RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 HSP90B1P14625 803 aaKnown RBP23.19■■□□□ 1.3
ECHDC3-202ENST00000420401 HOXA10P31260 410 aaPredicted RBP23.19■■□□□ 1.3
ECHDC3-202ENST00000420401 SYNE4Q8N205 404 aa23.19■■□□□ 1.3
ECHDC3-202ENST00000420401 ZBTB38Q8NAP3 1195 aaPredicted RBP23.19■■□□□ 1.3
ECHDC3-202ENST00000420401 DNAAF4Q8WXU2 420 aa23.18■■□□□ 1.3
ECHDC3-202ENST00000420401 CACNA1FO60840 1977 aa23.18■■□□□ 1.3
ECHDC3-202ENST00000420401 FOXN1O15353 648 aa23.17■■□□□ 1.3
ECHDC3-202ENST00000420401 C3orf67Q6ZVT6 689 aa23.17■■□□□ 1.3
ECHDC3-202ENST00000420401 AIDAQ96BJ3 306 aa23.17■■□□□ 1.3
ECHDC3-202ENST00000420401 CNTNAP1P78357 1384 aa23.16■■□□□ 1.3
ECHDC3-202ENST00000420401 IRS4O14654 1257 aaPredicted RBP23.16■■□□□ 1.3
ECHDC3-202ENST00000420401 IGKV5-2P06315 115 aa23.16■■□□□ 1.3
ECHDC3-202ENST00000420401 ALDH1L2Q3SY69 923 aa23.16■■□□□ 1.3
ECHDC3-202ENST00000420401 RTL5Q5HYW3 569 aaPredicted RBP23.16■■□□□ 1.3
ECHDC3-202ENST00000420401 LDHDQ86WU2 507 aa23.16■■□□□ 1.3
ECHDC3-202ENST00000420401 MRPL50Q8N5N7 158 aaKnown RBP23.16■■□□□ 1.3
ECHDC3-202ENST00000420401 CRAMP1Q96RY5 1269 aa23.16■■□□□ 1.3
ECHDC3-202ENST00000420401 PCCAP05165 728 aaPredicted RBP23.15■■□□□ 1.3
ECHDC3-202ENST00000420401 SSH1Q8WYL5 1049 aa23.15■■□□□ 1.3
ECHDC3-202ENST00000420401 NEURL1BA8MQ27 555 aa23.14■■□□□ 1.29
ECHDC3-202ENST00000420401 LINS1Q8NG48 757 aa23.14■■□□□ 1.29
ECHDC3-202ENST00000420401 PRDM10Q9NQV6 1147 aa23.14■■□□□ 1.29
ECHDC3-202ENST00000420401 CTCFP49711 727 aaPredicted RBP23.13■■□□□ 1.29
ECHDC3-202ENST00000420401 CWF19L2Q2TBE0 894 aaKnown RBP23.13■■□□□ 1.29
ECHDC3-202ENST00000420401 EAPPQ56P03 285 aaPredicted RBP23.13■■□□□ 1.29
ECHDC3-202ENST00000420401 DDX46Q7L014 1031 aaKnown RBP23.13■■□□□ 1.29
ECHDC3-202ENST00000420401 C7orf43Q8WVR3 580 aa23.13■■□□□ 1.29
ECHDC3-202ENST00000420401 ZBED9Q6R2W3 1325 aa23.12■■□□□ 1.29
ECHDC3-202ENST00000420401 PASKQ96RG2 1323 aa23.12■■□□□ 1.29
ECHDC3-202ENST00000420401 TMEM88BA6NKF7 163 aa23.12■■□□□ 1.29
ECHDC3-202ENST00000420401 F6X3S4 739 aa23.12■■□□□ 1.29
ECHDC3-202ENST00000420401 SF3B3Q15393 1217 aaKnown RBP23.12■■□□□ 1.29
ECHDC3-202ENST00000420401 CCDC93Q567U6 631 aa23.12■■□□□ 1.29
ECHDC3-202ENST00000420401 TAF1DQ9H5J8 278 aaPredicted RBP23.12■■□□□ 1.29
ECHDC3-202ENST00000420401 SMC4Q9NTJ3 1288 aa23.12■■□□□ 1.29
ECHDC3-202ENST00000420401 CLEC11AQ9Y240 323 aa23.12■■□□□ 1.29
ECHDC3-202ENST00000420401 PTPRCP08575 1304 aa23.11■■□□□ 1.29
ECHDC3-202ENST00000420401 GCKRQ14397 625 aa23.11■■□□□ 1.29
ECHDC3-202ENST00000420401 CC2D2BQ6DHV5 1058 aa23.11■■□□□ 1.29
ECHDC3-202ENST00000420401 RTKN2Q8IZC4 609 aa23.11■■□□□ 1.29
ECHDC3-202ENST00000420401 L3MBTL3Q96JM7 780 aaPredicted RBP23.11■■□□□ 1.29
ECHDC3-202ENST00000420401 TMX4Q9H1E5 349 aaPredicted RBP23.11■■□□□ 1.29
ECHDC3-202ENST00000420401 CDHR2Q9BYE9 1310 aa23.1■■□□□ 1.29
ECHDC3-202ENST00000420401 BBOX1O75936 387 aa23.1■■□□□ 1.29
ECHDC3-202ENST00000420401 VEGFBP49765 207 aa23.1■■□□□ 1.29
ECHDC3-202ENST00000420401 JARID2Q92833 1246 aaPredicted RBP23.1■■□□□ 1.29
ECHDC3-202ENST00000420401 BCL2L13Q9BXK5 485 aa23.1■■□□□ 1.29
ECHDC3-202ENST00000420401 ABCC4O15439 1325 aa23.09■■□□□ 1.29
ECHDC3-202ENST00000420401 PPEF1O14829 653 aaPredicted RBP23.09■■□□□ 1.29
ECHDC3-202ENST00000420401 PDE8AO60658 829 aa23.09■■□□□ 1.29
ECHDC3-202ENST00000420401 GRIPAP1Q4V328 841 aa23.09■■□□□ 1.29
ECHDC3-202ENST00000420401 BEND3Q5T5X7 828 aa23.09■■□□□ 1.29
ECHDC3-202ENST00000420401 H7C1W4 665 aa23.08■■□□□ 1.29
ECHDC3-202ENST00000420401 SLC4A10Q6U841 1118 aa23.08■■□□□ 1.29
ECHDC3-202ENST00000420401 HACL1Q9UJ83 578 aa23.08■■□□□ 1.29
ECHDC3-202ENST00000420401 GRAPQ13588 217 aa23.07■■□□□ 1.28
ECHDC3-202ENST00000420401 GRAPLQ8TC17 118 aaPredicted RBP23.07■■□□□ 1.28
ECHDC3-202ENST00000420401 ITGBL1O95965 494 aaPredicted RBP23.06■■□□□ 1.28
ECHDC3-202ENST00000420401 FKBP4Q02790 459 aaKnown RBP eCLIP23.06■■□□□ 1.28
ECHDC3-202ENST00000420401 CCDC152Q4G0S7 254 aa23.06■■□□□ 1.28
ECHDC3-202ENST00000420401 UBE3BQ7Z3V4 1068 aa23.06■■□□□ 1.28
ECHDC3-202ENST00000420401 SRCIN1Q9C0H9 1055 aa23.06■■□□□ 1.28
ECHDC3-202ENST00000420401 ZNF277Q9NRM2 450 aaPredicted RBP23.06■■□□□ 1.28
ECHDC3-202ENST00000420401 ATP6V0A2Q9Y487 856 aa23.06■■□□□ 1.28
ECHDC3-202ENST00000420401 ALDH1L1O75891 902 aa23.05■■□□□ 1.28
ECHDC3-202ENST00000420401 EPHX2P34913 555 aa23.05■■□□□ 1.28
ECHDC3-202ENST00000420401 LBX1P52954 281 aa23.05■■□□□ 1.28
ECHDC3-202ENST00000420401 RARSP54136 660 aaKnown RBP23.05■■□□□ 1.28
ECHDC3-202ENST00000420401 BRPF1P55201 1214 aaPredicted RBP23.05■■□□□ 1.28
ECHDC3-202ENST00000420401 OLFM4Q6UX06 510 aa23.05■■□□□ 1.28
ECHDC3-202ENST00000420401 TMC4Q7Z404 712 aa23.05■■□□□ 1.28
ECHDC3-202ENST00000420401 PNMA8AQ86V59 439 aaPredicted RBP23.05■■□□□ 1.28
ECHDC3-202ENST00000420401 ZNF541Q9H0D2 1346 aa23.05■■□□□ 1.28
ECHDC3-202ENST00000420401 DDX60Q8IY21 1712 aaKnown RBP23.05■■□□□ 1.28
ECHDC3-202ENST00000420401 DEFB115Q30KQ5 88 aa23.04■■□□□ 1.28
ECHDC3-202ENST00000420401 SP8Q8IXZ3 490 aa23.04■■□□□ 1.28
ECHDC3-202ENST00000420401 WBP1LQ9NX94 342 aa23.04■■□□□ 1.28
ECHDC3-202ENST00000420401 LAMB2P55268 1798 aa23.02■■□□□ 1.28
ECHDC3-202ENST00000420401 CTSWP56202 376 aa23.02■■□□□ 1.28
ECHDC3-202ENST00000420401 CNTROBQ8N137 903 aa23.02■■□□□ 1.28
ECHDC3-202ENST00000420401 PSMD1Q99460 953 aa23.02■■□□□ 1.28
ECHDC3-202ENST00000420401 PLA2G12BQ9BX93 195 aa23.02■■□□□ 1.28
ECHDC3-202ENST00000420401 C9orf78Q9NZ63 289 aaPredicted RBP23.02■■□□□ 1.28
ECHDC3-202ENST00000420401 NOB1Q9ULX3 412 aaKnown RBP23.02■■□□□ 1.28
ECHDC3-202ENST00000420401 CASP7P55210 303 aa23.01■■□□□ 1.27
ECHDC3-202ENST00000420401 MAP1SQ66K74 1059 aaPredicted RBP23.01■■□□□ 1.27
ECHDC3-202ENST00000420401 CELF1Q92879 486 aaKnown RBP23.01■■□□□ 1.27
ECHDC3-202ENST00000420401 ABT1Q9ULW3 272 aaKnown RBP23.01■■□□□ 1.27
ECHDC3-202ENST00000420401 ADAMTSL1Q8N6G6 1762 aa23■■□□□ 1.27
ECHDC3-202ENST00000420401 GRM8O00222 908 aa23■■□□□ 1.27
ECHDC3-202ENST00000420401 IARSP41252 1262 aaKnown RBP23■■□□□ 1.27
ECHDC3-202ENST00000420401 RPS8P62241 208 aaKnown RBP23■■□□□ 1.27
ECHDC3-202ENST00000420401 TTLL11Q8NHH1 800 aa23■■□□□ 1.27
ECHDC3-202ENST00000420401 CCDC85AQ96PX6 553 aaPredicted RBP23■■□□□ 1.27
ECHDC3-202ENST00000420401 API5Q9BZZ5 524 aaKnown RBP23■■□□□ 1.27
ECHDC3-202ENST00000420401 RASSF10A6NK89 507 aa22.99■■□□□ 1.27
ECHDC3-202ENST00000420401 MAP2K1Q02750 393 aaPredicted RBP22.99■■□□□ 1.27
ECHDC3-202ENST00000420401 KIF16BQ96L93 1317 aa22.99■■□□□ 1.27
ECHDC3-202ENST00000420401 FZD9O00144 591 aa22.98■■□□□ 1.27
ECHDC3-202ENST00000420401 GPC2Q8N158 579 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms