RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 NOM1Q5C9Z4 860 aaKnown RBP7.72□□□□□ -1.17
HDAC8-212ENST00000421523 RBM26Q5T8P6 1007 aaKnown RBP7.72□□□□□ -1.17
HDAC8-212ENST00000421523 AEBP1Q8IUX7 1158 aa7.72□□□□□ -1.17
HDAC8-212ENST00000421523 ARMC5Q96C12 935 aa7.72□□□□□ -1.17
HDAC8-212ENST00000421523 POLKQ9UBT6 870 aa7.72□□□□□ -1.17
HDAC8-212ENST00000421523 CC2D2BQ6DHV5 1058 aa7.71□□□□□ -1.18
HDAC8-212ENST00000421523 MOB2Q70IA6 237 aa7.71□□□□□ -1.18
HDAC8-212ENST00000421523 DZIP3Q86Y13 1208 aaKnown RBP7.71□□□□□ -1.18
HDAC8-212ENST00000421523 CDCA5Q96FF9 252 aa7.71□□□□□ -1.18
HDAC8-212ENST00000421523 PRO3102Q9H379 93 aa7.71□□□□□ -1.18
HDAC8-212ENST00000421523 LGR6Q9HBX8 967 aa7.71□□□□□ -1.18
HDAC8-212ENST00000421523 STXBP5LQ9Y2K9 1186 aa7.71□□□□□ -1.18
HDAC8-212ENST00000421523 PTPN22Q9Y2R2 807 aa7.71□□□□□ -1.18
HDAC8-212ENST00000421523 ZBTB12Q9Y330 459 aaPredicted RBP7.71□□□□□ -1.18
HDAC8-212ENST00000421523 UBR2Q8IWV8 1755 aa7.7□□□□□ -1.18
HDAC8-212ENST00000421523 PPEF1O14829 653 aaPredicted RBP7.7□□□□□ -1.18
HDAC8-212ENST00000421523 GTF2E1P29083 439 aaPredicted RBP7.7□□□□□ -1.18
HDAC8-212ENST00000421523 PLA2G5P39877 138 aa7.7□□□□□ -1.18
HDAC8-212ENST00000421523 IL6STP40189 918 aaPredicted RBP7.7□□□□□ -1.18
HDAC8-212ENST00000421523 PIP4K2AP48426 406 aaPredicted RBP7.7□□□□□ -1.18
HDAC8-212ENST00000421523 TNIP1Q15025 636 aa7.7□□□□□ -1.18
HDAC8-212ENST00000421523 TPTE2Q6XPS3 522 aa7.7□□□□□ -1.18
HDAC8-212ENST00000421523 SULF1Q8IWU6 871 aa7.7□□□□□ -1.18
HDAC8-212ENST00000421523 VSIG10Q8N0Z9 540 aa7.7□□□□□ -1.18
HDAC8-212ENST00000421523 RPGRQ92834 1020 aaKnown RBP7.7□□□□□ -1.18
HDAC8-212ENST00000421523 GGA3Q9NZ52 723 aa7.7□□□□□ -1.18
HDAC8-212ENST00000421523 ABCC12Q96J65 1359 aa7.7□□□□□ -1.18
HDAC8-212ENST00000421523 ZNF609O15014 1411 aa7.69□□□□□ -1.18
HDAC8-212ENST00000421523 WTIPA6NIX2 430 aaPredicted RBP7.69□□□□□ -1.18
HDAC8-212ENST00000421523 SREBF2Q12772 1141 aa7.69□□□□□ -1.18
HDAC8-212ENST00000421523 TTC5Q8N0Z6 440 aa7.69□□□□□ -1.18
HDAC8-212ENST00000421523 CD99L2Q8TCZ2 262 aa7.69□□□□□ -1.18
HDAC8-212ENST00000421523 FAM122AQ96E09 287 aa7.69□□□□□ -1.18
HDAC8-212ENST00000421523 ZNF333Q96JL9 665 aa7.69□□□□□ -1.18
HDAC8-212ENST00000421523 NIP7Q9Y221 180 aaKnown RBP eCLIP7.69□□□□□ -1.18
HDAC8-212ENST00000421523 ASTN2O75129 1339 aaPredicted RBP7.69□□□□□ -1.18
HDAC8-212ENST00000421523 ERBB4Q15303 1308 aa7.69□□□□□ -1.18
HDAC8-212ENST00000421523 PRAMEF22A3QJZ6 481 aa7.68□□□□□ -1.18
HDAC8-212ENST00000421523 UBE2Q2LH0YL09 131 aa7.68□□□□□ -1.18
HDAC8-212ENST00000421523 A1BGP04217 495 aa7.68□□□□□ -1.18
HDAC8-212ENST00000421523 TM4SF4P48230 202 aa7.68□□□□□ -1.18
HDAC8-212ENST00000421523 SLC9C1Q4G0N8 1177 aa7.68□□□□□ -1.18
HDAC8-212ENST00000421523 ANKRD13DQ6ZTN6 518 aa7.68□□□□□ -1.18
HDAC8-212ENST00000421523 NUTM1Q86Y26 1132 aa7.68□□□□□ -1.18
HDAC8-212ENST00000421523 SPINK5Q9NQ38 1064 aaPredicted RBP7.68□□□□□ -1.18
HDAC8-212ENST00000421523 ZNF652Q9Y2D9 606 aa7.68□□□□□ -1.18
HDAC8-212ENST00000421523 CACNA1AO00555 2505 aa7.67□□□□□ -1.18
HDAC8-212ENST00000421523 YDJCA8MPS7 323 aa7.67□□□□□ -1.18
HDAC8-212ENST00000421523 HSPA5P11021 654 aaKnown RBP7.67□□□□□ -1.18
HDAC8-212ENST00000421523 TTLL12Q14166 644 aaPredicted RBP7.67□□□□□ -1.18
HDAC8-212ENST00000421523 CRY2Q49AN0 593 aa7.67□□□□□ -1.18
HDAC8-212ENST00000421523 GRIPAP1Q4V328 841 aa7.67□□□□□ -1.18
HDAC8-212ENST00000421523 POTEHQ6S545 545 aa7.67□□□□□ -1.18
HDAC8-212ENST00000421523 TMX4Q9H1E5 349 aaPredicted RBP7.67□□□□□ -1.18
HDAC8-212ENST00000421523 PANK3Q9H999 370 aa7.67□□□□□ -1.18
HDAC8-212ENST00000421523 EFCC1Q9HA90 598 aa7.67□□□□□ -1.18
HDAC8-212ENST00000421523 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.67□□□□□ -1.18
HDAC8-212ENST00000421523 SCAF8Q9UPN6 1271 aaKnown RBP7.67□□□□□ -1.18
HDAC8-212ENST00000421523 A0A1W2PPC1 479 aa7.66□□□□□ -1.18
HDAC8-212ENST00000421523 RNMTO43148 476 aaKnown RBP7.66□□□□□ -1.18
HDAC8-212ENST00000421523 EIF4G2P78344 907 aaKnown RBP eCLIP7.66□□□□□ -1.18
HDAC8-212ENST00000421523 KIF4BQ2VIQ3 1234 aa7.66□□□□□ -1.18
HDAC8-212ENST00000421523 ERO1AQ96HE7 468 aa7.66□□□□□ -1.18
HDAC8-212ENST00000421523 ZNF496Q96IT1 587 aaPredicted RBP7.66□□□□□ -1.18
HDAC8-212ENST00000421523 CFHR5Q9BXR6 569 aa7.66□□□□□ -1.18
HDAC8-212ENST00000421523 PCGF6Q9BYE7 350 aa7.66□□□□□ -1.18
HDAC8-212ENST00000421523 U3KPZ7 1027 aaPredicted RBP7.66□□□□□ -1.18
HDAC8-212ENST00000421523 PSMD14O00487 310 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 FKBP1BP68106 108 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 CAP1Q01518 475 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 ANGEL2Q5VTE6 544 aaKnown RBP7.65□□□□□ -1.18
HDAC8-212ENST00000421523 PRAMEF18Q5VWM3 479 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 SULT6B1Q6IMI4 303 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 CLEC4GQ6UXB4 293 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 DPP8Q6V1X1 898 aaPredicted RBP7.65□□□□□ -1.18
HDAC8-212ENST00000421523 NBPF11Q86T75 865 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 SUPT20HQ8NEM7 779 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 MTMR10Q9NXD2 777 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 STAP2Q9UGK3 403 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 HEG1Q9ULI3 1381 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 NR2E3Q9Y5X4 410 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 PTCH2Q9Y6C5 1203 aa7.65□□□□□ -1.18
HDAC8-212ENST00000421523 RIC1Q4ADV7 1423 aa7.64□□□□□ -1.19
HDAC8-212ENST00000421523 ZBTB7BO15156 539 aaPredicted RBP7.64□□□□□ -1.19
HDAC8-212ENST00000421523 HOXA10P31260 410 aaPredicted RBP7.64□□□□□ -1.19
HDAC8-212ENST00000421523 KIAA2012Q0VF49 1180 aa7.64□□□□□ -1.19
HDAC8-212ENST00000421523 AMER1Q5JTC6 1135 aaPredicted RBP7.64□□□□□ -1.19
HDAC8-212ENST00000421523 SH3TC2Q8TF17 1288 aa7.64□□□□□ -1.19
HDAC8-212ENST00000421523 DPF2Q92785 391 aa7.64□□□□□ -1.19
HDAC8-212ENST00000421523 SHISA4Q96DD7 197 aa7.64□□□□□ -1.19
HDAC8-212ENST00000421523 RBM17Q96I25 401 aaKnown RBP7.64□□□□□ -1.19
HDAC8-212ENST00000421523 VPS33BQ9H267 617 aa7.64□□□□□ -1.19
HDAC8-212ENST00000421523 KDM3BQ7LBC6 1761 aa7.64□□□□□ -1.19
HDAC8-212ENST00000421523 CDH23Q9H251 3354 aa7.63□□□□□ -1.19
HDAC8-212ENST00000421523 KIF7Q2M1P5 1343 aa7.63□□□□□ -1.19
HDAC8-212ENST00000421523 RPTORQ8N122 1335 aa7.63□□□□□ -1.19
HDAC8-212ENST00000421523 TMEM265A0A087WTH1 108 aa7.63□□□□□ -1.19
HDAC8-212ENST00000421523 PER1O15534 1290 aaPredicted RBP7.63□□□□□ -1.19
HDAC8-212ENST00000421523 ECM2O94769 699 aaPredicted RBP7.63□□□□□ -1.19
HDAC8-212ENST00000421523 ALDH1A1P00352 501 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms