RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 ARHGEF1Q92888 912 aaKnown RBP8.96□□□□□ -0.98
BDNF-209ENST00000420794 NOL10Q9BSC4 688 aaKnown RBP8.96□□□□□ -0.98
BDNF-209ENST00000420794 C22orf23Q9BZE7 217 aa8.96□□□□□ -0.98
BDNF-209ENST00000420794 COL18A1P39060 1754 aa8.96□□□□□ -0.98
BDNF-209ENST00000420794 RNF20Q5VTR2 975 aa8.96□□□□□ -0.98
BDNF-209ENST00000420794 INTS5Q6P9B9 1019 aaKnown RBP8.96□□□□□ -0.98
BDNF-209ENST00000420794 PPP1R1BQ9UD71 204 aaPredicted RBP8.96□□□□□ -0.98
BDNF-209ENST00000420794 ATRNO75882 1429 aa8.95□□□□□ -0.98
BDNF-209ENST00000420794 EVI5LQ96CN4 794 aa8.95□□□□□ -0.98
BDNF-209ENST00000420794 SRP68Q9UHB9 627 aaKnown RBP8.95□□□□□ -0.98
BDNF-209ENST00000420794 IBTKQ9P2D0 1353 aaPredicted RBP8.95□□□□□ -0.98
BDNF-209ENST00000420794 POLA2Q14181 598 aa8.95□□□□□ -0.98
BDNF-209ENST00000420794 SUSD4Q5VX71 490 aa8.95□□□□□ -0.98
BDNF-209ENST00000420794 NOP58Q9Y2X3 529 aaKnown RBP8.95□□□□□ -0.98
BDNF-209ENST00000420794 MARF1Q9Y4F3 1742 aaKnown RBP8.95□□□□□ -0.98
BDNF-209ENST00000420794 UQCRFS1P1P0C7P4 283 aa8.95□□□□□ -0.98
BDNF-209ENST00000420794 CDHR2Q9BYE9 1310 aa8.95□□□□□ -0.98
BDNF-209ENST00000420794 ST18O60284 1047 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 ZNF594Q96JF6 807 aaPredicted RBP8.94□□□□□ -0.98
BDNF-209ENST00000420794 ANKRD2Q9GZV1 360 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 LRP6O75581 1613 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 CAMTA2O94983 1202 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 RBM17Q96I25 401 aaKnown RBP8.94□□□□□ -0.98
BDNF-209ENST00000420794 PDIA4P13667 645 aaKnown RBP8.94□□□□□ -0.98
BDNF-209ENST00000420794 POLD1P28340 1107 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 TNNI3KQ59H18 835 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 ZNF622Q969S3 477 aaKnown RBP eCLIP8.94□□□□□ -0.98
BDNF-209ENST00000420794 SLC4A9Q96Q91 983 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 FPGT-TNNI3KV9GXZ4 949 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 MRC1P22897 1456 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 AOX1Q06278 1338 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 MROH5Q6ZUA9 1318 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 APPP05067 770 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 TSHZ3Q63HK5 1081 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 ZNF34Q8IZ26 560 aa8.94□□□□□ -0.98
BDNF-209ENST00000420794 TTF1Q15361 905 aaPredicted RBP8.93□□□□□ -0.98
BDNF-209ENST00000420794 FBXW7Q969H0 707 aa8.93□□□□□ -0.98
BDNF-209ENST00000420794 UTYO14607 1347 aa8.93□□□□□ -0.98
BDNF-209ENST00000420794 CIAO1O76071 339 aa8.93□□□□□ -0.98
BDNF-209ENST00000420794 SERPINB2P05120 415 aa8.93□□□□□ -0.98
BDNF-209ENST00000420794 SDSP20132 328 aa8.93□□□□□ -0.98
BDNF-209ENST00000420794 GREM2Q9H772 168 aa8.93□□□□□ -0.98
BDNF-209ENST00000420794 A0A1B0GUL7 405 aa8.93□□□□□ -0.98
BDNF-209ENST00000420794 PLSCR1O15162 318 aa8.93□□□□□ -0.98
BDNF-209ENST00000420794 RPS8P62241 208 aaKnown RBP8.93□□□□□ -0.98
BDNF-209ENST00000420794 CWC27Q6UX04 472 aaKnown RBP8.93□□□□□ -0.98
BDNF-209ENST00000420794 LRP2BPQ9P2M1 347 aa8.93□□□□□ -0.98
BDNF-209ENST00000420794 PUM3Q15397 648 aaKnown RBP8.92□□□□□ -0.98
BDNF-209ENST00000420794 TTLL11Q8NHH1 800 aa8.92□□□□□ -0.98
BDNF-209ENST00000420794 C6orf229H3BNL8 230 aa8.92□□□□□ -0.98
BDNF-209ENST00000420794 RGL2O15211 777 aa8.92□□□□□ -0.98
BDNF-209ENST00000420794 IDH1O75874 414 aaKnown RBP8.92□□□□□ -0.98
BDNF-209ENST00000420794 PTPN12Q05209 780 aaKnown RBP8.92□□□□□ -0.98
BDNF-209ENST00000420794 EN1Q05925 392 aaPredicted RBP8.92□□□□□ -0.98
BDNF-209ENST00000420794 ERFEQ4G0M1 354 aa8.92□□□□□ -0.98
BDNF-209ENST00000420794 EPHA10Q5JZY3 1008 aa8.92□□□□□ -0.98
BDNF-209ENST00000420794 TBC1D9BQ66K14 1250 aa8.92□□□□□ -0.98
BDNF-209ENST00000420794 CCDC24Q8N4L8 307 aa8.92□□□□□ -0.98
BDNF-209ENST00000420794 HELBQ8NG08 1087 aaPredicted RBP8.92□□□□□ -0.98
BDNF-209ENST00000420794 PDE6BP35913 854 aa8.92□□□□□ -0.98
BDNF-209ENST00000420794 TIMM10P62072 90 aa8.92□□□□□ -0.98
BDNF-209ENST00000420794 RABL6Q3YEC7 729 aaPredicted RBP8.92□□□□□ -0.98
BDNF-209ENST00000420794 IPO9Q96P70 1041 aaKnown RBP8.92□□□□□ -0.98
BDNF-209ENST00000420794 PLA2G12BQ9BX93 195 aa8.92□□□□□ -0.98
BDNF-209ENST00000420794 RGS12O14924 1447 aa8.92□□□□□ -0.98
BDNF-209ENST00000420794 GOLIM4O00461 696 aa8.91□□□□□ -0.98
BDNF-209ENST00000420794 MAP3K12Q12852 859 aa8.91□□□□□ -0.98
BDNF-209ENST00000420794 TBC1D9Q6ZT07 1266 aa8.91□□□□□ -0.98
BDNF-209ENST00000420794 AMOTL1Q8IY63 956 aa8.91□□□□□ -0.98
BDNF-209ENST00000420794 OTUD7AQ8TE49 926 aaPredicted RBP8.91□□□□□ -0.98
BDNF-209ENST00000420794 LPIN2Q92539 896 aa8.91□□□□□ -0.98
BDNF-209ENST00000420794 NWD2Q9ULI1 1742 aa8.91□□□□□ -0.98
BDNF-209ENST00000420794 CARMIL3Q8ND23 1372 aa8.91□□□□□ -0.98
BDNF-209ENST00000420794 GPR108Q9NPR9 543 aa8.91□□□□□ -0.98
BDNF-209ENST00000420794 ABCF2Q9UG63 623 aa8.91□□□□□ -0.98
BDNF-209ENST00000420794 NAP1L2Q9ULW6 460 aaPredicted RBP8.91□□□□□ -0.98
BDNF-209ENST00000420794 DBNDD2Q9BQY9 259 aa8.91□□□□□ -0.98
BDNF-209ENST00000420794 ALDH1B1P30837 517 aa8.91□□□□□ -0.98
BDNF-209ENST00000420794 RAI14Q9P0K7 980 aa8.91□□□□□ -0.98
BDNF-209ENST00000420794 NSFL1CQ9UNZ2 370 aaKnown RBP8.91□□□□□ -0.98
BDNF-209ENST00000420794 PLCH1Q4KWH8 1693 aa8.9□□□□□ -0.98
BDNF-209ENST00000420794 H0YIN7 160 aa8.9□□□□□ -0.98
BDNF-209ENST00000420794 LRRC24Q50LG9 513 aa8.9□□□□□ -0.98
BDNF-209ENST00000420794 MSL1Q68DK7 614 aa8.9□□□□□ -0.98
BDNF-209ENST00000420794 POTEAQ6S8J7 498 aa8.9□□□□□ -0.98
BDNF-209ENST00000420794 PTF1AQ7RTS3 328 aa8.9□□□□□ -0.98
BDNF-209ENST00000420794 EAF2Q96CJ1 260 aaPredicted RBP8.9□□□□□ -0.98
BDNF-209ENST00000420794 SNRKQ9NRH2 765 aa8.9□□□□□ -0.98
BDNF-209ENST00000420794 USP42Q9H9J4 1324 aaKnown RBP8.9□□□□□ -0.98
BDNF-209ENST00000420794 FOXO4P98177 505 aa8.9□□□□□ -0.98
BDNF-209ENST00000420794 TRDNQ13061 729 aa8.9□□□□□ -0.98
BDNF-209ENST00000420794 CHAF1AQ13111 956 aaPredicted RBP8.9□□□□□ -0.98
BDNF-209ENST00000420794 CCDC125Q86Z20 511 aa8.9□□□□□ -0.98
BDNF-209ENST00000420794 XAGE2Q96GT9 111 aa8.9□□□□□ -0.98
BDNF-209ENST00000420794 TOMM22Q9NS69 142 aa8.9□□□□□ -0.98
BDNF-209ENST00000420794 ZFYP08048 801 aaPredicted RBP8.9□□□□□ -0.99
BDNF-209ENST00000420794 NFIXQ14938 502 aa8.9□□□□□ -0.99
BDNF-209ENST00000420794 PKD1L3Q7Z443 1732 aa8.9□□□□□ -0.99
BDNF-209ENST00000420794 PSMA5P28066 241 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 SYNE4Q8N205 404 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms