RNA–Protein interactions for RNA: ENST00000420940.6

WDR48-203, Transcript of WD repeat domain 48, humanhuman

TSL 1 (best)

Gene WDR48, Length 3,772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-203ENST00000420940 SRCIN1Q9C0H9 1055 aa6.98□□□□□ -1.29
WDR48-203ENST00000420940 NDUFB9Q9Y6M9 179 aa6.98□□□□□ -1.29
WDR48-203ENST00000420940 TTC41PQ6P2S7 1318 aa6.98□□□□□ -1.29
WDR48-203ENST00000420940 NHSQ6T4R5 1651 aa6.98□□□□□ -1.29
WDR48-203ENST00000420940 RGPD3A6NKT7 1758 aaPredicted RBP6.98□□□□□ -1.29
WDR48-203ENST00000420940 RGPD4Q7Z3J3 1758 aa6.98□□□□□ -1.29
WDR48-203ENST00000420940 ALDH1L1O75891 902 aa6.98□□□□□ -1.29
WDR48-203ENST00000420940 MKRN4PQ13434 485 aaPredicted RBP6.98□□□□□ -1.29
WDR48-203ENST00000420940 UPF3BQ9BZI7 483 aaKnown RBP6.98□□□□□ -1.29
WDR48-203ENST00000420940 ALDH8A1Q9H2A2 487 aaPredicted RBP6.98□□□□□ -1.29
WDR48-203ENST00000420940 DBF4Q9UBU7 674 aaPredicted RBP6.98□□□□□ -1.29
WDR48-203ENST00000420940 TPCN1Q9ULQ1 816 aa6.98□□□□□ -1.29
WDR48-203ENST00000420940 PCNTO95613 3336 aa6.98□□□□□ -1.29
WDR48-203ENST00000420940 RAB11FIP3O75154 756 aa6.98□□□□□ -1.29
WDR48-203ENST00000420940 AMOTQ4VCS5 1084 aa6.98□□□□□ -1.29
WDR48-203ENST00000420940 THSD7AQ9UPZ6 1657 aa6.97□□□□□ -1.29
WDR48-203ENST00000420940 ME3Q16798 604 aa6.97□□□□□ -1.29
WDR48-203ENST00000420940 RTF1Q92541 710 aaKnown RBP6.97□□□□□ -1.29
WDR48-203ENST00000420940 LARP6Q9BRS8 491 aaKnown RBP6.97□□□□□ -1.29
WDR48-203ENST00000420940 SPG7Q9UQ90 795 aa6.97□□□□□ -1.29
WDR48-203ENST00000420940 DDX49Q9Y6V7 483 aaKnown RBP6.97□□□□□ -1.29
WDR48-203ENST00000420940 GRM8O00222 908 aa6.97□□□□□ -1.29
WDR48-203ENST00000420940 CTDNEP1O95476 244 aa6.97□□□□□ -1.29
WDR48-203ENST00000420940 UBTFL1P0CB47 393 aaPredicted RBP6.97□□□□□ -1.29
WDR48-203ENST00000420940 AGXT2Q9BYV1 514 aa6.97□□□□□ -1.29
WDR48-203ENST00000420940 SYCE3A1L190 88 aa6.97□□□□□ -1.29
WDR48-203ENST00000420940 LINS1Q8NG48 757 aa6.97□□□□□ -1.29
WDR48-203ENST00000420940 METTL22Q9BUU2 404 aaPredicted RBP6.97□□□□□ -1.29
WDR48-203ENST00000420940 COPRSQ9NQ92 184 aa6.97□□□□□ -1.29
WDR48-203ENST00000420940 PODXL2Q9NZ53 605 aa6.97□□□□□ -1.29
WDR48-203ENST00000420940 H7C1W4 665 aa6.96□□□□□ -1.29
WDR48-203ENST00000420940 PRPF40AO75400 957 aaKnown RBP6.96□□□□□ -1.29
WDR48-203ENST00000420940 ZMYND15Q9H091 742 aa6.96□□□□□ -1.29
WDR48-203ENST00000420940 FOCADQ5VW36 1801 aa6.96□□□□□ -1.29
WDR48-203ENST00000420940 REC8O95072 547 aa6.96□□□□□ -1.3
WDR48-203ENST00000420940 EIF2S2P20042 333 aaKnown RBP6.96□□□□□ -1.3
WDR48-203ENST00000420940 MCM2P49736 904 aa6.96□□□□□ -1.3
WDR48-203ENST00000420940 PSME1Q06323 249 aa6.96□□□□□ -1.3
WDR48-203ENST00000420940 VGLL2Q8N8G2 317 aa6.96□□□□□ -1.3
WDR48-203ENST00000420940 FAM53CQ9NYF3 392 aa6.96□□□□□ -1.3
WDR48-203ENST00000420940 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.96□□□□□ -1.3
WDR48-203ENST00000420940 COL1A1P02452 1464 aaPredicted RBP6.96□□□□□ -1.3
WDR48-203ENST00000420940 ATRNO75882 1429 aa6.96□□□□□ -1.3
WDR48-203ENST00000420940 RFX7Q2KHR2 1363 aa6.96□□□□□ -1.3
WDR48-203ENST00000420940 CTIFO43310 598 aaKnown RBP6.96□□□□□ -1.3
WDR48-203ENST00000420940 JARID2Q92833 1246 aaPredicted RBP6.96□□□□□ -1.3
WDR48-203ENST00000420940 KIF1BPQ96EK5 621 aa6.96□□□□□ -1.3
WDR48-203ENST00000420940 MTMR6Q9Y217 621 aa6.96□□□□□ -1.3
WDR48-203ENST00000420940 BCL9O00512 1426 aa6.96□□□□□ -1.3
WDR48-203ENST00000420940 CCDC171Q6TFL3 1326 aa6.96□□□□□ -1.3
WDR48-203ENST00000420940 TAF5LO75529 589 aa6.95□□□□□ -1.3
WDR48-203ENST00000420940 PIBF1Q8WXW3 757 aa6.95□□□□□ -1.3
WDR48-203ENST00000420940 SEC62Q99442 399 aaKnown RBP6.95□□□□□ -1.3
WDR48-203ENST00000420940 WDR17Q8IZU2 1322 aa6.95□□□□□ -1.3
WDR48-203ENST00000420940 NEK4P51957 841 aa6.95□□□□□ -1.3
WDR48-203ENST00000420940 ZC3H6P61129 1189 aaKnown RBP6.95□□□□□ -1.3
WDR48-203ENST00000420940 CHRNA2Q15822 529 aa6.95□□□□□ -1.3
WDR48-203ENST00000420940 TTLL7Q6ZT98 887 aa6.95□□□□□ -1.3
WDR48-203ENST00000420940 USP48Q86UV5 1035 aa6.95□□□□□ -1.3
WDR48-203ENST00000420940 XAGE3Q8WTP9 111 aa6.95□□□□□ -1.3
WDR48-203ENST00000420940 NMIQ13287 307 aaPredicted RBP6.95□□□□□ -1.3
WDR48-203ENST00000420940 ANKRD7Q92527 254 aa6.95□□□□□ -1.3
WDR48-203ENST00000420940 MAST2Q6P0Q8 1798 aa6.95□□□□□ -1.3
WDR48-203ENST00000420940 QSER1Q2KHR3 1735 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 SLC27A2O14975 620 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 SURF6O75683 361 aaKnown RBP6.94□□□□□ -1.3
WDR48-203ENST00000420940 VPS53Q5VIR6 699 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.94□□□□□ -1.3
WDR48-203ENST00000420940 MYRIPQ8NFW9 859 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 TM6SF1Q9BZW5 370 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 MYH2Q9UKX2 1941 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 DYNC1I1O14576 645 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 ST18O60284 1047 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 MBD3O95983 291 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 HSP90AA1P07900 732 aaKnown RBP6.94□□□□□ -1.3
WDR48-203ENST00000420940 SYT1P21579 422 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 HSP90AA2PQ14568 343 aaPredicted RBP6.94□□□□□ -1.3
WDR48-203ENST00000420940 UVSSAQ2YD98 709 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 COPS6Q7L5N1 327 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 STK31Q9BXU1 1019 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 GDPD2Q9HCC8 539 aa6.94□□□□□ -1.3
WDR48-203ENST00000420940 ZSCAN20P17040 1043 aaPredicted RBP6.94□□□□□ -1.3
WDR48-203ENST00000420940 HAP1P54257 671 aaPredicted RBP6.94□□□□□ -1.3
WDR48-203ENST00000420940 PLEKHO1Q53GL0 409 aaPredicted RBP6.94□□□□□ -1.3
WDR48-203ENST00000420940 MYH13Q9UKX3 1938 aa6.93□□□□□ -1.3
WDR48-203ENST00000420940 DENND2AQ9ULE3 1009 aa6.93□□□□□ -1.3
WDR48-203ENST00000420940 BTAF1O14981 1849 aa6.93□□□□□ -1.3
WDR48-203ENST00000420940 SCARF1Q14162 830 aa6.93□□□□□ -1.3
WDR48-203ENST00000420940 CWC27Q6UX04 472 aaKnown RBP6.93□□□□□ -1.3
WDR48-203ENST00000420940 SYNE4Q8N205 404 aa6.93□□□□□ -1.3
WDR48-203ENST00000420940 SHISA4Q96DD7 197 aa6.93□□□□□ -1.3
WDR48-203ENST00000420940 NAP1L5Q96NT1 182 aaPredicted RBP6.93□□□□□ -1.3
WDR48-203ENST00000420940 ELP1O95163 1332 aa6.93□□□□□ -1.3
WDR48-203ENST00000420940 HMMRO75330 724 aa6.93□□□□□ -1.3
WDR48-203ENST00000420940 HMGN5P82970 282 aaKnown RBP6.93□□□□□ -1.3
WDR48-203ENST00000420940 EXOSC10Q01780 885 aaKnown RBP6.93□□□□□ -1.3
WDR48-203ENST00000420940 CREB3L3Q68CJ9 461 aa6.93□□□□□ -1.3
WDR48-203ENST00000420940 KIAA1524Q8TCG1 905 aa6.93□□□□□ -1.3
WDR48-203ENST00000420940 ISCA1Q9BUE6 129 aa6.93□□□□□ -1.3
WDR48-203ENST00000420940 ECHDC1Q9NTX5 307 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms