RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CTSWP56202 376 aa17.67■□□□□ 0.42
SHMT1P1-201ENST00000419974 PTPN12Q05209 780 aaKnown RBP17.67■□□□□ 0.42
SHMT1P1-201ENST00000419974 TTLL11Q8NHH1 800 aa17.67■□□□□ 0.42
SHMT1P1-201ENST00000419974 KIF1BPQ96EK5 621 aa17.67■□□□□ 0.42
SHMT1P1-201ENST00000419974 CIAO1O76071 339 aa17.66■□□□□ 0.42
SHMT1P1-201ENST00000419974 PHF14O94880 888 aa17.66■□□□□ 0.42
SHMT1P1-201ENST00000419974 SF3B3Q15393 1217 aaKnown RBP17.66■□□□□ 0.42
SHMT1P1-201ENST00000419974 ANKRD45Q5TZF3 282 aa17.66■□□□□ 0.42
SHMT1P1-201ENST00000419974 LRRCC1Q9C099 1032 aa17.66■□□□□ 0.42
SHMT1P1-201ENST00000419974 SURF6O75683 361 aaKnown RBP17.65■□□□□ 0.42
SHMT1P1-201ENST00000419974 NFIXQ14938 502 aa17.65■□□□□ 0.42
SHMT1P1-201ENST00000419974 LAMB2P55268 1798 aa17.65■□□□□ 0.42
SHMT1P1-201ENST00000419974 SMIM5Q71RC9 77 aa17.64■□□□□ 0.41
SHMT1P1-201ENST00000419974 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
SHMT1P1-201ENST00000419974 OSBPL3Q9H4L5 887 aa17.64■□□□□ 0.41
SHMT1P1-201ENST00000419974 YY1P25490 414 aa17.63■□□□□ 0.41
SHMT1P1-201ENST00000419974 CCDC57Q2TAC2 916 aa17.63■□□□□ 0.41
SHMT1P1-201ENST00000419974 RHPN1Q8TCX5 695 aa17.63■□□□□ 0.41
SHMT1P1-201ENST00000419974 EXOC6BQ9Y2D4 811 aa17.63■□□□□ 0.41
SHMT1P1-201ENST00000419974 PDE4AP27815 886 aa17.62■□□□□ 0.41
SHMT1P1-201ENST00000419974 G3BP1Q13283 466 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHMT1P1-201ENST00000419974 IFIT5Q13325 482 aaKnown RBP17.62■□□□□ 0.41
SHMT1P1-201ENST00000419974 CCDC152Q4G0S7 254 aa17.62■□□□□ 0.41
SHMT1P1-201ENST00000419974 NBPF5PQ86XG9 351 aaPredicted RBP17.62■□□□□ 0.41
SHMT1P1-201ENST00000419974 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
SHMT1P1-201ENST00000419974 GPR108Q9NPR9 543 aa17.62■□□□□ 0.41
SHMT1P1-201ENST00000419974 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
SHMT1P1-201ENST00000419974 CD2APQ9Y5K6 639 aa17.62■□□□□ 0.41
SHMT1P1-201ENST00000419974 SALL3Q9BXA9 1300 aa17.61■□□□□ 0.41
SHMT1P1-201ENST00000419974 IL15P40933 162 aaPredicted RBP17.61■□□□□ 0.41
SHMT1P1-201ENST00000419974 MSL1Q68DK7 614 aa17.61■□□□□ 0.41
SHMT1P1-201ENST00000419974 LNPKQ9C0E8 428 aa17.61■□□□□ 0.41
SHMT1P1-201ENST00000419974 KLRG2A4D1S0 409 aaPredicted RBP17.6■□□□□ 0.41
SHMT1P1-201ENST00000419974 POLRMTO00411 1230 aaKnown RBP17.6■□□□□ 0.41
SHMT1P1-201ENST00000419974 ERFEQ4G0M1 354 aa17.6■□□□□ 0.41
SHMT1P1-201ENST00000419974 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
SHMT1P1-201ENST00000419974 STAP2Q9UGK3 403 aa17.6■□□□□ 0.41
SHMT1P1-201ENST00000419974 DDX60Q8IY21 1712 aaKnown RBP17.6■□□□□ 0.41
SHMT1P1-201ENST00000419974 AOX1Q06278 1338 aa17.59■□□□□ 0.41
SHMT1P1-201ENST00000419974 GOLGB1Q14789 3259 aaKnown RBP17.59■□□□□ 0.41
SHMT1P1-201ENST00000419974 ANKRD18BA2A2Z9 1011 aa17.59■□□□□ 0.41
SHMT1P1-201ENST00000419974 EYA2O00167 538 aa17.59■□□□□ 0.41
SHMT1P1-201ENST00000419974 SASH1O94885 1247 aa17.59■□□□□ 0.41
SHMT1P1-201ENST00000419974 ITGA6P23229 1130 aa17.59■□□□□ 0.41
SHMT1P1-201ENST00000419974 FAM161AQ3B820 660 aa17.59■□□□□ 0.41
SHMT1P1-201ENST00000419974 ATG9AQ7Z3C6 839 aa17.59■□□□□ 0.41
SHMT1P1-201ENST00000419974 GREM2Q9H772 168 aa17.59■□□□□ 0.41
SHMT1P1-201ENST00000419974 PA2G4Q9UQ80 394 aaKnown RBP17.59■□□□□ 0.41
SHMT1P1-201ENST00000419974 NRXN2Q9P2S2 1712 aa17.58■□□□□ 0.41
SHMT1P1-201ENST00000419974 HCLS1P14317 486 aaPredicted RBP17.58■□□□□ 0.4
SHMT1P1-201ENST00000419974 NUTM1Q86Y26 1132 aa17.58■□□□□ 0.4
SHMT1P1-201ENST00000419974 PLEKHM2Q8IWE5 1019 aa17.58■□□□□ 0.4
SHMT1P1-201ENST00000419974 CLASRPQ8N2M8 674 aaKnown RBP17.58■□□□□ 0.4
SHMT1P1-201ENST00000419974 CNBD1Q8NA66 436 aa17.58■□□□□ 0.4
SHMT1P1-201ENST00000419974 NLRP3Q96P20 1036 aa17.58■□□□□ 0.4
SHMT1P1-201ENST00000419974 MYH3P11055 1940 aa17.58■□□□□ 0.4
SHMT1P1-201ENST00000419974 SERPINB2P05120 415 aa17.57■□□□□ 0.4
SHMT1P1-201ENST00000419974 GTF2E1P29083 439 aaPredicted RBP17.57■□□□□ 0.4
SHMT1P1-201ENST00000419974 CRY2Q49AN0 593 aa17.57■□□□□ 0.4
SHMT1P1-201ENST00000419974 PRR5LQ6MZQ0 368 aa17.57■□□□□ 0.4
SHMT1P1-201ENST00000419974 BICDL1Q6ZP65 573 aa17.57■□□□□ 0.4
SHMT1P1-201ENST00000419974 KLHL34Q8N239 644 aa17.57■□□□□ 0.4
SHMT1P1-201ENST00000419974 NLGN2Q8NFZ4 835 aa17.57■□□□□ 0.4
SHMT1P1-201ENST00000419974 RIPOR2Q9Y4F9 1068 aa17.57■□□□□ 0.4
SHMT1P1-201ENST00000419974 ABCC12Q96J65 1359 aa17.57■□□□□ 0.4
SHMT1P1-201ENST00000419974 DDR1Q08345 913 aa17.56■□□□□ 0.4
SHMT1P1-201ENST00000419974 GPR162Q16538 588 aa17.56■□□□□ 0.4
SHMT1P1-201ENST00000419974 ST5P78524 1137 aa17.55■□□□□ 0.4
SHMT1P1-201ENST00000419974 BMP2KLQ5H9B9 411 aa17.55■□□□□ 0.4
SHMT1P1-201ENST00000419974 CDC5LQ99459 802 aaKnown RBP17.55■□□□□ 0.4
SHMT1P1-201ENST00000419974 TTC41PQ6P2S7 1318 aa17.55■□□□□ 0.4
SHMT1P1-201ENST00000419974 GRIN3BO60391 1043 aa17.54■□□□□ 0.4
SHMT1P1-201ENST00000419974 OS9Q13438 667 aaPredicted RBP17.54■□□□□ 0.4
SHMT1P1-201ENST00000419974 KLHDC4Q8TBB5 520 aa17.54■□□□□ 0.4
SHMT1P1-201ENST00000419974 BRIP1Q9BX63 1249 aa17.54■□□□□ 0.4
SHMT1P1-201ENST00000419974 CHMP3Q9Y3E7 222 aa17.54■□□□□ 0.4
SHMT1P1-201ENST00000419974 MROH5Q6ZUA9 1318 aa17.54■□□□□ 0.4
SHMT1P1-201ENST00000419974 CHD4Q14839 1912 aa17.53■□□□□ 0.4
SHMT1P1-201ENST00000419974 FAM177BA6PVY3 158 aa17.53■□□□□ 0.4
SHMT1P1-201ENST00000419974 SMARCA5O60264 1052 aaPredicted RBP17.53■□□□□ 0.4
SHMT1P1-201ENST00000419974 RGS3P49796 1198 aa17.53■□□□□ 0.4
SHMT1P1-201ENST00000419974 PDE1AP54750 535 aa17.53■□□□□ 0.4
SHMT1P1-201ENST00000419974 LDHAL6AQ6ZMR3 332 aa17.53■□□□□ 0.4
SHMT1P1-201ENST00000419974 MX1P20591 662 aa17.52■□□□□ 0.4
SHMT1P1-201ENST00000419974 HOXA10P31260 410 aaPredicted RBP17.52■□□□□ 0.4
SHMT1P1-201ENST00000419974 TAF7LQ5H9L4 462 aa17.52■□□□□ 0.4
SHMT1P1-201ENST00000419974 SKAP1Q86WV1 359 aa17.52■□□□□ 0.4
SHMT1P1-201ENST00000419974 C16orf71Q8IYS4 520 aaPredicted RBP17.52■□□□□ 0.4
SHMT1P1-201ENST00000419974 VGLL2Q8N8G2 317 aa17.52■□□□□ 0.4
SHMT1P1-201ENST00000419974 SIL1Q9H173 461 aa17.52■□□□□ 0.4
SHMT1P1-201ENST00000419974 BSDC1Q9NW68 430 aaPredicted RBP17.52■□□□□ 0.4
SHMT1P1-201ENST00000419974 AKAP2Q9Y2D5 859 aa17.52■□□□□ 0.4
SHMT1P1-201ENST00000419974 PARP3Q9Y6F1 533 aa17.52■□□□□ 0.4
SHMT1P1-201ENST00000419974 ZBTB22O15209 634 aa17.51■□□□□ 0.39
SHMT1P1-201ENST00000419974 MMP10P09238 476 aa17.51■□□□□ 0.39
SHMT1P1-201ENST00000419974 LRRC24Q50LG9 513 aa17.51■□□□□ 0.39
SHMT1P1-201ENST00000419974 TNNI3KQ59H18 835 aa17.51■□□□□ 0.39
SHMT1P1-201ENST00000419974 C3orf67Q6ZVT6 689 aa17.51■□□□□ 0.39
SHMT1P1-201ENST00000419974 EAF2Q96CJ1 260 aaPredicted RBP17.51■□□□□ 0.39
SHMT1P1-201ENST00000419974 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms