RNA–Protein interactions for RNA: ENST00000420964.1

FAAP20-208, Transcript of FA core complex associated protein 20, humanhuman

TSL 3

Gene FAAP20, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-208ENST00000420964 NLGN1Q8N2Q7 840 aa15.3■□□□□ 0.04
FAAP20-208ENST00000420964 SYT17Q9BSW7 474 aa15.3■□□□□ 0.04
FAAP20-208ENST00000420964 FHDC1Q9C0D6 1143 aaPredicted RBP15.3■□□□□ 0.04
FAAP20-208ENST00000420964 NRXN2Q9P2S2 1712 aa15.3■□□□□ 0.04
FAAP20-208ENST00000420964 PDZRN3Q9UPQ7 1066 aa15.3■□□□□ 0.04
FAAP20-208ENST00000420964 NPHP1O15259 732 aa15.29■□□□□ 0.04
FAAP20-208ENST00000420964 SURF6O75683 361 aaKnown RBP15.29■□□□□ 0.04
FAAP20-208ENST00000420964 CSF1RP07333 972 aa15.29■□□□□ 0.04
FAAP20-208ENST00000420964 TM4SF1P30408 202 aa15.29■□□□□ 0.04
FAAP20-208ENST00000420964 RFX5P48382 616 aaPredicted RBP15.29■□□□□ 0.04
FAAP20-208ENST00000420964 DDR1Q08345 913 aa15.29■□□□□ 0.04
FAAP20-208ENST00000420964 CNBD1Q8NA66 436 aa15.29■□□□□ 0.04
FAAP20-208ENST00000420964 TTLL11Q8NHH1 800 aa15.29■□□□□ 0.04
FAAP20-208ENST00000420964 PA2G4Q9UQ80 394 aaKnown RBP15.29■□□□□ 0.04
FAAP20-208ENST00000420964 NOP58Q9Y2X3 529 aaKnown RBP15.29■□□□□ 0.04
FAAP20-208ENST00000420964 RIC1Q4ADV7 1423 aa15.28■□□□□ 0.04
FAAP20-208ENST00000420964 APBB1O00213 710 aa15.28■□□□□ 0.04
FAAP20-208ENST00000420964 POLRMTO00411 1230 aaKnown RBP15.28■□□□□ 0.04
FAAP20-208ENST00000420964 HSP90AB4PQ58FF6 505 aa15.28■□□□□ 0.04
FAAP20-208ENST00000420964 ANKRD45Q5TZF3 282 aa15.28■□□□□ 0.04
FAAP20-208ENST00000420964 MSL1Q68DK7 614 aa15.28■□□□□ 0.04
FAAP20-208ENST00000420964 SKAP1Q86WV1 359 aa15.28■□□□□ 0.04
FAAP20-208ENST00000420964 KLHDC4Q8TBB5 520 aa15.28■□□□□ 0.04
FAAP20-208ENST00000420964 CCDC85AQ96PX6 553 aaPredicted RBP15.28■□□□□ 0.04
FAAP20-208ENST00000420964 MTFR1LQ9H019 292 aa15.28■□□□□ 0.04
FAAP20-208ENST00000420964 COPRSQ9NQ92 184 aa15.28■□□□□ 0.04
FAAP20-208ENST00000420964 RTL9Q8NET4 1388 aa15.27■□□□□ 0.04
FAAP20-208ENST00000420964 RAB11FIP3O75154 756 aa15.27■□□□□ 0.04
FAAP20-208ENST00000420964 SERPINB2P05120 415 aa15.27■□□□□ 0.04
FAAP20-208ENST00000420964 OS9Q13438 667 aaPredicted RBP15.27■□□□□ 0.04
FAAP20-208ENST00000420964 CCDC57Q2TAC2 916 aa15.27■□□□□ 0.04
FAAP20-208ENST00000420964 CCDC152Q4G0S7 254 aa15.27■□□□□ 0.04
FAAP20-208ENST00000420964 SLC10A5Q5PT55 438 aa15.27■□□□□ 0.04
FAAP20-208ENST00000420964 PRR5LQ6MZQ0 368 aa15.27■□□□□ 0.04
FAAP20-208ENST00000420964 CHD1LQ86WJ1 897 aa15.27■□□□□ 0.04
FAAP20-208ENST00000420964 GREM2Q9H772 168 aa15.27■□□□□ 0.04
FAAP20-208ENST00000420964 UTRNP46939 3433 aa15.27■□□□□ 0.03
FAAP20-208ENST00000420964 SPEF2Q9C093 1822 aa15.27■□□□□ 0.03
FAAP20-208ENST00000420964 MMP10P09238 476 aa15.26■□□□□ 0.03
FAAP20-208ENST00000420964 ST5P78524 1137 aa15.26■□□□□ 0.03
FAAP20-208ENST00000420964 PTPN12Q05209 780 aaKnown RBP15.26■□□□□ 0.03
FAAP20-208ENST00000420964 IFIT5Q13325 482 aaKnown RBP15.26■□□□□ 0.03
FAAP20-208ENST00000420964 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
FAAP20-208ENST00000420964 LRRCC1Q9C099 1032 aa15.26■□□□□ 0.03
FAAP20-208ENST00000420964 LNPKQ9C0E8 428 aa15.26■□□□□ 0.03
FAAP20-208ENST00000420964 SIL1Q9H173 461 aa15.26■□□□□ 0.03
FAAP20-208ENST00000420964 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
FAAP20-208ENST00000420964 ANKRD18BA2A2Z9 1011 aa15.25■□□□□ 0.03
FAAP20-208ENST00000420964 ITGA6P23229 1130 aa15.25■□□□□ 0.03
FAAP20-208ENST00000420964 G3BP1Q13283 466 aaKnown RBP eCLIP15.25■□□□□ 0.03
FAAP20-208ENST00000420964 TAF7LQ5H9L4 462 aa15.25■□□□□ 0.03
FAAP20-208ENST00000420964 ERC1Q8IUD2 1116 aa15.25■□□□□ 0.03
FAAP20-208ENST00000420964 CCDC24Q8N4L8 307 aa15.25■□□□□ 0.03
FAAP20-208ENST00000420964 ANKRD31Q8N7Z5 1873 aa15.25■□□□□ 0.03
FAAP20-208ENST00000420964 SMARCA5O60264 1052 aaPredicted RBP15.24■□□□□ 0.03
FAAP20-208ENST00000420964 RGS3P49796 1198 aa15.24■□□□□ 0.03
FAAP20-208ENST00000420964 SF3B3Q15393 1217 aaKnown RBP15.24■□□□□ 0.03
FAAP20-208ENST00000420964 RHPN1Q8TCX5 695 aa15.24■□□□□ 0.03
FAAP20-208ENST00000420964 KIF1BPQ96EK5 621 aa15.24■□□□□ 0.03
FAAP20-208ENST00000420964 ZNF594Q96JF6 807 aaPredicted RBP15.24■□□□□ 0.03
FAAP20-208ENST00000420964 PARP3Q9Y6F1 533 aa15.24■□□□□ 0.03
FAAP20-208ENST00000420964 PDE4AP27815 886 aa15.23■□□□□ 0.03
FAAP20-208ENST00000420964 NLRP3Q96P20 1036 aa15.23■□□□□ 0.03
FAAP20-208ENST00000420964 COL4A1P02462 1669 aa15.22■□□□□ 0.03
FAAP20-208ENST00000420964 EYA2O00167 538 aa15.22■□□□□ 0.03
FAAP20-208ENST00000420964 CIAO1O76071 339 aa15.22■□□□□ 0.03
FAAP20-208ENST00000420964 SLC16A10Q8TF71 515 aa15.22■□□□□ 0.03
FAAP20-208ENST00000420964 TAF1P21675 1872 aa15.21■□□□□ 0.03
FAAP20-208ENST00000420964 COL11A2P13942 1736 aaPredicted RBP15.21■□□□□ 0.03
FAAP20-208ENST00000420964 SASH1O94885 1247 aa15.21■□□□□ 0.03
FAAP20-208ENST00000420964 IL15P40933 162 aaPredicted RBP15.21■□□□□ 0.03
FAAP20-208ENST00000420964 BCL11AQ9H165 835 aa15.21■□□□□ 0.03
FAAP20-208ENST00000420964 IL1RAPL2Q9NP60 686 aa15.21■□□□□ 0.03
FAAP20-208ENST00000420964 SEC31BQ9NQW1 1179 aa15.21■□□□□ 0.03
FAAP20-208ENST00000420964 FBXO3Q9UK99 471 aa15.21■□□□□ 0.03
FAAP20-208ENST00000420964 LRRC24Q50LG9 513 aa15.2■□□□□ 0.02
FAAP20-208ENST00000420964 ATG9AQ7Z3C6 839 aa15.2■□□□□ 0.02
FAAP20-208ENST00000420964 PELP1Q8IZL8 1130 aaKnown RBP15.2■□□□□ 0.02
FAAP20-208ENST00000420964 CDC5LQ99459 802 aaKnown RBP15.2■□□□□ 0.02
FAAP20-208ENST00000420964 PUS3Q9BZE2 481 aaKnown RBP15.2■□□□□ 0.02
FAAP20-208ENST00000420964 A0A1B0GUL6 1792 aa15.2■□□□□ 0.02
FAAP20-208ENST00000420964 IGHMBP2P38935 993 aaKnown RBP15.19■□□□□ 0.02
FAAP20-208ENST00000420964 TFCP2Q12800 502 aa15.19■□□□□ 0.02
FAAP20-208ENST00000420964 CRY2Q49AN0 593 aa15.19■□□□□ 0.02
FAAP20-208ENST00000420964 OTUD7AQ8TE49 926 aaPredicted RBP15.19■□□□□ 0.02
FAAP20-208ENST00000420964 CNNM1Q9NRU3 951 aa15.19■□□□□ 0.02
FAAP20-208ENST00000420964 ZNF609O15014 1411 aa15.18■□□□□ 0.02
FAAP20-208ENST00000420964 LDHAL6AQ6ZMR3 332 aa15.18■□□□□ 0.02
FAAP20-208ENST00000420964 DDX46Q7L014 1031 aaKnown RBP15.18■□□□□ 0.02
FAAP20-208ENST00000420964 ANKRD18AQ8IVF6 992 aa15.18■□□□□ 0.02
FAAP20-208ENST00000420964 C16orf71Q8IYS4 520 aaPredicted RBP15.18■□□□□ 0.02
FAAP20-208ENST00000420964 CLASRPQ8N2M8 674 aaKnown RBP15.18■□□□□ 0.02
FAAP20-208ENST00000420964 RPGRQ92834 1020 aaKnown RBP15.18■□□□□ 0.02
FAAP20-208ENST00000420964 MPHOSPH8Q99549 860 aa15.18■□□□□ 0.02
FAAP20-208ENST00000420964 BRIP1Q9BX63 1249 aa15.18■□□□□ 0.02
FAAP20-208ENST00000420964 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.18■□□□□ 0.02
FAAP20-208ENST00000420964 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
FAAP20-208ENST00000420964 AACSQ86V21 672 aa15.17■□□□□ 0.02
FAAP20-208ENST00000420964 PLEKHM2Q8IWE5 1019 aa15.17■□□□□ 0.02
FAAP20-208ENST00000420964 ZNF784Q8NCA9 323 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms