RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 COL4A1P02462 1669 aa20.16■□□□□ 0.82
VAT1-202ENST00000420567 H7C1W4 665 aa20.15■□□□□ 0.82
VAT1-202ENST00000420567 GPBP1L1Q9HC44 474 aaPredicted RBP20.15■□□□□ 0.82
VAT1-202ENST00000420567 SEC31BQ9NQW1 1179 aa20.15■□□□□ 0.82
VAT1-202ENST00000420567 ZNF277Q9NRM2 450 aaPredicted RBP20.15■□□□□ 0.82
VAT1-202ENST00000420567 ATP6V0A2Q9Y487 856 aa20.15■□□□□ 0.82
VAT1-202ENST00000420567 ZBED9Q6R2W3 1325 aa20.15■□□□□ 0.82
VAT1-202ENST00000420567 FER1L6Q2WGJ9 1857 aa20.14■□□□□ 0.81
VAT1-202ENST00000420567 PTPRCP08575 1304 aa20.14■□□□□ 0.81
VAT1-202ENST00000420567 BBOX1O75936 387 aa20.14■□□□□ 0.81
VAT1-202ENST00000420567 CTSWP56202 376 aa20.14■□□□□ 0.81
VAT1-202ENST00000420567 CC2D2BQ6DHV5 1058 aa20.14■□□□□ 0.81
VAT1-202ENST00000420567 CCDC152Q4G0S7 254 aa20.13■□□□□ 0.81
VAT1-202ENST00000420567 TMX4Q9H1E5 349 aaPredicted RBP20.13■□□□□ 0.81
VAT1-202ENST00000420567 RARSP54136 660 aaKnown RBP20.12■□□□□ 0.81
VAT1-202ENST00000420567 CASP7P55210 303 aa20.12■□□□□ 0.81
VAT1-202ENST00000420567 SRCIN1Q9C0H9 1055 aa20.12■□□□□ 0.81
VAT1-202ENST00000420567 TIAM2Q8IVF5 1701 aa20.12■□□□□ 0.81
VAT1-202ENST00000420567 SP8Q8IXZ3 490 aa20.11■□□□□ 0.81
VAT1-202ENST00000420567 PSMD1Q99460 953 aa20.11■□□□□ 0.81
VAT1-202ENST00000420567 CACNA1FO60840 1977 aa20.1■□□□□ 0.81
VAT1-202ENST00000420567 ZC3H4Q9UPT8 1303 aaKnown RBP20.1■□□□□ 0.81
VAT1-202ENST00000420567 ALDH1L1O75891 902 aa20.1■□□□□ 0.81
VAT1-202ENST00000420567 IARSP41252 1262 aaKnown RBP20.1■□□□□ 0.81
VAT1-202ENST00000420567 TTLL11Q8NHH1 800 aa20.1■□□□□ 0.81
VAT1-202ENST00000420567 NOB1Q9ULX3 412 aaKnown RBP20.1■□□□□ 0.81
VAT1-202ENST00000420567 SBF1O95248 1867 aa20.09■□□□□ 0.81
VAT1-202ENST00000420567 GRM8O00222 908 aa20.09■□□□□ 0.81
VAT1-202ENST00000420567 GRIPAP1Q4V328 841 aa20.09■□□□□ 0.81
VAT1-202ENST00000420567 DPP8Q6V1X1 898 aaPredicted RBP20.09■□□□□ 0.81
VAT1-202ENST00000420567 TMC4Q7Z404 712 aa20.09■□□□□ 0.81
VAT1-202ENST00000420567 GREM2Q9H772 168 aa20.09■□□□□ 0.81
VAT1-202ENST00000420567 RPS8P62241 208 aaKnown RBP20.08■□□□□ 0.81
VAT1-202ENST00000420567 MPNDQ8N594 471 aa20.08■□□□□ 0.81
VAT1-202ENST00000420567 PLA2G12BQ9BX93 195 aa20.08■□□□□ 0.81
VAT1-202ENST00000420567 NMRK2Q9NPI5 230 aa20.08■□□□□ 0.81
VAT1-202ENST00000420567 C9orf78Q9NZ63 289 aaPredicted RBP20.08■□□□□ 0.81
VAT1-202ENST00000420567 KDM2BQ8NHM5 1336 aa20.07■□□□□ 0.8
VAT1-202ENST00000420567 FAM161AQ3B820 660 aa20.07■□□□□ 0.8
VAT1-202ENST00000420567 LRRC37AA6NMS7 1700 aa20.06■□□□□ 0.8
VAT1-202ENST00000420567 TAF1P21675 1872 aa20.06■□□□□ 0.8
VAT1-202ENST00000420567 ANKRD18AQ8IVF6 992 aa20.06■□□□□ 0.8
VAT1-202ENST00000420567 COL4A5P29400 1685 aa20.06■□□□□ 0.8
VAT1-202ENST00000420567 KIF16BQ96L93 1317 aa20.05■□□□□ 0.8
VAT1-202ENST00000420567 DUOX1Q9NRD9 1551 aa20.05■□□□□ 0.8
VAT1-202ENST00000420567 GLTPD2A6NH11 291 aa20.05■□□□□ 0.8
VAT1-202ENST00000420567 BCAR3O75815 825 aa20.05■□□□□ 0.8
VAT1-202ENST00000420567 BRPF1P55201 1214 aaPredicted RBP20.05■□□□□ 0.8
VAT1-202ENST00000420567 GPSM2P81274 684 aa20.05■□□□□ 0.8
VAT1-202ENST00000420567 AOC3Q16853 763 aa20.05■□□□□ 0.8
VAT1-202ENST00000420567 EPHA10Q5JZY3 1008 aa20.05■□□□□ 0.8
VAT1-202ENST00000420567 LARGE2Q8N3Y3 721 aa20.05■□□□□ 0.8
VAT1-202ENST00000420567 CDC5LQ99459 802 aaKnown RBP20.05■□□□□ 0.8
VAT1-202ENST00000420567 NSFL1CQ9UNZ2 370 aaKnown RBP20.05■□□□□ 0.8
VAT1-202ENST00000420567 RTL9Q8NET4 1388 aa20.05■□□□□ 0.8
VAT1-202ENST00000420567 ZNF541Q9H0D2 1346 aa20.04■□□□□ 0.8
VAT1-202ENST00000420567 PPIP5K2O43314 1243 aa20.04■□□□□ 0.8
VAT1-202ENST00000420567 CSF1RP07333 972 aa20.04■□□□□ 0.8
VAT1-202ENST00000420567 NBPF7P0C2Y1 421 aaPredicted RBP20.04■□□□□ 0.8
VAT1-202ENST00000420567 FOXO4P98177 505 aa20.04■□□□□ 0.8
VAT1-202ENST00000420567 SUPT20HQ8NEM7 779 aa20.04■□□□□ 0.8
VAT1-202ENST00000420567 JDP2Q8WYK2 163 aa20.04■□□□□ 0.8
VAT1-202ENST00000420567 SUCLG2Q96I99 432 aa20.04■□□□□ 0.8
VAT1-202ENST00000420567 RTFDC1Q9BY42 306 aaPredicted RBP20.04■□□□□ 0.8
VAT1-202ENST00000420567 API5Q9BZZ5 524 aaKnown RBP20.04■□□□□ 0.8
VAT1-202ENST00000420567 CHMP3Q9Y3E7 222 aa20.04■□□□□ 0.8
VAT1-202ENST00000420567 KIF3CO14782 793 aa20.03■□□□□ 0.8
VAT1-202ENST00000420567 ITGA6P23229 1130 aa20.03■□□□□ 0.8
VAT1-202ENST00000420567 DPY19L2Q6NUT2 758 aa20.03■□□□□ 0.8
VAT1-202ENST00000420567 RRAGCQ9HB90 399 aa20.03■□□□□ 0.8
VAT1-202ENST00000420567 DDNO94850 711 aaPredicted RBP20.02■□□□□ 0.8
VAT1-202ENST00000420567 FRAT1Q92837 279 aaPredicted RBP20.02■□□□□ 0.8
VAT1-202ENST00000420567 UTYO14607 1347 aa20.02■□□□□ 0.79
VAT1-202ENST00000420567 LMBR1LQ6UX01 489 aa20.01■□□□□ 0.79
VAT1-202ENST00000420567 NIM1KQ8IY84 436 aa20.01■□□□□ 0.79
VAT1-202ENST00000420567 GPR101Q96P66 508 aaPredicted RBP20.01■□□□□ 0.79
VAT1-202ENST00000420567 ANKIB1Q9P2G1 1089 aa20.01■□□□□ 0.79
VAT1-202ENST00000420567 POLLQ9UGP5 575 aa20.01■□□□□ 0.79
VAT1-202ENST00000420567 CCDC88AQ3V6T2 1871 aa20.01■□□□□ 0.79
VAT1-202ENST00000420567 ANKRD18BA2A2Z9 1011 aa20■□□□□ 0.79
VAT1-202ENST00000420567 C6orf229H3BNL8 230 aa20■□□□□ 0.79
VAT1-202ENST00000420567 FZD9O00144 591 aa20■□□□□ 0.79
VAT1-202ENST00000420567 IGHMBP2P38935 993 aaKnown RBP20■□□□□ 0.79
VAT1-202ENST00000420567 CCT4P50991 539 aaKnown RBP20■□□□□ 0.79
VAT1-202ENST00000420567 KAZALD1Q96I82 304 aa20■□□□□ 0.79
VAT1-202ENST00000420567 TNNQ9UQP3 1299 aa20■□□□□ 0.79
VAT1-202ENST00000420567 RIMBP2O15034 1052 aa19.99■□□□□ 0.79
VAT1-202ENST00000420567 UFL1O94874 794 aa19.99■□□□□ 0.79
VAT1-202ENST00000420567 KIAA2012Q0VF49 1180 aa19.99■□□□□ 0.79
VAT1-202ENST00000420567 TBC1D16Q8TBP0 767 aa19.99■□□□□ 0.79
VAT1-202ENST00000420567 ARHGAP45Q92619 1136 aa19.99■□□□□ 0.79
VAT1-202ENST00000420567 USP44Q9H0E7 712 aa19.99■□□□□ 0.79
VAT1-202ENST00000420567 BSDC1Q9NW68 430 aaPredicted RBP19.99■□□□□ 0.79
VAT1-202ENST00000420567 DICER1Q9UPY3 1922 aaKnown RBP19.98■□□□□ 0.79
VAT1-202ENST00000420567 EIF6P56537 245 aaKnown RBP19.98■□□□□ 0.79
VAT1-202ENST00000420567 IFIT5Q13325 482 aaKnown RBP19.98■□□□□ 0.79
VAT1-202ENST00000420567 VPS33BQ9H267 617 aa19.98■□□□□ 0.79
VAT1-202ENST00000420567 PODXL2Q9NZ53 605 aa19.98■□□□□ 0.79
VAT1-202ENST00000420567 LTBP1Q14766 1721 aa19.98■□□□□ 0.79
VAT1-202ENST00000420567 XDHP47989 1333 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms