RNA–Protein interactions for RNA: ENST00000421664.1

EFEMP1-203, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 4

Gene EFEMP1, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-203ENST00000421664 C9orf78Q9NZ63 289 aaPredicted RBP20.78■□□□□ 0.92
EFEMP1-203ENST00000421664 RTL9Q8NET4 1388 aa20.77■□□□□ 0.92
EFEMP1-203ENST00000421664 INTS3Q68E01 1043 aaKnown RBP20.77■□□□□ 0.92
EFEMP1-203ENST00000421664 DDX46Q7L014 1031 aaKnown RBP20.77■□□□□ 0.92
EFEMP1-203ENST00000421664 SNED1Q8TER0 1413 aa20.77■□□□□ 0.91
EFEMP1-203ENST00000421664 C21orf2O43822 256 aa20.76■□□□□ 0.91
EFEMP1-203ENST00000421664 NBPF7P0C2Y1 421 aaPredicted RBP20.76■□□□□ 0.91
EFEMP1-203ENST00000421664 GRAPQ13588 217 aa20.76■□□□□ 0.91
EFEMP1-203ENST00000421664 CCDC152Q4G0S7 254 aa20.76■□□□□ 0.91
EFEMP1-203ENST00000421664 TTLL11Q8NHH1 800 aa20.76■□□□□ 0.91
EFEMP1-203ENST00000421664 GRAPLQ8TC17 118 aaPredicted RBP20.76■□□□□ 0.91
EFEMP1-203ENST00000421664 USP44Q9H0E7 712 aa20.76■□□□□ 0.91
EFEMP1-203ENST00000421664 LRRC37AA6NMS7 1700 aa20.75■□□□□ 0.91
EFEMP1-203ENST00000421664 TAF1P21675 1872 aa20.75■□□□□ 0.91
EFEMP1-203ENST00000421664 FER1L6Q2WGJ9 1857 aa20.75■□□□□ 0.91
EFEMP1-203ENST00000421664 PPEF1O14829 653 aaPredicted RBP20.75■□□□□ 0.91
EFEMP1-203ENST00000421664 CSF1RP07333 972 aa20.74■□□□□ 0.91
EFEMP1-203ENST00000421664 FOXO4P98177 505 aa20.74■□□□□ 0.91
EFEMP1-203ENST00000421664 SOGA3Q5TF21 947 aa20.74■□□□□ 0.91
EFEMP1-203ENST00000421664 CLUAP1Q96AJ1 413 aa20.74■□□□□ 0.91
EFEMP1-203ENST00000421664 ZNF219Q9P2Y4 722 aaPredicted RBP20.74■□□□□ 0.91
EFEMP1-203ENST00000421664 BBOX1O75936 387 aa20.73■□□□□ 0.91
EFEMP1-203ENST00000421664 EPHA10Q5JZY3 1008 aa20.73■□□□□ 0.91
EFEMP1-203ENST00000421664 ARHGAP27Q6ZUM4 889 aa20.73■□□□□ 0.91
EFEMP1-203ENST00000421664 CELF1Q92879 486 aaKnown RBP20.73■□□□□ 0.91
EFEMP1-203ENST00000421664 KAZALD1Q96I82 304 aa20.73■□□□□ 0.91
EFEMP1-203ENST00000421664 SUCLG2Q96I99 432 aa20.73■□□□□ 0.91
EFEMP1-203ENST00000421664 SEC31BQ9NQW1 1179 aa20.73■□□□□ 0.91
EFEMP1-203ENST00000421664 UTRNP46939 3433 aa20.73■□□□□ 0.91
EFEMP1-203ENST00000421664 NFKBIEO00221 500 aa20.72■□□□□ 0.91
EFEMP1-203ENST00000421664 CCDC93Q567U6 631 aa20.72■□□□□ 0.91
EFEMP1-203ENST00000421664 OLFM4Q6UX06 510 aa20.72■□□□□ 0.91
EFEMP1-203ENST00000421664 SLC51AQ86UW1 340 aa20.72■□□□□ 0.91
EFEMP1-203ENST00000421664 CCDC85AQ96PX6 553 aaPredicted RBP20.72■□□□□ 0.91
EFEMP1-203ENST00000421664 GREM2Q9H772 168 aa20.72■□□□□ 0.91
EFEMP1-203ENST00000421664 ATP6V0A2Q9Y487 856 aa20.72■□□□□ 0.91
EFEMP1-203ENST00000421664 CHD4Q14839 1912 aa20.72■□□□□ 0.91
EFEMP1-203ENST00000421664 FAM161AQ3B820 660 aa20.71■□□□□ 0.91
EFEMP1-203ENST00000421664 CC2D2BQ6DHV5 1058 aa20.71■□□□□ 0.91
EFEMP1-203ENST00000421664 TMC4Q7Z404 712 aa20.71■□□□□ 0.91
EFEMP1-203ENST00000421664 DZIP1LQ8IYY4 767 aaKnown RBP20.71■□□□□ 0.91
EFEMP1-203ENST00000421664 TMEM57Q8N5G2 664 aa20.71■□□□□ 0.91
EFEMP1-203ENST00000421664 LTBP3Q9NS15 1303 aa20.71■□□□□ 0.91
EFEMP1-203ENST00000421664 RLBP1P12271 317 aa20.7■□□□□ 0.9
EFEMP1-203ENST00000421664 RPS8P62241 208 aaKnown RBP20.69■□□□□ 0.9
EFEMP1-203ENST00000421664 RASSF7Q02833 373 aa20.69■□□□□ 0.9
EFEMP1-203ENST00000421664 RABL6Q3YEC7 729 aaPredicted RBP20.69■□□□□ 0.9
EFEMP1-203ENST00000421664 SP8Q8IXZ3 490 aa20.69■□□□□ 0.9
EFEMP1-203ENST00000421664 FTSJ3Q8IY81 847 aaKnown RBP20.69■□□□□ 0.9
EFEMP1-203ENST00000421664 CDC5LQ99459 802 aaKnown RBP20.69■□□□□ 0.9
EFEMP1-203ENST00000421664 MEIS3Q99687 375 aa20.69■□□□□ 0.9
EFEMP1-203ENST00000421664 LTBP1Q14766 1721 aa20.68■□□□□ 0.9
EFEMP1-203ENST00000421664 UBTFL1P0CB47 393 aaPredicted RBP20.68■□□□□ 0.9
EFEMP1-203ENST00000421664 GRIPAP1Q4V328 841 aa20.68■□□□□ 0.9
EFEMP1-203ENST00000421664 LMBR1LQ6UX01 489 aa20.68■□□□□ 0.9
EFEMP1-203ENST00000421664 RTKN2Q8IZC4 609 aa20.68■□□□□ 0.9
EFEMP1-203ENST00000421664 ANKRD44Q8N8A2 993 aa20.68■□□□□ 0.9
EFEMP1-203ENST00000421664 BICC1Q9H694 974 aaKnown RBP20.68■□□□□ 0.9
EFEMP1-203ENST00000421664 SBF1O95248 1867 aa20.68■□□□□ 0.9
EFEMP1-203ENST00000421664 ITGA6P23229 1130 aa20.67■□□□□ 0.9
EFEMP1-203ENST00000421664 PRELPP51888 382 aa20.67■□□□□ 0.9
EFEMP1-203ENST00000421664 TAOK3Q9H2K8 898 aa20.67■□□□□ 0.9
EFEMP1-203ENST00000421664 DUOX1Q9NRD9 1551 aa20.67■□□□□ 0.9
EFEMP1-203ENST00000421664 SPEF2Q9C093 1822 aa20.67■□□□□ 0.9
EFEMP1-203ENST00000421664 FKBP4Q02790 459 aaKnown RBP eCLIP20.66■□□□□ 0.9
EFEMP1-203ENST00000421664 ANKRD18AQ8IVF6 992 aa20.66■□□□□ 0.9
EFEMP1-203ENST00000421664 PSMD1Q99460 953 aa20.66■□□□□ 0.9
EFEMP1-203ENST00000421664 PLIN1O60240 522 aa20.65■□□□□ 0.9
EFEMP1-203ENST00000421664 GNAI3P08754 354 aa20.65■□□□□ 0.9
EFEMP1-203ENST00000421664 MS4A1P11836 297 aa20.65■□□□□ 0.9
EFEMP1-203ENST00000421664 PANK1Q8TE04 598 aa20.65■□□□□ 0.9
EFEMP1-203ENST00000421664 ANKRD18BA2A2Z9 1011 aa20.64■□□□□ 0.89
EFEMP1-203ENST00000421664 LMNB1P20700 586 aa20.64■□□□□ 0.89
EFEMP1-203ENST00000421664 IFIT5Q13325 482 aaKnown RBP20.64■□□□□ 0.89
EFEMP1-203ENST00000421664 TMX4Q9H1E5 349 aaPredicted RBP20.64■□□□□ 0.89
EFEMP1-203ENST00000421664 CHMP3Q9Y3E7 222 aa20.64■□□□□ 0.89
EFEMP1-203ENST00000421664 ITPRIPQ8IWB1 547 aa20.63■□□□□ 0.89
EFEMP1-203ENST00000421664 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.63■□□□□ 0.89
EFEMP1-203ENST00000421664 RTFDC1Q9BY42 306 aaPredicted RBP20.63■□□□□ 0.89
EFEMP1-203ENST00000421664 BSDC1Q9NW68 430 aaPredicted RBP20.63■□□□□ 0.89
EFEMP1-203ENST00000421664 HDAC5Q9UQL6 1122 aa20.63■□□□□ 0.89
EFEMP1-203ENST00000421664 LRRFIP2Q9Y608 721 aaKnown RBP20.63■□□□□ 0.89
EFEMP1-203ENST00000421664 TIAM2Q8IVF5 1701 aa20.62■□□□□ 0.89
EFEMP1-203ENST00000421664 CCDC57Q2TAC2 916 aa20.62■□□□□ 0.89
EFEMP1-203ENST00000421664 C9orf131Q5VYM1 1079 aa20.62■□□□□ 0.89
EFEMP1-203ENST00000421664 DICER1Q9UPY3 1922 aaKnown RBP20.61■□□□□ 0.89
EFEMP1-203ENST00000421664 IGHMBP2P38935 993 aaKnown RBP20.61■□□□□ 0.89
EFEMP1-203ENST00000421664 PDE3AQ14432 1141 aa20.61■□□□□ 0.89
EFEMP1-203ENST00000421664 DPP8Q6V1X1 898 aaPredicted RBP20.61■□□□□ 0.89
EFEMP1-203ENST00000421664 MPNDQ8N594 471 aa20.61■□□□□ 0.89
EFEMP1-203ENST00000421664 RNF181Q9P0P0 153 aa20.61■□□□□ 0.89
EFEMP1-203ENST00000421664 CCDC88AQ3V6T2 1871 aa20.6■□□□□ 0.89
EFEMP1-203ENST00000421664 ZBTB7BO15156 539 aaPredicted RBP20.6■□□□□ 0.89
EFEMP1-203ENST00000421664 YY1P25490 414 aa20.6■□□□□ 0.89
EFEMP1-203ENST00000421664 GPSM2P81274 684 aa20.6■□□□□ 0.89
EFEMP1-203ENST00000421664 ZNF277Q9NRM2 450 aaPredicted RBP20.6■□□□□ 0.89
EFEMP1-203ENST00000421664 PODXL2Q9NZ53 605 aa20.6■□□□□ 0.89
EFEMP1-203ENST00000421664 A0A1B0GUL6 1792 aa20.59■□□□□ 0.89
EFEMP1-203ENST00000421664 COL4A5P29400 1685 aa20.59■□□□□ 0.89
EFEMP1-203ENST00000421664 MVPQ14764 893 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms