RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 TNNQ9UQP3 1299 aa26.07■■□□□ 1.76
HMGXB4-203ENST00000420166 C21orf2O43822 256 aa26.06■■□□□ 1.76
HMGXB4-203ENST00000420166 CCDC152Q4G0S7 254 aa26.06■■□□□ 1.76
HMGXB4-203ENST00000420166 C7orf43Q8WVR3 580 aa26.06■■□□□ 1.76
HMGXB4-203ENST00000420166 ZNF219Q9P2Y4 722 aaPredicted RBP26.06■■□□□ 1.76
HMGXB4-203ENST00000420166 UTYO14607 1347 aa26.06■■□□□ 1.76
HMGXB4-203ENST00000420166 FER1L6Q2WGJ9 1857 aa26.05■■□□□ 1.76
HMGXB4-203ENST00000420166 GRAPQ13588 217 aa26.04■■□□□ 1.76
HMGXB4-203ENST00000420166 INTS3Q68E01 1043 aaKnown RBP26.04■■□□□ 1.76
HMGXB4-203ENST00000420166 ARHGAP27Q6ZUM4 889 aa26.04■■□□□ 1.76
HMGXB4-203ENST00000420166 TTLL11Q8NHH1 800 aa26.04■■□□□ 1.76
HMGXB4-203ENST00000420166 GRAPLQ8TC17 118 aaPredicted RBP26.04■■□□□ 1.76
HMGXB4-203ENST00000420166 CLUAP1Q96AJ1 413 aa26.04■■□□□ 1.76
HMGXB4-203ENST00000420166 USP44Q9H0E7 712 aa26.04■■□□□ 1.76
HMGXB4-203ENST00000420166 COL4A1P02462 1669 aa26.03■■□□□ 1.76
HMGXB4-203ENST00000420166 PPEF1O14829 653 aaPredicted RBP26.03■■□□□ 1.76
HMGXB4-203ENST00000420166 NBPF7P0C2Y1 421 aaPredicted RBP26.03■■□□□ 1.76
HMGXB4-203ENST00000420166 SOGA3Q5TF21 947 aa26.03■■□□□ 1.76
HMGXB4-203ENST00000420166 CCDC85AQ96PX6 553 aaPredicted RBP26.03■■□□□ 1.76
HMGXB4-203ENST00000420166 RTL9Q8NET4 1388 aa26.02■■□□□ 1.76
HMGXB4-203ENST00000420166 BBOX1O75936 387 aa26.01■■□□□ 1.75
HMGXB4-203ENST00000420166 FOXO4P98177 505 aa26.01■■□□□ 1.75
HMGXB4-203ENST00000420166 SUCLG2Q96I99 432 aa26.01■■□□□ 1.75
HMGXB4-203ENST00000420166 SBF1O95248 1867 aa26■■□□□ 1.75
HMGXB4-203ENST00000420166 CSF1RP07333 972 aa26■■□□□ 1.75
HMGXB4-203ENST00000420166 CCDC93Q567U6 631 aa26■■□□□ 1.75
HMGXB4-203ENST00000420166 OLFM4Q6UX06 510 aa26■■□□□ 1.75
HMGXB4-203ENST00000420166 CELF1Q92879 486 aaKnown RBP26■■□□□ 1.75
HMGXB4-203ENST00000420166 GREM2Q9H772 168 aa26■■□□□ 1.75
HMGXB4-203ENST00000420166 SEC31BQ9NQW1 1179 aa26■■□□□ 1.75
HMGXB4-203ENST00000420166 EPHA10Q5JZY3 1008 aa25.99■■□□□ 1.75
HMGXB4-203ENST00000420166 FTSJ3Q8IY81 847 aaKnown RBP25.99■■□□□ 1.75
HMGXB4-203ENST00000420166 DZIP1LQ8IYY4 767 aaKnown RBP25.99■■□□□ 1.75
HMGXB4-203ENST00000420166 LRRC37AA6NMS7 1700 aa25.99■■□□□ 1.75
HMGXB4-203ENST00000420166 SNED1Q8TER0 1413 aa25.98■■□□□ 1.75
HMGXB4-203ENST00000420166 SPEF2Q9C093 1822 aa25.98■■□□□ 1.75
HMGXB4-203ENST00000420166 NFKBIEO00221 500 aa25.98■■□□□ 1.75
HMGXB4-203ENST00000420166 CC2D2BQ6DHV5 1058 aa25.98■■□□□ 1.75
HMGXB4-203ENST00000420166 TMC4Q7Z404 712 aa25.98■■□□□ 1.75
HMGXB4-203ENST00000420166 TMEM57Q8N5G2 664 aa25.98■■□□□ 1.75
HMGXB4-203ENST00000420166 KAZALD1Q96I82 304 aa25.98■■□□□ 1.75
HMGXB4-203ENST00000420166 ATP6V0A2Q9Y487 856 aa25.98■■□□□ 1.75
HMGXB4-203ENST00000420166 CCDC88AQ3V6T2 1871 aa25.98■■□□□ 1.75
HMGXB4-203ENST00000420166 RLBP1P12271 317 aa25.97■■□□□ 1.75
HMGXB4-203ENST00000420166 RPS8P62241 208 aaKnown RBP25.97■■□□□ 1.75
HMGXB4-203ENST00000420166 RASSF7Q02833 373 aa25.97■■□□□ 1.75
HMGXB4-203ENST00000420166 FAM161AQ3B820 660 aa25.97■■□□□ 1.75
HMGXB4-203ENST00000420166 SLC51AQ86UW1 340 aa25.97■■□□□ 1.75
HMGXB4-203ENST00000420166 LMBR1LQ6UX01 489 aa25.96■■□□□ 1.75
HMGXB4-203ENST00000420166 RTKN2Q8IZC4 609 aa25.96■■□□□ 1.75
HMGXB4-203ENST00000420166 CDC5LQ99459 802 aaKnown RBP25.96■■□□□ 1.75
HMGXB4-203ENST00000420166 LTBP3Q9NS15 1303 aa25.95■■□□□ 1.75
HMGXB4-203ENST00000420166 UBTFL1P0CB47 393 aaPredicted RBP25.95■■□□□ 1.74
HMGXB4-203ENST00000420166 ANKRD18AQ8IVF6 992 aa25.95■■□□□ 1.74
HMGXB4-203ENST00000420166 SP8Q8IXZ3 490 aa25.95■■□□□ 1.74
HMGXB4-203ENST00000420166 MEIS3Q99687 375 aa25.95■■□□□ 1.74
HMGXB4-203ENST00000420166 BICC1Q9H694 974 aaKnown RBP25.95■■□□□ 1.74
HMGXB4-203ENST00000420166 ITGA6P23229 1130 aa25.94■■□□□ 1.74
HMGXB4-203ENST00000420166 GRIPAP1Q4V328 841 aa25.94■■□□□ 1.74
HMGXB4-203ENST00000420166 TMX4Q9H1E5 349 aaPredicted RBP25.94■■□□□ 1.74
HMGXB4-203ENST00000420166 TAOK3Q9H2K8 898 aa25.94■■□□□ 1.74
HMGXB4-203ENST00000420166 UTRNP46939 3433 aa25.93■■□□□ 1.74
HMGXB4-203ENST00000420166 PLIN1O60240 522 aa25.93■■□□□ 1.74
HMGXB4-203ENST00000420166 MS4A1P11836 297 aa25.93■■□□□ 1.74
HMGXB4-203ENST00000420166 RABL6Q3YEC7 729 aaPredicted RBP25.93■■□□□ 1.74
HMGXB4-203ENST00000420166 ANKRD44Q8N8A2 993 aa25.93■■□□□ 1.74
HMGXB4-203ENST00000420166 CHMP3Q9Y3E7 222 aa25.93■■□□□ 1.74
HMGXB4-203ENST00000420166 GNAI3P08754 354 aa25.92■■□□□ 1.74
HMGXB4-203ENST00000420166 FKBP4Q02790 459 aaKnown RBP eCLIP25.92■■□□□ 1.74
HMGXB4-203ENST00000420166 HDAC5Q9UQL6 1122 aa25.92■■□□□ 1.74
HMGXB4-203ENST00000420166 DICER1Q9UPY3 1922 aaKnown RBP25.92■■□□□ 1.74
HMGXB4-203ENST00000420166 ANKRD18BA2A2Z9 1011 aa25.91■■□□□ 1.74
HMGXB4-203ENST00000420166 IFIT5Q13325 482 aaKnown RBP25.91■■□□□ 1.74
HMGXB4-203ENST00000420166 ITPRIPQ8IWB1 547 aa25.91■■□□□ 1.74
HMGXB4-203ENST00000420166 PANK1Q8TE04 598 aa25.91■■□□□ 1.74
HMGXB4-203ENST00000420166 LMNB1P20700 586 aa25.9■■□□□ 1.74
HMGXB4-203ENST00000420166 PRELPP51888 382 aa25.9■■□□□ 1.74
HMGXB4-203ENST00000420166 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.9■■□□□ 1.74
HMGXB4-203ENST00000420166 PSMD1Q99460 953 aa25.9■■□□□ 1.74
HMGXB4-203ENST00000420166 LTBP1Q14766 1721 aa25.89■■□□□ 1.74
HMGXB4-203ENST00000420166 IGHMBP2P38935 993 aaKnown RBP25.89■■□□□ 1.74
HMGXB4-203ENST00000420166 CCDC57Q2TAC2 916 aa25.89■■□□□ 1.74
HMGXB4-203ENST00000420166 C9orf131Q5VYM1 1079 aa25.89■■□□□ 1.74
HMGXB4-203ENST00000420166 BSDC1Q9NW68 430 aaPredicted RBP25.88■■□□□ 1.73
HMGXB4-203ENST00000420166 RNF181Q9P0P0 153 aa25.88■■□□□ 1.73
HMGXB4-203ENST00000420166 LRRFIP2Q9Y608 721 aaKnown RBP25.88■■□□□ 1.73
HMGXB4-203ENST00000420166 DUOX1Q9NRD9 1551 aa25.87■■□□□ 1.73
HMGXB4-203ENST00000420166 DPP8Q6V1X1 898 aaPredicted RBP25.87■■□□□ 1.73
HMGXB4-203ENST00000420166 MPNDQ8N594 471 aa25.87■■□□□ 1.73
HMGXB4-203ENST00000420166 TIAM2Q8IVF5 1701 aa25.86■■□□□ 1.73
HMGXB4-203ENST00000420166 RTFDC1Q9BY42 306 aaPredicted RBP25.86■■□□□ 1.73
HMGXB4-203ENST00000420166 ZNF277Q9NRM2 450 aaPredicted RBP25.86■■□□□ 1.73
HMGXB4-203ENST00000420166 GPSM2P81274 684 aa25.85■■□□□ 1.73
HMGXB4-203ENST00000420166 TAF7LQ5H9L4 462 aa25.85■■□□□ 1.73
HMGXB4-203ENST00000420166 MPHOSPH8Q99549 860 aa25.85■■□□□ 1.73
HMGXB4-203ENST00000420166 YY1P25490 414 aa25.84■■□□□ 1.73
HMGXB4-203ENST00000420166 PDE3AQ14432 1141 aa25.84■■□□□ 1.73
HMGXB4-203ENST00000420166 NSFL1CQ9UNZ2 370 aaKnown RBP25.84■■□□□ 1.73
HMGXB4-203ENST00000420166 A0A1B0GUL6 1792 aa25.83■■□□□ 1.73
HMGXB4-203ENST00000420166 ZBTB7BO15156 539 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms