RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 GRAPQ13588 217 aa19.88■□□□□ 0.77
BRAT1-202ENST00000421712 CCDC93Q567U6 631 aa19.88■□□□□ 0.77
BRAT1-202ENST00000421712 ZKSCAN2Q63HK3 967 aa19.88■□□□□ 0.77
BRAT1-202ENST00000421712 GRAPLQ8TC17 118 aaPredicted RBP19.88■□□□□ 0.77
BRAT1-202ENST00000421712 YY1P25490 414 aa19.87■□□□□ 0.77
BRAT1-202ENST00000421712 CASP7P55210 303 aa19.87■□□□□ 0.77
BRAT1-202ENST00000421712 OLFM4Q6UX06 510 aa19.87■□□□□ 0.77
BRAT1-202ENST00000421712 ATF7IPQ6VMQ6 1270 aa19.87■□□□□ 0.77
BRAT1-202ENST00000421712 CLUAP1Q96AJ1 413 aa19.87■□□□□ 0.77
BRAT1-202ENST00000421712 RCAN3Q9UKA8 241 aa19.87■□□□□ 0.77
BRAT1-202ENST00000421712 UTRNP46939 3433 aa19.87■□□□□ 0.77
BRAT1-202ENST00000421712 RASSF7Q02833 373 aa19.86■□□□□ 0.77
BRAT1-202ENST00000421712 TTLL11Q8NHH1 800 aa19.86■□□□□ 0.77
BRAT1-202ENST00000421712 C7orf43Q8WVR3 580 aa19.86■□□□□ 0.77
BRAT1-202ENST00000421712 SEC31BQ9NQW1 1179 aa19.86■□□□□ 0.77
BRAT1-202ENST00000421712 CHMP3Q9Y3E7 222 aa19.86■□□□□ 0.77
BRAT1-202ENST00000421712 CHD4Q14839 1912 aa19.86■□□□□ 0.77
BRAT1-202ENST00000421712 TRIM27P14373 513 aa19.85■□□□□ 0.77
BRAT1-202ENST00000421712 RTKN2Q8IZC4 609 aa19.85■□□□□ 0.77
BRAT1-202ENST00000421712 CELF1Q92879 486 aaKnown RBP19.85■□□□□ 0.77
BRAT1-202ENST00000421712 PLA2G12BQ9BX93 195 aa19.85■□□□□ 0.77
BRAT1-202ENST00000421712 NBPF7P0C2Y1 421 aaPredicted RBP19.84■□□□□ 0.77
BRAT1-202ENST00000421712 RPS8P62241 208 aaKnown RBP19.84■□□□□ 0.77
BRAT1-202ENST00000421712 CC2D2BQ6DHV5 1058 aa19.84■□□□□ 0.77
BRAT1-202ENST00000421712 FTSJ3Q8IY81 847 aaKnown RBP19.84■□□□□ 0.77
BRAT1-202ENST00000421712 TAOK3Q9H2K8 898 aa19.84■□□□□ 0.77
BRAT1-202ENST00000421712 GREM2Q9H772 168 aa19.84■□□□□ 0.77
BRAT1-202ENST00000421712 TNNQ9UQP3 1299 aa19.84■□□□□ 0.77
BRAT1-202ENST00000421712 ATP6V0A2Q9Y487 856 aa19.84■□□□□ 0.77
BRAT1-202ENST00000421712 TAF1P21675 1872 aa19.84■□□□□ 0.77
BRAT1-202ENST00000421712 C9orf131Q5VYM1 1079 aa19.83■□□□□ 0.77
BRAT1-202ENST00000421712 TMC4Q7Z404 712 aa19.83■□□□□ 0.77
BRAT1-202ENST00000421712 ANKRD18AQ8IVF6 992 aa19.83■□□□□ 0.77
BRAT1-202ENST00000421712 CDC5LQ99459 802 aaKnown RBP19.83■□□□□ 0.77
BRAT1-202ENST00000421712 USP44Q9H0E7 712 aa19.83■□□□□ 0.77
BRAT1-202ENST00000421712 RNF181Q9P0P0 153 aa19.83■□□□□ 0.77
BRAT1-202ENST00000421712 NFKBIEO00221 500 aa19.82■□□□□ 0.76
BRAT1-202ENST00000421712 LMBR1LQ6UX01 489 aa19.82■□□□□ 0.76
BRAT1-202ENST00000421712 SP8Q8IXZ3 490 aa19.82■□□□□ 0.76
BRAT1-202ENST00000421712 SUCLG2Q96I99 432 aa19.82■□□□□ 0.76
BRAT1-202ENST00000421712 MYH3P11055 1940 aa19.81■□□□□ 0.76
BRAT1-202ENST00000421712 CSF1RP07333 972 aa19.81■□□□□ 0.76
BRAT1-202ENST00000421712 LMNB1P20700 586 aa19.81■□□□□ 0.76
BRAT1-202ENST00000421712 ITGA6P23229 1130 aa19.81■□□□□ 0.76
BRAT1-202ENST00000421712 FOXO4P98177 505 aa19.81■□□□□ 0.76
BRAT1-202ENST00000421712 FAM161AQ3B820 660 aa19.81■□□□□ 0.76
BRAT1-202ENST00000421712 GRIPAP1Q4V328 841 aa19.81■□□□□ 0.76
BRAT1-202ENST00000421712 INTS3Q68E01 1043 aaKnown RBP19.81■□□□□ 0.76
BRAT1-202ENST00000421712 UTYO14607 1347 aa19.8■□□□□ 0.76
BRAT1-202ENST00000421712 ANKRD18BA2A2Z9 1011 aa19.8■□□□□ 0.76
BRAT1-202ENST00000421712 UBTFL1P0CB47 393 aaPredicted RBP19.8■□□□□ 0.76
BRAT1-202ENST00000421712 IGHMBP2P38935 993 aaKnown RBP19.8■□□□□ 0.76
BRAT1-202ENST00000421712 FKBP4Q02790 459 aaKnown RBP eCLIP19.8■□□□□ 0.76
BRAT1-202ENST00000421712 IFIT5Q13325 482 aaKnown RBP19.8■□□□□ 0.76
BRAT1-202ENST00000421712 TAF7LQ5H9L4 462 aa19.8■□□□□ 0.76
BRAT1-202ENST00000421712 EPHA10Q5JZY3 1008 aa19.8■□□□□ 0.76
BRAT1-202ENST00000421712 SLC51AQ86UW1 340 aa19.8■□□□□ 0.76
BRAT1-202ENST00000421712 DZIP1LQ8IYY4 767 aaKnown RBP19.8■□□□□ 0.76
BRAT1-202ENST00000421712 CCDC57Q2TAC2 916 aa19.79■□□□□ 0.76
BRAT1-202ENST00000421712 DPP8Q6V1X1 898 aaPredicted RBP19.79■□□□□ 0.76
BRAT1-202ENST00000421712 MPNDQ8N594 471 aa19.79■□□□□ 0.76
BRAT1-202ENST00000421712 TMEM57Q8N5G2 664 aa19.79■□□□□ 0.76
BRAT1-202ENST00000421712 MPHOSPH8Q99549 860 aa19.79■□□□□ 0.76
BRAT1-202ENST00000421712 ZNF277Q9NRM2 450 aaPredicted RBP19.79■□□□□ 0.76
BRAT1-202ENST00000421712 HDAC5Q9UQL6 1122 aa19.79■□□□□ 0.76
BRAT1-202ENST00000421712 BICC1Q9H694 974 aaKnown RBP19.78■□□□□ 0.76
BRAT1-202ENST00000421712 NSFL1CQ9UNZ2 370 aaKnown RBP19.78■□□□□ 0.76
BRAT1-202ENST00000421712 LTBP3Q9NS15 1303 aa19.77■□□□□ 0.76
BRAT1-202ENST00000421712 FER1L6Q2WGJ9 1857 aa19.77■□□□□ 0.76
BRAT1-202ENST00000421712 MS4A1P11836 297 aa19.77■□□□□ 0.76
BRAT1-202ENST00000421712 ITPRIPQ8IWB1 547 aa19.77■□□□□ 0.76
BRAT1-202ENST00000421712 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.77■□□□□ 0.76
BRAT1-202ENST00000421712 RTL9Q8NET4 1388 aa19.77■□□□□ 0.76
BRAT1-202ENST00000421712 PLIN1O60240 522 aa19.76■□□□□ 0.75
BRAT1-202ENST00000421712 GNAI3P08754 354 aa19.76■□□□□ 0.75
BRAT1-202ENST00000421712 SUPT20HQ8NEM7 779 aa19.76■□□□□ 0.75
BRAT1-202ENST00000421712 KAZALD1Q96I82 304 aa19.76■□□□□ 0.75
BRAT1-202ENST00000421712 PSMD1Q99460 953 aa19.76■□□□□ 0.75
BRAT1-202ENST00000421712 MEIS3Q99687 375 aa19.76■□□□□ 0.75
BRAT1-202ENST00000421712 ANKIB1Q9P2G1 1089 aa19.76■□□□□ 0.75
BRAT1-202ENST00000421712 CCDC88AQ3V6T2 1871 aa19.75■□□□□ 0.75
BRAT1-202ENST00000421712 C6orf229H3BNL8 230 aa19.75■□□□□ 0.75
BRAT1-202ENST00000421712 PRELPP51888 382 aa19.75■□□□□ 0.75
BRAT1-202ENST00000421712 GPSM2P81274 684 aa19.75■□□□□ 0.75
BRAT1-202ENST00000421712 BSDC1Q9NW68 430 aaPredicted RBP19.75■□□□□ 0.75
BRAT1-202ENST00000421712 SBF1O95248 1867 aa19.75■□□□□ 0.75
BRAT1-202ENST00000421712 RLBP1P12271 317 aa19.74■□□□□ 0.75
BRAT1-202ENST00000421712 IARSP41252 1262 aaKnown RBP19.74■□□□□ 0.75
BRAT1-202ENST00000421712 PANK1Q8TE04 598 aa19.74■□□□□ 0.75
BRAT1-202ENST00000421712 ZNF526Q8TF50 670 aaPredicted RBP19.74■□□□□ 0.75
BRAT1-202ENST00000421712 LRRFIP2Q9Y608 721 aaKnown RBP19.74■□□□□ 0.75
BRAT1-202ENST00000421712 LARGE2Q8N3Y3 721 aa19.73■□□□□ 0.75
BRAT1-202ENST00000421712 ZNF594Q96JF6 807 aaPredicted RBP19.73■□□□□ 0.75
BRAT1-202ENST00000421712 COL4A1P02462 1669 aa19.72■□□□□ 0.75
BRAT1-202ENST00000421712 PPIP5K2O43314 1243 aa19.72■□□□□ 0.75
BRAT1-202ENST00000421712 RABL6Q3YEC7 729 aaPredicted RBP19.72■□□□□ 0.75
BRAT1-202ENST00000421712 LDHAL6AQ6ZMR3 332 aa19.72■□□□□ 0.75
BRAT1-202ENST00000421712 ANKRD44Q8N8A2 993 aa19.72■□□□□ 0.75
BRAT1-202ENST00000421712 JDP2Q8WYK2 163 aa19.72■□□□□ 0.75
BRAT1-202ENST00000421712 CNNM1Q9NRU3 951 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms