RPS3-202ENST00000422465 CHMP5Q9NZZ3 219 aa12.77□□□□□ -0.37
RPS3-202ENST00000422465 STAP2Q9UGK3 403 aa12.77□□□□□ -0.37
RPS3-202ENST00000422465 AOX1Q06278 1338 aa12.77□□□□□ -0.37
RPS3-202ENST00000422465 KDM6AO15550 1401 aaPredicted RBP12.77□□□□□ -0.37
RPS3-202ENST00000422465 MRC1P22897 1456 aa12.77□□□□□ -0.37
RPS3-202ENST00000422465 RAB11FIP3O75154 756 aa12.76□□□□□ -0.37
RPS3-202ENST00000422465 ALDH1L1O75891 902 aa12.76□□□□□ -0.37
RPS3-202ENST00000422465 TATP17735 454 aaPredicted RBP12.76□□□□□ -0.37
RPS3-202ENST00000422465 COL13A1Q5TAT6 717 aaPredicted RBP12.76□□□□□ -0.37
RPS3-202ENST00000422465 CASC1Q6TDU7 716 aa12.76□□□□□ -0.37
RPS3-202ENST00000422465 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
RPS3-202ENST00000422465 AK7Q96M32 723 aa12.76□□□□□ -0.37
RPS3-202ENST00000422465 SPG7Q9UQ90 795 aa12.76□□□□□ -0.37
RPS3-202ENST00000422465 EXOC6BQ9Y2D4 811 aa12.76□□□□□ -0.37
RPS3-202ENST00000422465 MEGF6O75095 1541 aa12.76□□□□□ -0.37
RPS3-202ENST00000422465 PKD1L3Q7Z443 1732 aa12.76□□□□□ -0.37
RPS3-202ENST00000422465 PI4KAP2A4QPH2 592 aa12.75□□□□□ -0.37
RPS3-202ENST00000422465 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
RPS3-202ENST00000422465 APBB1O00213 710 aa12.75□□□□□ -0.37
RPS3-202ENST00000422465 PHKG2P15735 406 aa12.75□□□□□ -0.37
RPS3-202ENST00000422465 EMP3P54852 163 aa12.75□□□□□ -0.37
RPS3-202ENST00000422465 FSTL1Q12841 308 aa12.75□□□□□ -0.37
RPS3-202ENST00000422465 PI4KAP1Q8N8J0 262 aa12.75□□□□□ -0.37
RPS3-202ENST00000422465 LHX6Q9UPM6 363 aa12.75□□□□□ -0.37
RPS3-202ENST00000422465 PALLDQ8WX93 1383 aa12.74□□□□□ -0.37
RPS3-202ENST00000422465 MTX1Q13505 466 aa12.74□□□□□ -0.37
RPS3-202ENST00000422465 RABEP1Q15276 862 aa12.74□□□□□ -0.37
RPS3-202ENST00000422465 KSR2Q6VAB6 950 aa12.74□□□□□ -0.37
RPS3-202ENST00000422465 PPP1R42Q7Z4L9 355 aa12.74□□□□□ -0.37
RPS3-202ENST00000422465 SMARCC1Q92922 1105 aaPredicted RBP12.74□□□□□ -0.37
RPS3-202ENST00000422465 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
RPS3-202ENST00000422465 HYPKQ9NX55 129 aa12.74□□□□□ -0.37
RPS3-202ENST00000422465 TAF1LQ8IZX4 1826 aa12.74□□□□□ -0.37
RPS3-202ENST00000422465 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
RPS3-202ENST00000422465 MX1P20591 662 aa12.73□□□□□ -0.37
RPS3-202ENST00000422465 SSFA2P28290 1259 aa12.73□□□□□ -0.37
RPS3-202ENST00000422465 IFNL2Q8IZJ0 200 aa12.73□□□□□ -0.37
RPS3-202ENST00000422465 DDX21Q9NR30 783 aaKnown RBP eCLIP12.73□□□□□ -0.375e-35■□□□□ 8.5
RPS3-202ENST00000422465 K7ELQ4 463 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms